RNA–Protein interactions for RNA: ENST00000554439.5

PRPF39-207, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,982 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-207ENST00000554439 WASF1Q92558 559 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 MS4A14Q96JA4 679 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 FERD3LQ96RJ6 166 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 GAS2L1Q99501 681 aaPredicted RBP2.83□□□□□ -1.96
PRPF39-207ENST00000554439 POP1Q99575 1024 aaKnown RBP2.83□□□□□ -1.96
PRPF39-207ENST00000554439 PHF20Q9BVI0 1012 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 NHEJ1Q9H9Q4 299 aaPredicted RBP2.83□□□□□ -1.96
PRPF39-207ENST00000554439 CD248Q9HCU0 757 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 TMEM39AQ9NV64 488 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 LRWD1Q9UFC0 647 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 RWDD2AQ9UIY3 292 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 GDF2Q9UK05 429 aaPredicted RBP2.83□□□□□ -1.96
PRPF39-207ENST00000554439 CEP131Q9UPN4 1083 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 LUC7L2Q9Y383 392 aaKnown RBP2.83□□□□□ -1.96
PRPF39-207ENST00000554439 CAPN7Q9Y6W3 813 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 CAMTA1Q9Y6Y1 1673 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 LRP6O75581 1613 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 TNKSO95271 1327 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 WDR17Q8IZU2 1322 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 TARSL2A2RTX5 802 aaKnown RBP2.83□□□□□ -1.96
PRPF39-207ENST00000554439 WTIPA6NIX2 430 aaPredicted RBP2.83□□□□□ -1.96
PRPF39-207ENST00000554439 KHNYNO15037 678 aaKnown RBP2.83□□□□□ -1.96
PRPF39-207ENST00000554439 EPHB6O15197 1021 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 NMT2O60551 498 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 ATE1O95260 518 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 MOCS3O95396 460 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 B3GALT4O96024 378 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 PCCAP05165 728 aaPredicted RBP2.83□□□□□ -1.96
PRPF39-207ENST00000554439 CSF1RP07333 972 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 FAM153BP0C7A2 387 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 KRT2P35908 639 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 SEC24CP53992 1094 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 TUBB4BP68371 445 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 GUCY1A3Q02108 690 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 ZNF252P-AS1Q0IIN9 211 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 SPEM2Q0P670 501 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 PPFIA1Q13136 1202 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 LBRQ14739 615 aaKnown RBP2.83□□□□□ -1.96
PRPF39-207ENST00000554439 UBE3CQ15386 1083 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 ZNF423Q2M1K9 1284 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 FAM153CQ494X1 144 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 TTC38Q5R3I4 469 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 LCE5AQ5TCM9 118 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 LINC00114Q6XXX2 140 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 TOM1L2Q6ZVM7 507 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 ADGRA1Q86SQ6 560 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 PDZD3Q86UT5 571 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 ANKLE2Q86XL3 938 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 TICAM2Q86XR7 235 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 ZNF507Q8TCN5 953 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 ASAP3Q8TDY4 903 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 THAP3Q8WTV1 239 aaPredicted RBP2.83□□□□□ -1.96
PRPF39-207ENST00000554439 SECISBP2LQ93073 1101 aaKnown RBP2.83□□□□□ -1.96
PRPF39-207ENST00000554439 HPS3Q969F9 1004 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 SH3GL2Q99962 352 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 JPH2Q9BR39 696 aaPredicted RBP2.83□□□□□ -1.96
PRPF39-207ENST00000554439 ISCA1Q9BUE6 129 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 FAM107BQ9H098 131 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 CXorf56Q9H5V9 222 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 HAUS4Q9H6D7 363 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 CACNA2D2Q9NY47 1150 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 FAM153AQ9UHL3 310 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 GPN3Q9UHW5 284 aaPredicted RBP2.83□□□□□ -1.96
PRPF39-207ENST00000554439 FAM184BQ9ULE4 1060 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 CAPN11Q9UMQ6 739 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 PCDHB14Q9Y5E9 798 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 PCDHGC4Q9Y5F7 938 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 PTCH2Q9Y6C5 1203 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 KIF1AQ12756 1690 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 KAT6BQ8WYB5 2073 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 ATRNO75882 1429 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 A0A1W2PQH9 124 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 ERICH2A1L162 156 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 LGALS16A8MUM7 142 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 J3QW42 95 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 NDUFAB1O14561 156 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 KRT86O43790 486 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 TUBBP07437 444 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 TRIM21P19474 475 aaKnown RBP2.82□□□□□ -1.96
PRPF39-207ENST00000554439 NME2P22392 152 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 CDK8P49336 464 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 FNTAP49354 379 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 CARSP49589 748 aaKnown RBP2.82□□□□□ -1.96
PRPF39-207ENST00000554439 GUCY2FP51841 1108 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 NRLP54845 237 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 GSCP56915 257 aaPredicted RBP2.82□□□□□ -1.96
PRPF39-207ENST00000554439 RNASE9P60153 205 aaKnown RBP2.82□□□□□ -1.96
PRPF39-207ENST00000554439 ATP2C1P98194 919 aaPredicted RBP2.82□□□□□ -1.96
PRPF39-207ENST00000554439 IFRD2Q12894 506 aaPredicted RBP2.82□□□□□ -1.96
PRPF39-207ENST00000554439 FXNQ16595 210 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 CCDC96Q2M329 555 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 SLC4A8Q2Y0W8 1093 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 ZNF658Q5TYW1 1059 aaPredicted RBP2.82□□□□□ -1.96
PRPF39-207ENST00000554439 HAUS3Q68CZ6 603 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 C6orf15Q6UXA7 325 aaPredicted RBP2.82□□□□□ -1.96
PRPF39-207ENST00000554439 VN1R5Q7Z5H4 357 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 CCDC91Q7Z6B0 441 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 DHX37Q8IY37 1157 aaKnown RBP2.82□□□□□ -1.96
PRPF39-207ENST00000554439 ENAHQ8N8S7 591 aaPredicted RBP2.82□□□□□ -1.96
PRPF39-207ENST00000554439 SPATA5Q8NB90 893 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms