RNA–Protein interactions for RNA: ENST00000554018.1

TRAPPC6B-204, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 4

Gene TRAPPC6B, Length 541 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-204ENST00000554018 CYP4A11Q02928 519 aa13.31□□□□□ -0.28
TRAPPC6B-204ENST00000554018 ADAM15Q13444 863 aa13.31□□□□□ -0.28
TRAPPC6B-204ENST00000554018 TRIM29Q14134 588 aa13.31□□□□□ -0.28
TRAPPC6B-204ENST00000554018 CTTNQ14247 550 aaKnown RBP13.31□□□□□ -0.28
TRAPPC6B-204ENST00000554018 CLLU1OSQ5K130 101 aa13.31□□□□□ -0.28
TRAPPC6B-204ENST00000554018 RBM23Q86U06 439 aaKnown RBP13.31□□□□□ -0.28
TRAPPC6B-204ENST00000554018 ZNF598Q86UK7 904 aaKnown RBP13.31□□□□□ -0.28
TRAPPC6B-204ENST00000554018 DIS3L2Q8IYB7 885 aaKnown RBP13.31□□□□□ -0.28
TRAPPC6B-204ENST00000554018 SLFN12Q8IYM2 578 aa13.31□□□□□ -0.28
TRAPPC6B-204ENST00000554018 THNSL1Q8IYQ7 743 aa13.31□□□□□ -0.28
TRAPPC6B-204ENST00000554018 TMEM143Q96AN5 459 aa13.31□□□□□ -0.28
TRAPPC6B-204ENST00000554018 DYDC2Q96IM9 177 aa13.31□□□□□ -0.28
TRAPPC6B-204ENST00000554018 NLRP4Q96MN2 994 aa13.31□□□□□ -0.28
TRAPPC6B-204ENST00000554018 JPH2Q9BR39 696 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC6B-204ENST00000554018 BMP2KQ9NSY1 1161 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC6B-204ENST00000554018 LIMCH1Q9UPQ0 1083 aa13.31□□□□□ -0.28
TRAPPC6B-204ENST00000554018 A0A0U1RQF3 1178 aa13.3□□□□□ -0.28
TRAPPC6B-204ENST00000554018 HOXA2O43364 376 aa13.3□□□□□ -0.28
TRAPPC6B-204ENST00000554018 TBX10O75333 385 aa13.3□□□□□ -0.28
TRAPPC6B-204ENST00000554018 SLITRK3O94933 977 aa13.3□□□□□ -0.28
TRAPPC6B-204ENST00000554018 EOMESO95936 686 aa13.3□□□□□ -0.28
TRAPPC6B-204ENST00000554018 ATF7P17544 494 aaPredicted RBP13.3□□□□□ -0.28
TRAPPC6B-204ENST00000554018 LAG3P18627 525 aa13.3□□□□□ -0.28
TRAPPC6B-204ENST00000554018 SFPQP23246 707 aaKnown RBP eCLIP13.3□□□□□ -0.28
TRAPPC6B-204ENST00000554018 YWHABP31946 246 aaKnown RBP13.3□□□□□ -0.28
TRAPPC6B-204ENST00000554018 PBX3P40426 434 aa13.3□□□□□ -0.28
TRAPPC6B-204ENST00000554018 NRIP1P48552 1158 aa13.3□□□□□ -0.28
TRAPPC6B-204ENST00000554018 POLGP54098 1239 aaPredicted RBP13.3□□□□□ -0.28
TRAPPC6B-204ENST00000554018 ERVFC1P60507 584 aa13.3□□□□□ -0.28
TRAPPC6B-204ENST00000554018 GUCY1B3Q02153 619 aa13.3□□□□□ -0.28
TRAPPC6B-204ENST00000554018 CALCRLQ16602 461 aa13.3□□□□□ -0.28
TRAPPC6B-204ENST00000554018 ZNF410Q86VK4 478 aa13.3□□□□□ -0.28
TRAPPC6B-204ENST00000554018 C4orf19Q8IY42 314 aa13.3□□□□□ -0.28
TRAPPC6B-204ENST00000554018 ABI1Q8IZP0 508 aa13.3□□□□□ -0.28
TRAPPC6B-204ENST00000554018 GJD3Q8N144 294 aa13.3□□□□□ -0.28
TRAPPC6B-204ENST00000554018 HELQQ8TDG4 1101 aa13.3□□□□□ -0.28
TRAPPC6B-204ENST00000554018 MICAL1Q8TDZ2 1067 aa13.3□□□□□ -0.28
TRAPPC6B-204ENST00000554018 PRPF31Q8WWY3 499 aaKnown RBP13.3□□□□□ -0.28
TRAPPC6B-204ENST00000554018 SLC7A3Q8WY07 619 aa13.3□□□□□ -0.28
TRAPPC6B-204ENST00000554018 PPP2R3CQ969Q6 453 aa13.3□□□□□ -0.28
TRAPPC6B-204ENST00000554018 DHX33Q9H6R0 707 aaKnown RBP13.3□□□□□ -0.28
TRAPPC6B-204ENST00000554018 ZSWIM4Q9H7M6 989 aa13.3□□□□□ -0.28
TRAPPC6B-204ENST00000554018 CHST12Q9NRB3 414 aa13.3□□□□□ -0.28
TRAPPC6B-204ENST00000554018 DACT1Q9NYF0 836 aa13.3□□□□□ -0.28
TRAPPC6B-204ENST00000554018 COL4A3BPQ9Y5P4 624 aa13.3□□□□□ -0.28
TRAPPC6B-204ENST00000554018 WDFY4Q6ZS81 3184 aa13.29□□□□□ -0.28
TRAPPC6B-204ENST00000554018 SRGAP2CP0DJJ0 459 aa13.29□□□□□ -0.28
TRAPPC6B-204ENST00000554018 SSTR3P32745 418 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC6B-204ENST00000554018 RFC5P40937 340 aa13.29□□□□□ -0.28
TRAPPC6B-204ENST00000554018 PHKA2P46019 1235 aa13.29□□□□□ -0.28
TRAPPC6B-204ENST00000554018 UBE3AQ05086 875 aa13.29□□□□□ -0.28
TRAPPC6B-204ENST00000554018 LAMTOR4Q0VGL1 99 aa13.29□□□□□ -0.28
TRAPPC6B-204ENST00000554018 CSPP1Q1MSJ5 1256 aa13.29□□□□□ -0.28
TRAPPC6B-204ENST00000554018 LONRF3Q496Y0 759 aa13.29□□□□□ -0.28
TRAPPC6B-204ENST00000554018 XKR9Q5GH70 373 aa13.29□□□□□ -0.28
TRAPPC6B-204ENST00000554018 TWF2Q6IBS0 349 aaKnown RBP13.29□□□□□ -0.28
TRAPPC6B-204ENST00000554018 KCNT2Q6UVM3 1135 aa13.29□□□□□ -0.28
TRAPPC6B-204ENST00000554018 OTUD6AQ7L8S5 288 aa13.29□□□□□ -0.28
TRAPPC6B-204ENST00000554018 CATSPER4Q7RTX7 472 aa13.29□□□□□ -0.28
TRAPPC6B-204ENST00000554018 CCDC83Q8IWF9 413 aa13.29□□□□□ -0.28
TRAPPC6B-204ENST00000554018 TPH2Q8IWU9 490 aa13.29□□□□□ -0.28
TRAPPC6B-204ENST00000554018 LRRC43Q8N309 656 aa13.29□□□□□ -0.28
TRAPPC6B-204ENST00000554018 EFHBQ8N7U6 833 aa13.29□□□□□ -0.28
TRAPPC6B-204ENST00000554018 LPPQ93052 612 aa13.29□□□□□ -0.28
TRAPPC6B-204ENST00000554018 EIF2AK1Q9BQI3 630 aaKnown RBP13.29□□□□□ -0.28
TRAPPC6B-204ENST00000554018 INO80BQ9C086 356 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC6B-204ENST00000554018 TLE6Q9H808 572 aa13.29□□□□□ -0.28
TRAPPC6B-204ENST00000554018 IFT122Q9HBG6 1241 aa13.29□□□□□ -0.28
TRAPPC6B-204ENST00000554018 TLR9Q9NR96 1032 aa13.29□□□□□ -0.28
TRAPPC6B-204ENST00000554018 RAPGEFL1Q9UHV5 662 aa13.29□□□□□ -0.28
TRAPPC6B-204ENST00000554018 PCDHA12Q9UN75 941 aa13.29□□□□□ -0.28
TRAPPC6B-204ENST00000554018 PIN4Q9Y237 131 aaKnown RBP13.29□□□□□ -0.28
TRAPPC6B-204ENST00000554018 FAM50BQ9Y247 325 aa13.29□□□□□ -0.28
TRAPPC6B-204ENST00000554018 PPME1Q9Y570 386 aa13.29□□□□□ -0.28
TRAPPC6B-204ENST00000554018 PER2O15055 1255 aa13.28□□□□□ -0.28
TRAPPC6B-204ENST00000554018 NEMFO60524 1076 aa13.28□□□□□ -0.28
TRAPPC6B-204ENST00000554018 ATP2B1P20020 1258 aa13.28□□□□□ -0.28
TRAPPC6B-204ENST00000554018 COL9A1P20849 921 aa13.28□□□□□ -0.28
TRAPPC6B-204ENST00000554018 TXKP42681 527 aa13.28□□□□□ -0.28
TRAPPC6B-204ENST00000554018 NDUFV1P49821 464 aa13.28□□□□□ -0.28
TRAPPC6B-204ENST00000554018 EMC2Q15006 297 aa13.28□□□□□ -0.28
TRAPPC6B-204ENST00000554018 EXOC8Q8IYI6 725 aa13.28□□□□□ -0.28
TRAPPC6B-204ENST00000554018 PSPC1Q8WXF1 523 aaKnown RBP13.28□□□□□ -0.28
TRAPPC6B-204ENST00000554018 ZNF558Q96NG5 402 aa13.28□□□□□ -0.28
TRAPPC6B-204ENST00000554018 MTMR9Q96QG7 549 aa13.28□□□□□ -0.28
TRAPPC6B-204ENST00000554018 KIF2CQ99661 725 aa13.28□□□□□ -0.28
TRAPPC6B-204ENST00000554018 HSD17B14Q9BPX1 270 aa13.28□□□□□ -0.28
TRAPPC6B-204ENST00000554018 C1QTNF1Q9BXJ1 281 aa13.28□□□□□ -0.28
TRAPPC6B-204ENST00000554018 TTC12Q9H892 705 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC6B-204ENST00000554018 MINDY3Q9H8M7 445 aa13.28□□□□□ -0.28
TRAPPC6B-204ENST00000554018 CLEC1BQ9P126 229 aa13.28□□□□□ -0.28
TRAPPC6B-204ENST00000554018 CD207Q9UJ71 328 aa13.28□□□□□ -0.28
TRAPPC6B-204ENST00000554018 MUC6Q6W4X9 2439 aa13.27□□□□□ -0.29
TRAPPC6B-204ENST00000554018 A0A087WWV3 80 aa13.27□□□□□ -0.29
TRAPPC6B-204ENST00000554018 MEIS3P2A8K0S8 358 aa13.27□□□□□ -0.29
TRAPPC6B-204ENST00000554018 FSCN2O14926 492 aa13.27□□□□□ -0.29
TRAPPC6B-204ENST00000554018 MBTPS2O43462 519 aa13.27□□□□□ -0.29
TRAPPC6B-204ENST00000554018 GLP2RO95838 553 aa13.27□□□□□ -0.29
TRAPPC6B-204ENST00000554018 RBM10P98175 930 aaKnown RBP13.27□□□□□ -0.29
TRAPPC6B-204ENST00000554018 PLCB3Q01970 1234 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms