RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 PCP11498 1178 aaKnown RBP7.38□□□□□ -1.23
SCFD1-212ENST00000554486 CASTP20810 708 aaKnown RBP7.38□□□□□ -1.23
SCFD1-212ENST00000554486 ANTXR2P58335 489 aa7.38□□□□□ -1.23
SCFD1-212ENST00000554486 EXOSC10Q01780 885 aaKnown RBP7.38□□□□□ -1.23
SCFD1-212ENST00000554486 TNK2Q07912 1038 aa7.38□□□□□ -1.23
SCFD1-212ENST00000554486 SNW1Q13573 536 aaKnown RBP7.38□□□□□ -1.23
SCFD1-212ENST00000554486 RRP1BQ14684 758 aaKnown RBP7.38□□□□□ -1.23
SCFD1-212ENST00000554486 SHROOM1Q2M3G4 852 aaPredicted RBP7.38□□□□□ -1.23
SCFD1-212ENST00000554486 RRP12Q5JTH9 1297 aaKnown RBP7.38□□□□□ -1.23
SCFD1-212ENST00000554486 AXDND1Q5T1B0 1012 aaPredicted RBP7.38□□□□□ -1.23
SCFD1-212ENST00000554486 MRM1Q6IN84 353 aaKnown RBP7.38□□□□□ -1.23
SCFD1-212ENST00000554486 ZNF746Q6NUN9 644 aaPredicted RBP7.38□□□□□ -1.23
SCFD1-212ENST00000554486 TATDN1Q6P1N9 297 aa7.38□□□□□ -1.23
SCFD1-212ENST00000554486 MFSD6Q6ZSS7 791 aa7.38□□□□□ -1.23
SCFD1-212ENST00000554486 CYB5R4Q7L1T6 521 aa7.38□□□□□ -1.23
SCFD1-212ENST00000554486 SPACA3Q8IXA5 215 aa7.38□□□□□ -1.23
SCFD1-212ENST00000554486 DTWD2Q8NBA8 298 aa7.38□□□□□ -1.23
SCFD1-212ENST00000554486 NCOA7Q8NI08 942 aa7.38□□□□□ -1.23
SCFD1-212ENST00000554486 NEK1Q96PY6 1258 aa7.38□□□□□ -1.23
SCFD1-212ENST00000554486 ASPNQ9BXN1 380 aa7.38□□□□□ -1.23
SCFD1-212ENST00000554486 UPF3BQ9BZI7 483 aaKnown RBP7.38□□□□□ -1.23
SCFD1-212ENST00000554486 RNF41Q9H4P4 317 aaPredicted RBP7.38□□□□□ -1.23
SCFD1-212ENST00000554486 PAK6Q9NQU5 681 aaPredicted RBP7.38□□□□□ -1.23
SCFD1-212ENST00000554486 SUSD2Q9UGT4 822 aa7.38□□□□□ -1.23
SCFD1-212ENST00000554486 SWAP70Q9UH65 585 aa7.38□□□□□ -1.23
SCFD1-212ENST00000554486 HERC5Q9UII4 1024 aaKnown RBP7.38□□□□□ -1.23
SCFD1-212ENST00000554486 SNX11Q9Y5W9 270 aa7.38□□□□□ -1.23
SCFD1-212ENST00000554486 GREB1LQ9C091 1923 aaPredicted RBP7.38□□□□□ -1.23
SCFD1-212ENST00000554486 TRPM7Q96QT4 1865 aa7.37□□□□□ -1.23
SCFD1-212ENST00000554486 ATAD5Q96QE3 1844 aa7.37□□□□□ -1.23
SCFD1-212ENST00000554486 TRAF5O00463 557 aa7.37□□□□□ -1.23
SCFD1-212ENST00000554486 CBFA2T2O43439 604 aa7.37□□□□□ -1.23
SCFD1-212ENST00000554486 CBX7O95931 251 aa7.37□□□□□ -1.23
SCFD1-212ENST00000554486 AKR1B1P15121 316 aa7.37□□□□□ -1.23
SCFD1-212ENST00000554486 RPS6KB1P23443 525 aa7.37□□□□□ -1.23
SCFD1-212ENST00000554486 PSMA5P28066 241 aa7.37□□□□□ -1.23
SCFD1-212ENST00000554486 JAG1P78504 1218 aa7.37□□□□□ -1.23
SCFD1-212ENST00000554486 RABEP1Q15276 862 aa7.37□□□□□ -1.23
SCFD1-212ENST00000554486 FAM47AQ5JRC9 791 aa7.37□□□□□ -1.23
SCFD1-212ENST00000554486 LARP1BQ659C4 914 aaKnown RBP7.37□□□□□ -1.23
SCFD1-212ENST00000554486 BLOC1S2Q6QNY1 142 aa7.37□□□□□ -1.23
SCFD1-212ENST00000554486 C6orf15Q6UXA7 325 aaPredicted RBP7.37□□□□□ -1.23
SCFD1-212ENST00000554486 MIGA2Q7L4E1 593 aa7.37□□□□□ -1.23
SCFD1-212ENST00000554486 RALYLQ86SE5 291 aaKnown RBP7.37□□□□□ -1.23
SCFD1-212ENST00000554486 CRACR2BQ8N4Y2 399 aaPredicted RBP7.37□□□□□ -1.23
SCFD1-212ENST00000554486 CDCA5Q96FF9 252 aa7.37□□□□□ -1.23
SCFD1-212ENST00000554486 HRASLS5Q96KN8 279 aa7.37□□□□□ -1.23
SCFD1-212ENST00000554486 DHRS1Q96LJ7 313 aa7.37□□□□□ -1.23
SCFD1-212ENST00000554486 TCEANC2Q96MN5 208 aa7.37□□□□□ -1.23
SCFD1-212ENST00000554486 TTC14Q96N46 770 aa7.37□□□□□ -1.23
SCFD1-212ENST00000554486 KRT23Q9C075 422 aa7.37□□□□□ -1.23
SCFD1-212ENST00000554486 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.37□□□□□ -1.23
SCFD1-212ENST00000554486 ST7Q9NRC1 585 aa7.37□□□□□ -1.23
SCFD1-212ENST00000554486 FAM86C1Q9NVL1 165 aa7.37□□□□□ -1.23
SCFD1-212ENST00000554486 ZSWIM5Q9P217 1185 aa7.37□□□□□ -1.23
SCFD1-212ENST00000554486 ZNF112Q9UJU3 913 aa7.37□□□□□ -1.23
SCFD1-212ENST00000554486 ST14Q9Y5Y6 855 aa7.37□□□□□ -1.23
SCFD1-212ENST00000554486 SLC12A7Q9Y666 1083 aa7.37□□□□□ -1.23
SCFD1-212ENST00000554486 PAPPA2Q9BXP8 1791 aa7.37□□□□□ -1.23
SCFD1-212ENST00000554486 PLIN4Q96Q06 1357 aa7.36□□□□□ -1.23
SCFD1-212ENST00000554486 IGKV6D-41A0A0C4DH26 115 aa7.36□□□□□ -1.23
SCFD1-212ENST00000554486 PRC1O43663 620 aa7.36□□□□□ -1.23
SCFD1-212ENST00000554486 RANBP6O60518 1105 aaKnown RBP7.36□□□□□ -1.23
SCFD1-212ENST00000554486 GJB6O95452 261 aa7.36□□□□□ -1.23
SCFD1-212ENST00000554486 TP53P04637 393 aaPredicted RBP7.36□□□□□ -1.23
SCFD1-212ENST00000554486 HMGB1P09429 215 aaKnown RBP7.36□□□□□ -1.23
SCFD1-212ENST00000554486 YY1P25490 414 aa7.36□□□□□ -1.23
SCFD1-212ENST00000554486 GUCY1A2P33402 732 aa7.36□□□□□ -1.23
SCFD1-212ENST00000554486 TFAP4Q01664 338 aa7.36□□□□□ -1.23
SCFD1-212ENST00000554486 TRDNQ13061 729 aa7.36□□□□□ -1.23
SCFD1-212ENST00000554486 DDR2Q16832 855 aa7.36□□□□□ -1.23
SCFD1-212ENST00000554486 SUPT20HL1Q3ZLR7 823 aa7.36□□□□□ -1.23
SCFD1-212ENST00000554486 CERKLQ49MI3 558 aaPredicted RBP7.36□□□□□ -1.23
SCFD1-212ENST00000554486 DCAF15Q66K64 600 aa7.36□□□□□ -1.23
SCFD1-212ENST00000554486 VHLLQ6RSH7 139 aa7.36□□□□□ -1.23
SCFD1-212ENST00000554486 RUFY3Q7L099 469 aa7.36□□□□□ -1.23
SCFD1-212ENST00000554486 CHST3Q7LGC8 479 aa7.36□□□□□ -1.23
SCFD1-212ENST00000554486 CKAP2LQ8IYA6 745 aa7.36□□□□□ -1.23
SCFD1-212ENST00000554486 ZNF444Q8N0Y2 327 aaPredicted RBP7.36□□□□□ -1.23
SCFD1-212ENST00000554486 ESR2Q92731 530 aa7.36□□□□□ -1.23
SCFD1-212ENST00000554486 COX4I2Q96KJ9 171 aa7.36□□□□□ -1.23
SCFD1-212ENST00000554486 CCDC17Q96LX7 622 aa7.36□□□□□ -1.23
SCFD1-212ENST00000554486 LRRC2Q9BYS8 371 aa7.36□□□□□ -1.23
SCFD1-212ENST00000554486 ZNF287Q9HBT7 754 aa7.36□□□□□ -1.23
SCFD1-212ENST00000554486 TOMM22Q9NS69 142 aa7.36□□□□□ -1.23
SCFD1-212ENST00000554486 FZD1Q9UP38 647 aa7.36□□□□□ -1.23
SCFD1-212ENST00000554486 MSRB2Q9Y3D2 182 aa7.36□□□□□ -1.23
SCFD1-212ENST00000554486 CYP46A1Q9Y6A2 500 aa7.36□□□□□ -1.23
SCFD1-212ENST00000554486 OTOFQ9HC10 1997 aa7.36□□□□□ -1.23
SCFD1-212ENST00000554486 MYH4Q9Y623 1939 aa7.36□□□□□ -1.23
SCFD1-212ENST00000554486 DOCK1Q14185 1865 aa7.36□□□□□ -1.23
SCFD1-212ENST00000554486 WDR19Q8NEZ3 1342 aa7.35□□□□□ -1.23
SCFD1-212ENST00000554486 SHISA3A0PJX4 238 aa7.35□□□□□ -1.23
SCFD1-212ENST00000554486 TSPY2A6NKD2 308 aa7.35□□□□□ -1.23
SCFD1-212ENST00000554486 WASH4PA8MWX3 477 aa7.35□□□□□ -1.23
SCFD1-212ENST00000554486 NMT2O60551 498 aa7.35□□□□□ -1.23
SCFD1-212ENST00000554486 USP2O75604 605 aaPredicted RBP7.35□□□□□ -1.23
SCFD1-212ENST00000554486 SRFP11831 508 aa7.35□□□□□ -1.23
SCFD1-212ENST00000554486 ITIH2P19823 946 aa7.35□□□□□ -1.23
SCFD1-212ENST00000554486 MCM5P33992 734 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms