RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 KMT5BQ4FZB7 885 aa19.13■□□□□ 0.65
SHOX-204ENST00000554971 VTI1AQ96AJ9 217 aa19.13■□□□□ 0.65
SHOX-204ENST00000554971 C7orf25Q9BPX7 421 aa19.13■□□□□ 0.65
SHOX-204ENST00000554971 LXNQ9BS40 222 aa19.13■□□□□ 0.65
SHOX-204ENST00000554971 MYO1AQ9UBC5 1043 aa19.13■□□□□ 0.65
SHOX-204ENST00000554971 TMEM150BA6NC51 233 aa19.12■□□□□ 0.65
SHOX-204ENST00000554971 ZBTB39O15060 712 aa19.12■□□□□ 0.65
SHOX-204ENST00000554971 KLRC4O43908 158 aa19.12■□□□□ 0.65
SHOX-204ENST00000554971 P4HBP07237 508 aaKnown RBP19.12■□□□□ 0.65
SHOX-204ENST00000554971 HOXC8P31273 242 aa19.12■□□□□ 0.65
SHOX-204ENST00000554971 CTTNQ14247 550 aaKnown RBP19.12■□□□□ 0.65
SHOX-204ENST00000554971 TRMT1LQ7Z2T5 733 aaKnown RBP19.12■□□□□ 0.65
SHOX-204ENST00000554971 CABP7Q86V35 215 aa19.12■□□□□ 0.65
SHOX-204ENST00000554971 CATSPER3Q86XQ3 398 aa19.12■□□□□ 0.65
SHOX-204ENST00000554971 HDAC6Q9UBN7 1215 aa19.12■□□□□ 0.65
SHOX-204ENST00000554971 A0A0U1RQG5 324 aaPredicted RBP19.12■□□□□ 0.65
SHOX-204ENST00000554971 ZBTB42B2RXF5 422 aa19.12■□□□□ 0.65
SHOX-204ENST00000554971 GYPCP04921 128 aa19.12■□□□□ 0.65
SHOX-204ENST00000554971 QARSP47897 775 aaKnown RBP19.12■□□□□ 0.65
SHOX-204ENST00000554971 PRKCEQ02156 737 aa19.12■□□□□ 0.65
SHOX-204ENST00000554971 C1orf53Q5VUE5 145 aa19.12■□□□□ 0.65
SHOX-204ENST00000554971 FAM160B1Q5W0V3 765 aa19.12■□□□□ 0.65
SHOX-204ENST00000554971 CYP26C1Q6V0L0 522 aa19.12■□□□□ 0.65
SHOX-204ENST00000554971 KATNAL1Q9BW62 490 aa19.12■□□□□ 0.65
SHOX-204ENST00000554971 ARVCFO00192 962 aa19.11■□□□□ 0.65
SHOX-204ENST00000554971 TADA3O75528 432 aa19.11■□□□□ 0.65
SHOX-204ENST00000554971 SMIM10L2AP0DMW4 78 aa19.11■□□□□ 0.65
SHOX-204ENST00000554971 SMIM10L2BP0DMW5 78 aa19.11■□□□□ 0.65
SHOX-204ENST00000554971 CASP14P31944 242 aa19.11■□□□□ 0.65
SHOX-204ENST00000554971 SLC26A2P50443 739 aa19.11■□□□□ 0.65
SHOX-204ENST00000554971 ERCC6LQ2NKX8 1250 aa19.11■□□□□ 0.65
SHOX-204ENST00000554971 NFRKBQ6P4R8 1299 aa19.11■□□□□ 0.65
SHOX-204ENST00000554971 FBXO38Q6PIJ6 1188 aa19.11■□□□□ 0.65
SHOX-204ENST00000554971 FAM114A1Q8IWE2 563 aa19.11■□□□□ 0.65
SHOX-204ENST00000554971 IQCDQ96DY2 449 aa19.11■□□□□ 0.65
SHOX-204ENST00000554971 FAM53CQ9NYF3 392 aa19.11■□□□□ 0.65
SHOX-204ENST00000554971 POTEB3A0JP26 581 aa19.1■□□□□ 0.65
SHOX-204ENST00000554971 ATP8B1O43520 1251 aa19.1■□□□□ 0.65
SHOX-204ENST00000554971 KIF5CO60282 957 aa19.1■□□□□ 0.65
SHOX-204ENST00000554971 RPA1P27694 616 aa19.1■□□□□ 0.65
SHOX-204ENST00000554971 PSMC5P62195 406 aa19.1■□□□□ 0.65
SHOX-204ENST00000554971 CBX1P83916 185 aa19.1■□□□□ 0.65
SHOX-204ENST00000554971 PTPN21Q16825 1174 aa19.1■□□□□ 0.65
SHOX-204ENST00000554971 POTEBQ6S5H4 581 aa19.1■□□□□ 0.65
SHOX-204ENST00000554971 ANO5Q75V66 913 aa19.1■□□□□ 0.65
SHOX-204ENST00000554971 SESTD1Q86VW0 696 aa19.1■□□□□ 0.65
SHOX-204ENST00000554971 RETREG2Q8NC44 543 aa19.1■□□□□ 0.65
SHOX-204ENST00000554971 ATP8B4Q8TF62 1192 aa19.1■□□□□ 0.65
SHOX-204ENST00000554971 SH2D3AQ9BRG2 576 aa19.1■□□□□ 0.65
SHOX-204ENST00000554971 RAB34Q9BZG1 259 aa19.1■□□□□ 0.65
SHOX-204ENST00000554971 LRRC27Q9C0I9 530 aa19.1■□□□□ 0.65
SHOX-204ENST00000554971 MAGEC2Q9UBF1 373 aaPredicted RBP19.1■□□□□ 0.65
SHOX-204ENST00000554971 GTF2IRD1Q9UHL9 959 aa19.1■□□□□ 0.65
SHOX-204ENST00000554971 MRFAP1Q9Y605 127 aa19.1■□□□□ 0.65
SHOX-204ENST00000554971 LGALS16A8MUM7 142 aa19.1■□□□□ 0.65
SHOX-204ENST00000554971 ADAM17P78536 824 aa19.1■□□□□ 0.65
SHOX-204ENST00000554971 ZNF200P98182 395 aaPredicted RBP19.1■□□□□ 0.65
SHOX-204ENST00000554971 BMS1Q14692 1282 aaKnown RBP19.1■□□□□ 0.65
SHOX-204ENST00000554971 TRIM60Q495X7 471 aa19.1■□□□□ 0.65
SHOX-204ENST00000554971 MARCH8Q5T0T0 291 aa19.1■□□□□ 0.65
SHOX-204ENST00000554971 GDF6Q6KF10 455 aaPredicted RBP19.1■□□□□ 0.65
SHOX-204ENST00000554971 POTEGQ6S5H5 508 aa19.1■□□□□ 0.65
SHOX-204ENST00000554971 TPH2Q8IWU9 490 aa19.1■□□□□ 0.65
SHOX-204ENST00000554971 LRRC15Q8TF66 581 aa19.1■□□□□ 0.65
SHOX-204ENST00000554971 LMBR1Q8WVP7 490 aa19.1■□□□□ 0.65
SHOX-204ENST00000554971 TRAPPC12Q8WVT3 735 aa19.1■□□□□ 0.65
SHOX-204ENST00000554971 ATP6V0A1Q93050 837 aa19.1■□□□□ 0.65
SHOX-204ENST00000554971 ZBTB10Q96DT7 871 aa19.1■□□□□ 0.65
SHOX-204ENST00000554971 CALML4Q96GE6 196 aa19.1■□□□□ 0.65
SHOX-204ENST00000554971 POLR3CQ9BUI4 534 aaPredicted RBP19.1■□□□□ 0.65
SHOX-204ENST00000554971 NUP58Q9BVL2 599 aa19.1■□□□□ 0.65
SHOX-204ENST00000554971 TRMT13Q9NUP7 481 aaKnown RBP19.1■□□□□ 0.65
SHOX-204ENST00000554971 SETD4Q9NVD3 440 aa19.1■□□□□ 0.65
SHOX-204ENST00000554971 STK17AQ9UEE5 414 aa19.1■□□□□ 0.65
SHOX-204ENST00000554971 GDAQ9Y2T3 454 aa19.1■□□□□ 0.65
SHOX-204ENST00000554971 SOWAHDA6NJG2 315 aa19.09■□□□□ 0.65
SHOX-204ENST00000554971 OATP04181 439 aa19.09■□□□□ 0.65
SHOX-204ENST00000554971 INSRRP14616 1297 aa19.09■□□□□ 0.65
SHOX-204ENST00000554971 DNM2P50570 870 aa19.09■□□□□ 0.65
SHOX-204ENST00000554971 RAD9BQ6WBX8 426 aa19.09■□□□□ 0.65
SHOX-204ENST00000554971 FAM126BQ8IXS8 530 aa19.09■□□□□ 0.65
SHOX-204ENST00000554971 C4orf19Q8IY42 314 aa19.09■□□□□ 0.65
SHOX-204ENST00000554971 C7orf31Q8N865 590 aa19.09■□□□□ 0.65
SHOX-204ENST00000554971 SNX29Q8TEQ0 813 aa19.09■□□□□ 0.65
SHOX-204ENST00000554971 ABHD10Q9NUJ1 306 aa19.09■□□□□ 0.65
SHOX-204ENST00000554971 PCDH10Q9P2E7 1040 aa19.09■□□□□ 0.65
SHOX-204ENST00000554971 LOXHD1Q8IVV2 1947 aa19.09■□□□□ 0.65
SHOX-204ENST00000554971 B4GALT4O60513 344 aa19.08■□□□□ 0.65
SHOX-204ENST00000554971 CAPN15O75808 1086 aa19.08■□□□□ 0.65
SHOX-204ENST00000554971 CCT6AP40227 531 aaKnown RBP19.08■□□□□ 0.65
SHOX-204ENST00000554971 FXR1P51114 621 aaKnown RBP eCLIP19.08■□□□□ 0.65
SHOX-204ENST00000554971 ARHGAP29Q52LW3 1261 aa19.08■□□□□ 0.65
SHOX-204ENST00000554971 FAM47CQ5HY64 1035 aa19.08■□□□□ 0.65
SHOX-204ENST00000554971 CNNM4Q6P4Q7 775 aa19.08■□□□□ 0.65
SHOX-204ENST00000554971 ANKRD33Q7Z3H0 272 aa19.08■□□□□ 0.65
SHOX-204ENST00000554971 IRF2BP1Q8IU81 584 aa19.08■□□□□ 0.65
SHOX-204ENST00000554971 KRT222Q8N1A0 295 aa19.08■□□□□ 0.65
SHOX-204ENST00000554971 GPR161Q8N6U8 529 aaKnown RBP19.08■□□□□ 0.65
SHOX-204ENST00000554971 NEK9Q8TD19 979 aa19.08■□□□□ 0.65
SHOX-204ENST00000554971 WDR24Q96S15 920 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms