RNA–Protein interactions for RNA: ENST00000555022.5

SYNE2-217, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-217ENST00000555022 DDX25Q9UHL0 483 aaKnown RBP9.59□□□□□ -0.87
SYNE2-217ENST00000555022 FER1L4A9Z1Z3 1794 aa9.59□□□□□ -0.87
SYNE2-217ENST00000555022 RPTORQ8N122 1335 aa9.59□□□□□ -0.87
SYNE2-217ENST00000555022 CCDC169A6NNP5 214 aa9.58□□□□□ -0.88
SYNE2-217ENST00000555022 SPOPO43791 374 aa9.58□□□□□ -0.88
SYNE2-217ENST00000555022 SMNDC1O75940 238 aaKnown RBP eCLIP9.58□□□□□ -0.88
SYNE2-217ENST00000555022 SUN1O94901 812 aa9.58□□□□□ -0.88
SYNE2-217ENST00000555022 ETS2P15036 469 aa9.58□□□□□ -0.88
SYNE2-217ENST00000555022 ATP4AP20648 1035 aa9.58□□□□□ -0.88
SYNE2-217ENST00000555022 LRRC63Q05C16 580 aa9.58□□□□□ -0.88
SYNE2-217ENST00000555022 IKQ13123 557 aaPredicted RBP9.58□□□□□ -0.88
SYNE2-217ENST00000555022 ZNF512BQ96KM6 892 aaPredicted RBP9.58□□□□□ -0.88
SYNE2-217ENST00000555022 FAM114A2Q9NRY5 505 aa9.58□□□□□ -0.88
SYNE2-217ENST00000555022 SLC5A4Q9NY91 659 aa9.58□□□□□ -0.88
SYNE2-217ENST00000555022 SLC12A4Q9UP95 1085 aa9.58□□□□□ -0.88
SYNE2-217ENST00000555022 ATXN2Q99700 1313 aaKnown RBP9.58□□□□□ -0.88
SYNE2-217ENST00000555022 LAMB4A4D0S4 1761 aa9.58□□□□□ -0.88
SYNE2-217ENST00000555022 C5orf60A6NFR6 353 aa9.58□□□□□ -0.88
SYNE2-217ENST00000555022 TISP43B9A030 160 aa9.58□□□□□ -0.88
SYNE2-217ENST00000555022 ZCCHC18P0CG32 403 aa9.58□□□□□ -0.88
SYNE2-217ENST00000555022 POLD1P28340 1107 aa9.58□□□□□ -0.88
SYNE2-217ENST00000555022 TRIM28Q13263 835 aaKnown RBP9.58□□□□□ -0.88
SYNE2-217ENST00000555022 GRM4Q14833 912 aa9.58□□□□□ -0.88
SYNE2-217ENST00000555022 PPP2R5BQ15173 497 aa9.58□□□□□ -0.88
SYNE2-217ENST00000555022 MUM1Q2TAK8 710 aa9.58□□□□□ -0.88
SYNE2-217ENST00000555022 USH1GQ495M9 461 aa9.58□□□□□ -0.88
SYNE2-217ENST00000555022 LACTB2Q53H82 288 aaPredicted RBP9.58□□□□□ -0.88
SYNE2-217ENST00000555022 SYCP2LQ5T4T6 812 aa9.58□□□□□ -0.88
SYNE2-217ENST00000555022 ZDHHC24Q6UX98 284 aa9.58□□□□□ -0.88
SYNE2-217ENST00000555022 APBB1IPQ7Z5R6 666 aaPredicted RBP9.58□□□□□ -0.88
SYNE2-217ENST00000555022 VPS36Q86VN1 386 aa9.58□□□□□ -0.88
SYNE2-217ENST00000555022 TRIM59Q8IWR1 403 aa9.58□□□□□ -0.88
SYNE2-217ENST00000555022 TBC1D22AQ8WUA7 517 aa9.58□□□□□ -0.88
SYNE2-217ENST00000555022 TEKT4Q8WW24 435 aa9.58□□□□□ -0.88
SYNE2-217ENST00000555022 NAF1Q96HR8 494 aaKnown RBP9.58□□□□□ -0.88
SYNE2-217ENST00000555022 MKNK1Q9BUB5 465 aa9.58□□□□□ -0.88
SYNE2-217ENST00000555022 PABPC3Q9H361 631 aaKnown RBP9.58□□□□□ -0.88
SYNE2-217ENST00000555022 ZFATQ9P243 1243 aa9.58□□□□□ -0.88
SYNE2-217ENST00000555022 ANKIB1Q9P2G1 1089 aa9.58□□□□□ -0.88
SYNE2-217ENST00000555022 SRP68Q9UHB9 627 aaKnown RBP9.58□□□□□ -0.88
SYNE2-217ENST00000555022 TTC7AQ9ULT0 858 aaPredicted RBP9.58□□□□□ -0.88
SYNE2-217ENST00000555022 PCDHA12Q9UN75 941 aa9.58□□□□□ -0.88
SYNE2-217ENST00000555022 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.58□□□□□ -0.88
SYNE2-217ENST00000555022 PFASO15067 1338 aa9.58□□□□□ -0.88
SYNE2-217ENST00000555022 MYH1P12882 1939 aa9.58□□□□□ -0.88
SYNE2-217ENST00000555022 C2orf71A6NGG8 1288 aa9.58□□□□□ -0.88
SYNE2-217ENST00000555022 GOLGA8RI6L899 631 aa9.58□□□□□ -0.88
SYNE2-217ENST00000555022 TNFAIP3P21580 790 aa9.58□□□□□ -0.88
SYNE2-217ENST00000555022 NMT1P30419 496 aaKnown RBP9.58□□□□□ -0.88
SYNE2-217ENST00000555022 GRIK3Q13003 919 aa9.58□□□□□ -0.88
SYNE2-217ENST00000555022 AUHQ13825 339 aaKnown RBP9.58□□□□□ -0.88
SYNE2-217ENST00000555022 DRAP1Q14919 205 aaPredicted RBP9.58□□□□□ -0.88
SYNE2-217ENST00000555022 SHROOM1Q2M3G4 852 aaPredicted RBP9.58□□□□□ -0.88
SYNE2-217ENST00000555022 CCDC137Q6PK04 289 aaKnown RBP9.58□□□□□ -0.88
SYNE2-217ENST00000555022 ZC3H18Q86VM9 953 aaKnown RBP9.58□□□□□ -0.88
SYNE2-217ENST00000555022 ZDHHC14Q8IZN3 488 aa9.58□□□□□ -0.88
SYNE2-217ENST00000555022 FBF1Q8TES7 1133 aa9.58□□□□□ -0.88
SYNE2-217ENST00000555022 KAT5Q92993 513 aa9.58□□□□□ -0.88
SYNE2-217ENST00000555022 TLCD1Q96CP7 247 aa9.58□□□□□ -0.88
SYNE2-217ENST00000555022 PAGR1Q9BTK6 254 aa9.58□□□□□ -0.88
SYNE2-217ENST00000555022 BRIP1Q9BX63 1249 aa9.58□□□□□ -0.88
SYNE2-217ENST00000555022 RAB17Q9H0T7 212 aa9.58□□□□□ -0.88
SYNE2-217ENST00000555022 TMEM59LQ9UK28 342 aa9.58□□□□□ -0.88
SYNE2-217ENST00000555022 COG5Q9UP83 839 aa9.58□□□□□ -0.88
SYNE2-217ENST00000555022 TJP1Q07157 1748 aa9.57□□□□□ -0.88
SYNE2-217ENST00000555022 CLDN3O15551 220 aa9.57□□□□□ -0.88
SYNE2-217ENST00000555022 AFPP02771 609 aaKnown RBP9.57□□□□□ -0.88
SYNE2-217ENST00000555022 ADCY7P51828 1080 aa9.57□□□□□ -0.88
SYNE2-217ENST00000555022 MGAT5Q09328 741 aa9.57□□□□□ -0.88
SYNE2-217ENST00000555022 MTMR2Q13614 643 aa9.57□□□□□ -0.88
SYNE2-217ENST00000555022 PRR16Q569H4 304 aa9.57□□□□□ -0.88
SYNE2-217ENST00000555022 RFWD3Q6PCD5 774 aa9.57□□□□□ -0.88
SYNE2-217ENST00000555022 CCDC65Q8IXS2 484 aa9.57□□□□□ -0.88
SYNE2-217ENST00000555022 CNBD1Q8NA66 436 aa9.57□□□□□ -0.88
SYNE2-217ENST00000555022 DNAJC19Q96DA6 116 aa9.57□□□□□ -0.88
SYNE2-217ENST00000555022 CYTH2Q99418 400 aa9.57□□□□□ -0.88
SYNE2-217ENST00000555022 MYLK2Q9H1R3 596 aa9.57□□□□□ -0.88
SYNE2-217ENST00000555022 CNOT10Q9H9A5 744 aaKnown RBP9.57□□□□□ -0.88
SYNE2-217ENST00000555022 GM2AP17900 193 aa9.57□□□□□ -0.88
SYNE2-217ENST00000555022 GNA11P29992 359 aa9.57□□□□□ -0.88
SYNE2-217ENST00000555022 HIBADHP31937 336 aaKnown RBP9.57□□□□□ -0.88
SYNE2-217ENST00000555022 LRRC36Q1X8D7 754 aa9.57□□□□□ -0.88
SYNE2-217ENST00000555022 SGSM1Q2NKQ1 1148 aa9.57□□□□□ -0.88
SYNE2-217ENST00000555022 SLC30A5Q8TAD4 765 aa9.57□□□□□ -0.88
SYNE2-217ENST00000555022 ACTRT1Q8TDG2 376 aa9.57□□□□□ -0.88
SYNE2-217ENST00000555022 JDP2Q8WYK2 163 aa9.57□□□□□ -0.88
SYNE2-217ENST00000555022 SYT15Q9BQS2 421 aa9.57□□□□□ -0.88
SYNE2-217ENST00000555022 RUSC1Q9BVN2 902 aa9.57□□□□□ -0.88
SYNE2-217ENST00000555022 CDC42EP4Q9H3Q1 356 aaKnown RBP9.57□□□□□ -0.88
SYNE2-217ENST00000555022 EBF2Q9HAK2 575 aa9.57□□□□□ -0.88
SYNE2-217ENST00000555022 RGL1Q9NZL6 768 aa9.57□□□□□ -0.88
SYNE2-217ENST00000555022 ANAPC4Q9UJX5 808 aa9.57□□□□□ -0.88
SYNE2-217ENST00000555022 DNAJC12Q9UKB3 198 aa9.57□□□□□ -0.88
SYNE2-217ENST00000555022 MINPP1Q9UNW1 487 aa9.57□□□□□ -0.88
SYNE2-217ENST00000555022 C2CD2Q9Y426 696 aa9.57□□□□□ -0.88
SYNE2-217ENST00000555022 AFF2P51816 1311 aa9.57□□□□□ -0.88
SYNE2-217ENST00000555022 GOLGA8SH3BPF8 625 aa9.57□□□□□ -0.88
SYNE2-217ENST00000555022 GOLGA8MH3BSY2 632 aa9.57□□□□□ -0.88
SYNE2-217ENST00000555022 KIAA0391O15091 583 aaKnown RBP9.57□□□□□ -0.88
SYNE2-217ENST00000555022 THAP12O43422 761 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms