RNA–Protein interactions for RNA: ENST00000553744.1

TMEM253-202, Transcript of transmembrane protein 253, humanhuman

TSL 3

Gene TMEM253, Length 195 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-202ENST00000553744 FOXD4L6Q3SYB3 417 aaPredicted RBP13.19□□□□□ -0.3
TMEM253-202ENST00000553744 ZNF697Q5TEC3 545 aa13.19□□□□□ -0.3
TMEM253-202ENST00000553744 ATL3Q6DD88 541 aa13.19□□□□□ -0.3
TMEM253-202ENST00000553744 FOXD4L3Q6VB84 417 aaPredicted RBP13.19□□□□□ -0.3
TMEM253-202ENST00000553744 MAEAQ7L5Y9 396 aa13.19□□□□□ -0.3
TMEM253-202ENST00000553744 RTN4RL1Q86UN2 441 aaPredicted RBP13.19□□□□□ -0.3
TMEM253-202ENST00000553744 KRI1Q8N9T8 703 aaKnown RBP13.19□□□□□ -0.3
TMEM253-202ENST00000553744 RNF149Q8NC42 400 aa13.19□□□□□ -0.3
TMEM253-202ENST00000553744 TOP1MTQ969P6 601 aa13.19□□□□□ -0.3
TMEM253-202ENST00000553744 CALML4Q96GE6 196 aa13.19□□□□□ -0.3
TMEM253-202ENST00000553744 INO80BQ9C086 356 aaPredicted RBP13.19□□□□□ -0.3
TMEM253-202ENST00000553744 NKX2-4Q9H2Z4 354 aa13.19□□□□□ -0.3
TMEM253-202ENST00000553744 GPRC5CQ9NQ84 441 aa13.19□□□□□ -0.3
TMEM253-202ENST00000553744 TFIP11Q9UBB9 837 aaKnown RBP13.19□□□□□ -0.3
TMEM253-202ENST00000553744 ZDHHC9Q9Y397 364 aa13.19□□□□□ -0.3
TMEM253-202ENST00000553744 GBF1Q92538 1859 aa13.19□□□□□ -0.3
TMEM253-202ENST00000553744 DENND3A2RUS2 1198 aa13.18□□□□□ -0.3
TMEM253-202ENST00000553744 SPTLC2O15270 562 aa13.18□□□□□ -0.3
TMEM253-202ENST00000553744 PPP6R2O75170 966 aa13.18□□□□□ -0.3
TMEM253-202ENST00000553744 MYOGP15173 224 aa13.18□□□□□ -0.3
TMEM253-202ENST00000553744 FGFR4P22455 802 aa13.18□□□□□ -0.3
TMEM253-202ENST00000553744 GLRA2P23416 452 aa13.18□□□□□ -0.3
TMEM253-202ENST00000553744 PHKA2P46019 1235 aa13.18□□□□□ -0.3
TMEM253-202ENST00000553744 POU5F1BQ06416 359 aa13.18□□□□□ -0.3
TMEM253-202ENST00000553744 CAPSQ13938 189 aa13.18□□□□□ -0.3
TMEM253-202ENST00000553744 TFDP1Q14186 410 aa13.18□□□□□ -0.3
TMEM253-202ENST00000553744 DSC3Q14574 896 aa13.18□□□□□ -0.3
TMEM253-202ENST00000553744 KARSQ15046 597 aaKnown RBP13.18□□□□□ -0.3
TMEM253-202ENST00000553744 FAM102BQ5T8I3 360 aa13.18□□□□□ -0.3
TMEM253-202ENST00000553744 FAM117BQ6P1L5 589 aa13.18□□□□□ -0.3
TMEM253-202ENST00000553744 SRGAP1Q7Z6B7 1085 aa13.18□□□□□ -0.3
TMEM253-202ENST00000553744 SYMPKQ92797 1274 aaKnown RBP13.18□□□□□ -0.3
TMEM253-202ENST00000553744 CLIC6Q96NY7 704 aa13.18□□□□□ -0.3
TMEM253-202ENST00000553744 PLIN2Q99541 437 aa13.18□□□□□ -0.3
TMEM253-202ENST00000553744 ADAM2Q99965 735 aa13.18□□□□□ -0.3
TMEM253-202ENST00000553744 ZBED2Q9BTP6 218 aa13.18□□□□□ -0.3
TMEM253-202ENST00000553744 CCSER1Q9C0I3 900 aa13.18□□□□□ -0.3
TMEM253-202ENST00000553744 COL4A6Q14031 1691 aa13.18□□□□□ -0.3
TMEM253-202ENST00000553744 UPP2O95045 317 aa13.17□□□□□ -0.3
TMEM253-202ENST00000553744 CA3P07451 260 aa13.17□□□□□ -0.3
TMEM253-202ENST00000553744 PLCG1P19174 1290 aa13.17□□□□□ -0.3
TMEM253-202ENST00000553744 PTENP60484 403 aa13.17□□□□□ -0.3
TMEM253-202ENST00000553744 HTRA4P83105 476 aaPredicted RBP13.17□□□□□ -0.3
TMEM253-202ENST00000553744 DNM1Q05193 864 aaKnown RBP13.17□□□□□ -0.3
TMEM253-202ENST00000553744 SPECC1Q5M775 1068 aa13.17□□□□□ -0.3
TMEM253-202ENST00000553744 PPP2R2DQ66LE6 453 aa13.17□□□□□ -0.3
TMEM253-202ENST00000553744 USP49Q70CQ1 688 aa13.17□□□□□ -0.3
TMEM253-202ENST00000553744 IFNLR1Q8IU57 520 aaPredicted RBP13.17□□□□□ -0.3
TMEM253-202ENST00000553744 NPAS4Q8IUM7 802 aa13.17□□□□□ -0.3
TMEM253-202ENST00000553744 SYT2Q8N9I0 419 aaPredicted RBP13.17□□□□□ -0.3
TMEM253-202ENST00000553744 RASSF8Q8NHQ8 419 aa13.17□□□□□ -0.3
TMEM253-202ENST00000553744 LRRC15Q8TF66 581 aa13.17□□□□□ -0.3
TMEM253-202ENST00000553744 EPSTI1Q96J88 318 aa13.17□□□□□ -0.3
TMEM253-202ENST00000553744 RAD9AQ99638 391 aa13.17□□□□□ -0.3
TMEM253-202ENST00000553744 RUSC1Q9BVN2 902 aa13.17□□□□□ -0.3
TMEM253-202ENST00000553744 NFKBIZQ9BYH8 718 aa13.17□□□□□ -0.3
TMEM253-202ENST00000553744 TTYH1Q9H313 450 aaPredicted RBP13.17□□□□□ -0.3
TMEM253-202ENST00000553744 MINDY3Q9H8M7 445 aa13.17□□□□□ -0.3
TMEM253-202ENST00000553744 RGS18Q9NS28 235 aa13.17□□□□□ -0.3
TMEM253-202ENST00000553744 C1orf112Q9NSG2 853 aa13.17□□□□□ -0.3
TMEM253-202ENST00000553744 DAXXQ9UER7 740 aaPredicted RBP13.17□□□□□ -0.3
TMEM253-202ENST00000553744 LCHNA4D1U4 455 aa13.16□□□□□ -0.3
TMEM253-202ENST00000553744 C9IYK1 514 aa13.16□□□□□ -0.3
TMEM253-202ENST00000553744 SSBP05455 408 aaKnown RBP eCLIP13.16□□□□□ -0.3
TMEM253-202ENST00000553744 PLA2G4BP0C869 781 aa13.16□□□□□ -0.3
TMEM253-202ENST00000553744 ZSCAN20P17040 1043 aaPredicted RBP13.16□□□□□ -0.3
TMEM253-202ENST00000553744 TXLNAP40222 546 aa13.16□□□□□ -0.3
TMEM253-202ENST00000553744 SARSP49591 514 aaKnown RBP13.16□□□□□ -0.3
TMEM253-202ENST00000553744 SLC12A3P55017 1021 aa13.16□□□□□ -0.3
TMEM253-202ENST00000553744 PCBP1Q15365 356 aaKnown RBP eCLIP13.16□□□□□ -0.3
TMEM253-202ENST00000553744 CDCA2Q69YH5 1023 aaPredicted RBP13.16□□□□□ -0.3
TMEM253-202ENST00000553744 RINT1Q6NUQ1 792 aa13.16□□□□□ -0.3
TMEM253-202ENST00000553744 C1orf186Q6ZWK4 172 aa13.16□□□□□ -0.3
TMEM253-202ENST00000553744 SLC24A5Q71RS6 500 aa13.16□□□□□ -0.3
TMEM253-202ENST00000553744 CATSPER4Q7RTX7 472 aa13.16□□□□□ -0.3
TMEM253-202ENST00000553744 CRIPAKQ8N1N5 446 aa13.16□□□□□ -0.3
TMEM253-202ENST00000553744 KCNG4Q8TDN1 519 aa13.16□□□□□ -0.3
TMEM253-202ENST00000553744 BSNDQ8WZ55 320 aa13.16□□□□□ -0.3
TMEM253-202ENST00000553744 KIFAP3Q92845 792 aa13.16□□□□□ -0.3
TMEM253-202ENST00000553744 YME1L1Q96TA2 773 aa13.16□□□□□ -0.3
TMEM253-202ENST00000553744 SEMA6BQ9H3T3 888 aa13.16□□□□□ -0.3
TMEM253-202ENST00000553744 ZNF576Q9H609 170 aa13.16□□□□□ -0.3
TMEM253-202ENST00000553744 SLC28A3Q9HAS3 691 aa13.16□□□□□ -0.3
TMEM253-202ENST00000553744 CHST12Q9NRB3 414 aa13.16□□□□□ -0.3
TMEM253-202ENST00000553744 BLOC1S4Q9NUP1 217 aa13.16□□□□□ -0.3
TMEM253-202ENST00000553744 AGPAT5Q9NUQ2 364 aa13.16□□□□□ -0.3
TMEM253-202ENST00000553744 CFAP45Q9UL16 551 aa13.16□□□□□ -0.3
TMEM253-202ENST00000553744 INSL6Q9Y581 213 aa13.16□□□□□ -0.3
TMEM253-202ENST00000553744 CDH23Q9H251 3354 aa13.15□□□□□ -0.3
TMEM253-202ENST00000553744 LRRIQ4A6NIV6 560 aa13.15□□□□□ -0.3
TMEM253-202ENST00000553744 ARHGEF15O94989 841 aa13.15□□□□□ -0.3
TMEM253-202ENST00000553744 STAG3L1P0CL83 205 aa13.15□□□□□ -0.3
TMEM253-202ENST00000553744 GUCY2CP25092 1073 aa13.15□□□□□ -0.3
TMEM253-202ENST00000553744 DDIT3P35638 169 aa13.15□□□□□ -0.3
TMEM253-202ENST00000553744 NAMPTP43490 491 aa13.15□□□□□ -0.3
TMEM253-202ENST00000553744 MBTD1Q05BQ5 628 aa13.15□□□□□ -0.3
TMEM253-202ENST00000553744 PPP2R5AQ15172 486 aa13.15□□□□□ -0.3
TMEM253-202ENST00000553744 DAW1Q8N136 415 aa13.15□□□□□ -0.3
TMEM253-202ENST00000553744 SP7Q8TDD2 431 aaPredicted RBP13.15□□□□□ -0.3
TMEM253-202ENST00000553744 RAD54LQ92698 747 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms