RNA–Protein interactions for RNA: ENST00000554453.5

ABCD4-221, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-221ENST00000554453 RHPN2Q8IUC4 686 aa12.45□□□□□ -0.42
ABCD4-221ENST00000554453 EFHBQ8N7U6 833 aa12.45□□□□□ -0.42
ABCD4-221ENST00000554453 ZNF579Q8NAF0 562 aaKnown RBP12.45□□□□□ -0.42
ABCD4-221ENST00000554453 MICAL1Q8TDZ2 1067 aa12.45□□□□□ -0.42
ABCD4-221ENST00000554453 KHSRPQ92945 711 aaKnown RBP eCLIP12.45□□□□□ -0.42
ABCD4-221ENST00000554453 CEP170P1Q96L14 293 aa12.45□□□□□ -0.42
ABCD4-221ENST00000554453 ZSWIM4Q9H7M6 989 aa12.45□□□□□ -0.42
ABCD4-221ENST00000554453 RGL1Q9NZL6 768 aa12.45□□□□□ -0.42
ABCD4-221ENST00000554453 WRAP73Q9P2S5 460 aaPredicted RBP12.45□□□□□ -0.42
ABCD4-221ENST00000554453 PUF60Q9UHX1 559 aaKnown RBP12.45□□□□□ -0.42
ABCD4-221ENST00000554453 PCDHA12Q9UN75 941 aa12.45□□□□□ -0.42
ABCD4-221ENST00000554453 MYO10Q9HD67 2058 aa12.45□□□□□ -0.42
ABCD4-221ENST00000554453 KIAA1671Q9BY89 1806 aa12.44□□□□□ -0.42
ABCD4-221ENST00000554453 C19orf67A6NJJ6 358 aa12.44□□□□□ -0.42
ABCD4-221ENST00000554453 FSCN2O14926 492 aa12.44□□□□□ -0.42
ABCD4-221ENST00000554453 MBTPS2O43462 519 aa12.44□□□□□ -0.42
ABCD4-221ENST00000554453 JAK2O60674 1132 aa12.44□□□□□ -0.42
ABCD4-221ENST00000554453 LYPLA2O95372 231 aa12.44□□□□□ -0.42
ABCD4-221ENST00000554453 EYA4O95677 639 aa12.44□□□□□ -0.42
ABCD4-221ENST00000554453 SKIP12755 728 aa12.44□□□□□ -0.42
ABCD4-221ENST00000554453 COL9A1P20849 921 aa12.44□□□□□ -0.42
ABCD4-221ENST00000554453 SFPQP23246 707 aaKnown RBP eCLIP12.44□□□□□ -0.42
ABCD4-221ENST00000554453 YWHABP31946 246 aaKnown RBP12.44□□□□□ -0.42
ABCD4-221ENST00000554453 RFC5P40937 340 aa12.44□□□□□ -0.42
ABCD4-221ENST00000554453 CLLU1OSQ5K130 101 aa12.44□□□□□ -0.42
ABCD4-221ENST00000554453 PLA2G4FQ68DD2 849 aa12.44□□□□□ -0.42
ABCD4-221ENST00000554453 KCNT2Q6UVM3 1135 aa12.44□□□□□ -0.42
ABCD4-221ENST00000554453 SRGAP1Q7Z6B7 1085 aa12.44□□□□□ -0.42
ABCD4-221ENST00000554453 ADGRD2Q7Z7M1 963 aa12.44□□□□□ -0.42
ABCD4-221ENST00000554453 POTEDQ86YR6 584 aa12.44□□□□□ -0.42
ABCD4-221ENST00000554453 KSR1Q8IVT5 923 aa12.44□□□□□ -0.42
ABCD4-221ENST00000554453 THNSL1Q8IYQ7 743 aa12.44□□□□□ -0.42
ABCD4-221ENST00000554453 ABI1Q8IZP0 508 aa12.44□□□□□ -0.42
ABCD4-221ENST00000554453 PRPF31Q8WWY3 499 aaKnown RBP12.44□□□□□ -0.42
ABCD4-221ENST00000554453 SLC7A3Q8WY07 619 aa12.44□□□□□ -0.42
ABCD4-221ENST00000554453 RSPH1Q8WYR4 309 aa12.44□□□□□ -0.42
ABCD4-221ENST00000554453 MRPS27Q92552 414 aaKnown RBP12.44□□□□□ -0.42
ABCD4-221ENST00000554453 DYDC2Q96IM9 177 aa12.44□□□□□ -0.42
ABCD4-221ENST00000554453 MSLNLQ96KJ4 702 aa12.44□□□□□ -0.42
ABCD4-221ENST00000554453 HSD17B14Q9BPX1 270 aa12.44□□□□□ -0.42
ABCD4-221ENST00000554453 TLE6Q9H808 572 aa12.44□□□□□ -0.42
ABCD4-221ENST00000554453 IFT122Q9HBG6 1241 aa12.44□□□□□ -0.42
ABCD4-221ENST00000554453 TLR9Q9NR96 1032 aa12.44□□□□□ -0.42
ABCD4-221ENST00000554453 HCSTQ9UBK5 93 aa12.44□□□□□ -0.42
ABCD4-221ENST00000554453 CD207Q9UJ71 328 aa12.44□□□□□ -0.42
ABCD4-221ENST00000554453 LIMCH1Q9UPQ0 1083 aa12.44□□□□□ -0.42
ABCD4-221ENST00000554453 SPTBN5Q9NRC6 3674 aaKnown RBP12.43□□□□□ -0.42
ABCD4-221ENST00000554453 ZBTB39O15060 712 aa12.43□□□□□ -0.42
ABCD4-221ENST00000554453 LINC01565O15544 149 aa12.43□□□□□ -0.42
ABCD4-221ENST00000554453 GAS2O43903 313 aaKnown RBP12.43□□□□□ -0.42
ABCD4-221ENST00000554453 GPR37L1O60883 481 aa12.43□□□□□ -0.42
ABCD4-221ENST00000554453 CENPBP07199 599 aaPredicted RBP12.43□□□□□ -0.42
ABCD4-221ENST00000554453 XRCC6P12956 609 aaKnown RBP eCLIP12.43□□□□□ -0.42
ABCD4-221ENST00000554453 ATF7P17544 494 aaPredicted RBP12.43□□□□□ -0.42
ABCD4-221ENST00000554453 PHKA2P46019 1235 aa12.43□□□□□ -0.42
ABCD4-221ENST00000554453 NRIP1P48552 1158 aa12.43□□□□□ -0.42
ABCD4-221ENST00000554453 KRT17Q04695 432 aa12.43□□□□□ -0.42
ABCD4-221ENST00000554453 ST3GAL1Q11201 340 aa12.43□□□□□ -0.42
ABCD4-221ENST00000554453 TRIM29Q14134 588 aa12.43□□□□□ -0.42
ABCD4-221ENST00000554453 CTTNQ14247 550 aaKnown RBP12.43□□□□□ -0.42
ABCD4-221ENST00000554453 SMAD2Q15796 467 aaKnown RBP12.43□□□□□ -0.42
ABCD4-221ENST00000554453 XKR9Q5GH70 373 aa12.43□□□□□ -0.42
ABCD4-221ENST00000554453 NCAPH2Q6IBW4 605 aa12.43□□□□□ -0.42
ABCD4-221ENST00000554453 RBM23Q86U06 439 aaKnown RBP12.43□□□□□ -0.42
ABCD4-221ENST00000554453 TPH2Q8IWU9 490 aa12.43□□□□□ -0.42
ABCD4-221ENST00000554453 ADHFE1Q8IWW8 467 aa12.43□□□□□ -0.42
ABCD4-221ENST00000554453 DIS3L2Q8IYB7 885 aaKnown RBP12.43□□□□□ -0.42
ABCD4-221ENST00000554453 ZNF558Q96NG5 402 aa12.43□□□□□ -0.42
ABCD4-221ENST00000554453 MTMR9Q96QG7 549 aa12.43□□□□□ -0.42
ABCD4-221ENST00000554453 CDCA3Q99618 268 aaPredicted RBP12.43□□□□□ -0.42
ABCD4-221ENST00000554453 EIF2AK1Q9BQI3 630 aaKnown RBP12.43□□□□□ -0.42
ABCD4-221ENST00000554453 LLPHQ9BRT6 129 aaKnown RBP12.43□□□□□ -0.42
ABCD4-221ENST00000554453 LXNQ9BS40 222 aa12.43□□□□□ -0.42
ABCD4-221ENST00000554453 ANKEF1Q9NU02 776 aa12.43□□□□□ -0.42
ABCD4-221ENST00000554453 SPG21Q9NZD8 308 aa12.43□□□□□ -0.42
ABCD4-221ENST00000554453 CLEC1BQ9P126 229 aa12.43□□□□□ -0.42
ABCD4-221ENST00000554453 COL4A3BPQ9Y5P4 624 aa12.43□□□□□ -0.42
ABCD4-221ENST00000554453 PLXNA4Q9HCM2 1894 aa12.42□□□□□ -0.42
ABCD4-221ENST00000554453 TBX10O75333 385 aa12.42□□□□□ -0.42
ABCD4-221ENST00000554453 CSPG5O95196 566 aa12.42□□□□□ -0.42
ABCD4-221ENST00000554453 SRGAP2CP0DJJ0 459 aa12.42□□□□□ -0.42
ABCD4-221ENST00000554453 SSTR3P32745 418 aaPredicted RBP12.42□□□□□ -0.42
ABCD4-221ENST00000554453 PPM1AP35813 382 aa12.42□□□□□ -0.42
ABCD4-221ENST00000554453 POLGP54098 1239 aaPredicted RBP12.42□□□□□ -0.42
ABCD4-221ENST00000554453 ZP2Q05996 745 aa12.42□□□□□ -0.42
ABCD4-221ENST00000554453 POU5F1BQ06416 359 aa12.42□□□□□ -0.42
ABCD4-221ENST00000554453 LAMTOR4Q0VGL1 99 aa12.42□□□□□ -0.42
ABCD4-221ENST00000554453 COASYQ13057 564 aa12.42□□□□□ -0.42
ABCD4-221ENST00000554453 SMAD4Q13485 552 aaKnown RBP12.42□□□□□ -0.42
ABCD4-221ENST00000554453 CALCRLQ16602 461 aa12.42□□□□□ -0.42
ABCD4-221ENST00000554453 TWF2Q6IBS0 349 aaKnown RBP12.42□□□□□ -0.42
ABCD4-221ENST00000554453 TMEM184AQ6ZMB5 413 aa12.42□□□□□ -0.42
ABCD4-221ENST00000554453 CATSPER4Q7RTX7 472 aa12.42□□□□□ -0.42
ABCD4-221ENST00000554453 MRPL10Q7Z7H8 261 aaKnown RBP12.42□□□□□ -0.42
ABCD4-221ENST00000554453 LRRC43Q8N309 656 aa12.42□□□□□ -0.42
ABCD4-221ENST00000554453 RNF169Q8NCN4 708 aa12.42□□□□□ -0.42
ABCD4-221ENST00000554453 HELQQ8TDG4 1101 aa12.42□□□□□ -0.42
ABCD4-221ENST00000554453 TCP11Q8WWU5 503 aa12.42□□□□□ -0.42
ABCD4-221ENST00000554453 PSPC1Q8WXF1 523 aaKnown RBP12.42□□□□□ -0.42
ABCD4-221ENST00000554453 TMEM143Q96AN5 459 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms