RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 LINC01465Q8N7H1 131 aa11.77□□□□□ -0.53
TMEM260-206ENST00000555046 DBF4BQ8NFT6 615 aa11.77□□□□□ -0.53
TMEM260-206ENST00000555046 PRPF31Q8WWY3 499 aaKnown RBP11.77□□□□□ -0.53
TMEM260-206ENST00000555046 PYM1Q9BRP8 204 aaKnown RBP11.77□□□□□ -0.53
TMEM260-206ENST00000555046 RCOR1Q9UKL0 485 aa11.77□□□□□ -0.53
TMEM260-206ENST00000555046 CIZ1Q9ULV3 898 aaPredicted RBP11.77□□□□□ -0.53
TMEM260-206ENST00000555046 BRWD1Q9NSI6 2320 aa11.76□□□□□ -0.53
TMEM260-206ENST00000555046 ZBTB39O15060 712 aa11.76□□□□□ -0.53
TMEM260-206ENST00000555046 AMHP03971 560 aa11.76□□□□□ -0.53
TMEM260-206ENST00000555046 VTNP04004 478 aa11.76□□□□□ -0.53
TMEM260-206ENST00000555046 GHRP10912 638 aa11.76□□□□□ -0.53
TMEM260-206ENST00000555046 ZSCAN20P17040 1043 aaPredicted RBP11.76□□□□□ -0.53
TMEM260-206ENST00000555046 NCLP19338 710 aaKnown RBP11.76□□□□□ -0.53
TMEM260-206ENST00000555046 CDC25AP30304 524 aa11.76□□□□□ -0.53
TMEM260-206ENST00000555046 DDIT3P35638 169 aa11.76□□□□□ -0.53
TMEM260-206ENST00000555046 ME1P48163 572 aa11.76□□□□□ -0.53
TMEM260-206ENST00000555046 EPHB4P54760 987 aa11.76□□□□□ -0.53
TMEM260-206ENST00000555046 TMEM62Q0P6H9 643 aa11.76□□□□□ -0.53
TMEM260-206ENST00000555046 GPNMBQ14956 572 aa11.76□□□□□ -0.53
TMEM260-206ENST00000555046 PPP2R5AQ15172 486 aa11.76□□□□□ -0.53
TMEM260-206ENST00000555046 KIZQ2M2Z5 673 aa11.76□□□□□ -0.53
TMEM260-206ENST00000555046 POTEGQ6S5H5 508 aa11.76□□□□□ -0.53
TMEM260-206ENST00000555046 CCDC73Q6ZRK6 1079 aa11.76□□□□□ -0.53
TMEM260-206ENST00000555046 SRGAP1Q7Z6B7 1085 aa11.76□□□□□ -0.53
TMEM260-206ENST00000555046 RHPN2Q8IUC4 686 aa11.76□□□□□ -0.53
TMEM260-206ENST00000555046 KIFAP3Q92845 792 aa11.76□□□□□ -0.53
TMEM260-206ENST00000555046 ZBTB10Q96DT7 871 aa11.76□□□□□ -0.53
TMEM260-206ENST00000555046 IFT74Q96LB3 600 aa11.76□□□□□ -0.53
TMEM260-206ENST00000555046 SLC9A7Q96T83 725 aa11.76□□□□□ -0.53
TMEM260-206ENST00000555046 SH2D3AQ9BRG2 576 aa11.76□□□□□ -0.53
TMEM260-206ENST00000555046 MMTAG2Q9BU76 263 aaKnown RBP11.76□□□□□ -0.53
TMEM260-206ENST00000555046 LRRC27Q9C0I9 530 aa11.76□□□□□ -0.53
TMEM260-206ENST00000555046 CSRNP2Q9H175 543 aa11.76□□□□□ -0.53
TMEM260-206ENST00000555046 BHMT2Q9H2M3 363 aa11.76□□□□□ -0.53
TMEM260-206ENST00000555046 ADAMTS10Q9H324 1103 aa11.76□□□□□ -0.53
TMEM260-206ENST00000555046 C17orf75Q9HAS0 396 aa11.76□□□□□ -0.53
TMEM260-206ENST00000555046 CHST12Q9NRB3 414 aa11.76□□□□□ -0.53
TMEM260-206ENST00000555046 BMP2KQ9NSY1 1161 aaPredicted RBP11.76□□□□□ -0.53
TMEM260-206ENST00000555046 FBXO2Q9UK22 296 aaPredicted RBP11.76□□□□□ -0.53
TMEM260-206ENST00000555046 COL4A3BPQ9Y5P4 624 aa11.76□□□□□ -0.53
TMEM260-206ENST00000555046 ZFHX4Q86UP3 3567 aa11.75□□□□□ -0.53
TMEM260-206ENST00000555046 TMEM150BA6NC51 233 aa11.75□□□□□ -0.53
TMEM260-206ENST00000555046 SRGAP2CP0DJJ0 459 aa11.75□□□□□ -0.53
TMEM260-206ENST00000555046 DARSP14868 501 aaKnown RBP11.75□□□□□ -0.53
TMEM260-206ENST00000555046 ATP2A2P16615 1042 aaKnown RBP11.75□□□□□ -0.53
TMEM260-206ENST00000555046 SFPQP23246 707 aaKnown RBP eCLIP11.75□□□□□ -0.53
TMEM260-206ENST00000555046 DNAJB2P25686 324 aa11.75□□□□□ -0.53
TMEM260-206ENST00000555046 ARL2P36404 184 aa11.75□□□□□ -0.53
TMEM260-206ENST00000555046 GPC3P51654 580 aa11.75□□□□□ -0.53
TMEM260-206ENST00000555046 KCNQ1P51787 676 aa11.75□□□□□ -0.53
TMEM260-206ENST00000555046 DNM1Q05193 864 aaKnown RBP11.75□□□□□ -0.53
TMEM260-206ENST00000555046 LAMTOR4Q0VGL1 99 aa11.75□□□□□ -0.53
TMEM260-206ENST00000555046 NFX1Q12986 1120 aaKnown RBP11.75□□□□□ -0.53
TMEM260-206ENST00000555046 PKP1Q13835 747 aa11.75□□□□□ -0.53
TMEM260-206ENST00000555046 LPIN1Q14693 890 aa11.75□□□□□ -0.53
TMEM260-206ENST00000555046 MBTPS1Q14703 1052 aa11.75□□□□□ -0.53
TMEM260-206ENST00000555046 FOXD4L6Q3SYB3 417 aaPredicted RBP11.75□□□□□ -0.53
TMEM260-206ENST00000555046 FAM102BQ5T8I3 360 aa11.75□□□□□ -0.53
TMEM260-206ENST00000555046 RASIP1Q5U651 963 aa11.75□□□□□ -0.53
TMEM260-206ENST00000555046 RRAGBQ5VZM2 374 aa11.75□□□□□ -0.53
TMEM260-206ENST00000555046 FOXD4L3Q6VB84 417 aaPredicted RBP11.75□□□□□ -0.53
TMEM260-206ENST00000555046 SYT2Q8N9I0 419 aaPredicted RBP11.75□□□□□ -0.53
TMEM260-206ENST00000555046 TMEM143Q96AN5 459 aa11.75□□□□□ -0.53
TMEM260-206ENST00000555046 DRC1Q96MC2 740 aa11.75□□□□□ -0.53
TMEM260-206ENST00000555046 FAM13BQ9NYF5 915 aa11.75□□□□□ -0.53
TMEM260-206ENST00000555046 CXXC1Q9P0U4 656 aaPredicted RBP11.75□□□□□ -0.53
TMEM260-206ENST00000555046 STK17AQ9UEE5 414 aa11.75□□□□□ -0.53
TMEM260-206ENST00000555046 MSRAQ9UJ68 235 aa11.75□□□□□ -0.53
TMEM260-206ENST00000555046 PADI3Q9ULW8 664 aa11.75□□□□□ -0.53
TMEM260-206ENST00000555046 TPRP12270 2363 aaKnown RBP11.74□□□□□ -0.53
TMEM260-206ENST00000555046 PP2D1A8MPX8 630 aa11.74□□□□□ -0.53
TMEM260-206ENST00000555046 USO1O60763 962 aaKnown RBP11.74□□□□□ -0.53
TMEM260-206ENST00000555046 SSBP05455 408 aaKnown RBP eCLIP11.74□□□□□ -0.53
TMEM260-206ENST00000555046 PLA2G4BP0C869 781 aa11.74□□□□□ -0.53
TMEM260-206ENST00000555046 STAG3L1P0CL83 205 aa11.74□□□□□ -0.53
TMEM260-206ENST00000555046 SKIP12755 728 aa11.74□□□□□ -0.53
TMEM260-206ENST00000555046 SCP2P22307 547 aa11.74□□□□□ -0.53
TMEM260-206ENST00000555046 PHKA2P46019 1235 aa11.74□□□□□ -0.53
TMEM260-206ENST00000555046 AMPD3Q01432 767 aa11.74□□□□□ -0.53
TMEM260-206ENST00000555046 TFF2Q03403 129 aa11.74□□□□□ -0.53
TMEM260-206ENST00000555046 MKRN4PQ13434 485 aaPredicted RBP11.74□□□□□ -0.53
TMEM260-206ENST00000555046 ECM1Q16610 540 aa11.74□□□□□ -0.53
TMEM260-206ENST00000555046 CSPP1Q1MSJ5 1256 aa11.74□□□□□ -0.53
TMEM260-206ENST00000555046 RNF149Q8NC42 400 aa11.74□□□□□ -0.53
TMEM260-206ENST00000555046 SPATA32Q96LK8 384 aa11.74□□□□□ -0.53
TMEM260-206ENST00000555046 NLRP4Q96MN2 994 aa11.74□□□□□ -0.53
TMEM260-206ENST00000555046 GAS2L1Q99501 681 aaPredicted RBP11.74□□□□□ -0.53
TMEM260-206ENST00000555046 OSMRQ99650 979 aa11.74□□□□□ -0.53
TMEM260-206ENST00000555046 ZBED2Q9BTP6 218 aa11.74□□□□□ -0.53
TMEM260-206ENST00000555046 NFKBIZQ9BYH8 718 aa11.74□□□□□ -0.53
TMEM260-206ENST00000555046 C2orf40Q9H1Z8 148 aa11.74□□□□□ -0.53
TMEM260-206ENST00000555046 ZNF576Q9H609 170 aa11.74□□□□□ -0.53
TMEM260-206ENST00000555046 C1orf112Q9NSG2 853 aa11.74□□□□□ -0.53
TMEM260-206ENST00000555046 DACT1Q9NYF0 836 aa11.74□□□□□ -0.53
TMEM260-206ENST00000555046 ST3GAL5Q9UNP4 418 aa11.74□□□□□ -0.53
TMEM260-206ENST00000555046 ZDHHC9Q9Y397 364 aa11.74□□□□□ -0.53
TMEM260-206ENST00000555046 PHLPP2Q6ZVD8 1323 aa11.74□□□□□ -0.53
TMEM260-206ENST00000555046 A0A087WWV3 80 aa11.73□□□□□ -0.53
TMEM260-206ENST00000555046 A0A087WZ62 844 aa11.73□□□□□ -0.53
TMEM260-206ENST00000555046 DENND3A2RUS2 1198 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms