RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 KRTAP1-3Q8IUG1 177 aa7.53□□□□□ -1.2
ATXN3-223ENST00000553686 ANKRD18AQ8IVF6 992 aa7.53□□□□□ -1.2
ATXN3-223ENST00000553686 MICAL1Q8TDZ2 1067 aa7.53□□□□□ -1.2
ATXN3-223ENST00000553686 ASB2Q96Q27 587 aa7.53□□□□□ -1.2
ATXN3-223ENST00000553686 THUMPD2Q9BTF0 503 aaKnown RBP7.53□□□□□ -1.2
ATXN3-223ENST00000553686 NUDCQ9Y266 331 aa7.53□□□□□ -1.2
ATXN3-223ENST00000553686 POLR2AP24928 1970 aaKnown RBP7.52□□□□□ -1.21
ATXN3-223ENST00000553686 TEX51A0A1B0GUA7 166 aa7.52□□□□□ -1.21
ATXN3-223ENST00000553686 B2RBV5 119 aa7.52□□□□□ -1.21
ATXN3-223ENST00000553686 PDHXO00330 501 aa7.52□□□□□ -1.21
ATXN3-223ENST00000553686 MSL3P1P0C860 447 aa7.52□□□□□ -1.21
ATXN3-223ENST00000553686 GLDCP23378 1020 aa7.52□□□□□ -1.21
ATXN3-223ENST00000553686 SRSF3P84103 164 aaKnown RBP7.52□□□□□ -1.21
ATXN3-223ENST00000553686 SV2CQ496J9 727 aa7.52□□□□□ -1.21
ATXN3-223ENST00000553686 POMZP3Q6PJE2 187 aa7.52□□□□□ -1.21
ATXN3-223ENST00000553686 LRP10Q7Z4F1 713 aa7.52□□□□□ -1.21
ATXN3-223ENST00000553686 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.52□□□□□ -1.21
ATXN3-223ENST00000553686 PARK7Q99497 189 aaKnown RBP7.52□□□□□ -1.21
ATXN3-223ENST00000553686 SGPP1Q9BX95 441 aa7.52□□□□□ -1.21
ATXN3-223ENST00000553686 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.52□□□□□ -1.211e-11■■■■□ 25.2
ATXN3-223ENST00000553686 GABRQQ9UN88 632 aa7.52□□□□□ -1.21
ATXN3-223ENST00000553686 BACE2Q9Y5Z0 518 aa7.52□□□□□ -1.21
ATXN3-223ENST00000553686 MED23Q9ULK4 1368 aa7.51□□□□□ -1.21
ATXN3-223ENST00000553686 A0A1W2PQJ5 194 aa7.51□□□□□ -1.21
ATXN3-223ENST00000553686 TCAF2A6NFQ2 919 aa7.51□□□□□ -1.21
ATXN3-223ENST00000553686 L1CAMP32004 1257 aa7.51□□□□□ -1.21
ATXN3-223ENST00000553686 RBM5P52756 815 aaKnown RBP eCLIP7.51□□□□□ -1.21
ATXN3-223ENST00000553686 YBX1P67809 324 aaKnown RBP7.51□□□□□ -1.21
ATXN3-223ENST00000553686 DLG4P78352 724 aa7.51□□□□□ -1.21
ATXN3-223ENST00000553686 PPIL2Q13356 520 aa7.51□□□□□ -1.21
ATXN3-223ENST00000553686 RAB3GAP1Q15042 981 aa7.51□□□□□ -1.21
ATXN3-223ENST00000553686 CFAP100Q494V2 611 aa7.51□□□□□ -1.21
ATXN3-223ENST00000553686 ANKS3Q6ZW76 656 aa7.51□□□□□ -1.21
ATXN3-223ENST00000553686 CRACR2BQ8N4Y2 399 aaPredicted RBP7.51□□□□□ -1.21
ATXN3-223ENST00000553686 COA7Q96BR5 231 aa7.51□□□□□ -1.21
ATXN3-223ENST00000553686 HOOK2Q96ED9 719 aa7.51□□□□□ -1.21
ATXN3-223ENST00000553686 PRMT6Q96LA8 375 aaPredicted RBP7.51□□□□□ -1.21
ATXN3-223ENST00000553686 LRFN3Q9BTN0 628 aa7.51□□□□□ -1.21
ATXN3-223ENST00000553686 LGR4Q9BXB1 951 aa7.51□□□□□ -1.21
ATXN3-223ENST00000553686 SIRT5Q9NXA8 310 aa7.51□□□□□ -1.21
ATXN3-223ENST00000553686 SMG5Q9UPR3 1016 aaKnown RBP7.51□□□□□ -1.21
ATXN3-223ENST00000553686 KDM3BQ7LBC6 1761 aa7.51□□□□□ -1.21
ATXN3-223ENST00000553686 MUC3AQ02505 3323 aa7.5□□□□□ -1.21
ATXN3-223ENST00000553686 NPIPB6E9PJ23 425 aa7.5□□□□□ -1.21
ATXN3-223ENST00000553686 ABLIM1O14639 778 aa7.5□□□□□ -1.21
ATXN3-223ENST00000553686 TNPO2O14787 897 aaKnown RBP7.5□□□□□ -1.21
ATXN3-223ENST00000553686 SEMA7AO75326 666 aa7.5□□□□□ -1.21
ATXN3-223ENST00000553686 MED14OSP0DP75 135 aa7.5□□□□□ -1.21
ATXN3-223ENST00000553686 VIPR1P32241 457 aa7.5□□□□□ -1.21
ATXN3-223ENST00000553686 JAG1P78504 1218 aa7.5□□□□□ -1.21
ATXN3-223ENST00000553686 PPATQ06203 517 aa7.5□□□□□ -1.21
ATXN3-223ENST00000553686 TMEM31Q5JXX7 168 aa7.5□□□□□ -1.21
ATXN3-223ENST00000553686 CPNE8Q86YQ8 564 aa7.5□□□□□ -1.21
ATXN3-223ENST00000553686 MRGPRX3Q96LB0 322 aa7.5□□□□□ -1.21
ATXN3-223ENST00000553686 CFAP53Q96M91 514 aa7.5□□□□□ -1.21
ATXN3-223ENST00000553686 CDC5LQ99459 802 aaKnown RBP7.5□□□□□ -1.21
ATXN3-223ENST00000553686 TTYH1Q9H313 450 aaPredicted RBP7.5□□□□□ -1.21
ATXN3-223ENST00000553686 GPRC5CQ9NQ84 441 aa7.5□□□□□ -1.21
ATXN3-223ENST00000553686 PDLIM7Q9NR12 457 aa7.5□□□□□ -1.21
ATXN3-223ENST00000553686 ST7Q9NRC1 585 aa7.5□□□□□ -1.21
ATXN3-223ENST00000553686 KLHL14Q9P2G3 628 aa7.5□□□□□ -1.21
ATXN3-223ENST00000553686 LRP2BPQ9P2M1 347 aa7.5□□□□□ -1.21
ATXN3-223ENST00000553686 THEGQ9P2T0 379 aa7.5□□□□□ -1.21
ATXN3-223ENST00000553686 OGDHLQ9ULD0 1010 aa7.5□□□□□ -1.21
ATXN3-223ENST00000553686 SSC5DA1L4H1 1573 aa7.5□□□□□ -1.21
ATXN3-223ENST00000553686 NPHP3-ACAD11A0A0J9YXS1 232 aa7.49□□□□□ -1.21
ATXN3-223ENST00000553686 NUDT19A8MXV4 375 aa7.49□□□□□ -1.21
ATXN3-223ENST00000553686 HRKO00198 91 aa7.49□□□□□ -1.21
ATXN3-223ENST00000553686 PAMP19021 973 aa7.49□□□□□ -1.21
ATXN3-223ENST00000553686 CCT4P50991 539 aaKnown RBP7.49□□□□□ -1.21
ATXN3-223ENST00000553686 NAALADL2Q58DX5 795 aa7.49□□□□□ -1.21
ATXN3-223ENST00000553686 GTF2IRD2BQ6EKJ0 949 aa7.49□□□□□ -1.21
ATXN3-223ENST00000553686 GTF2IRD2Q86UP8 949 aa7.49□□□□□ -1.21
ATXN3-223ENST00000553686 CILP2Q8IUL8 1156 aa7.49□□□□□ -1.21
ATXN3-223ENST00000553686 TRIM59Q8IWR1 403 aa7.49□□□□□ -1.21
ATXN3-223ENST00000553686 ZBTB38Q8NAP3 1195 aaPredicted RBP7.49□□□□□ -1.21
ATXN3-223ENST00000553686 PLBD2Q8NHP8 589 aa7.49□□□□□ -1.21
ATXN3-223ENST00000553686 HNRNPLLQ8WVV9 542 aaKnown RBP7.49□□□□□ -1.21
ATXN3-223ENST00000553686 TOX2Q96NM4 488 aa7.49□□□□□ -1.21
ATXN3-223ENST00000553686 ISCA1Q9BUE6 129 aa7.49□□□□□ -1.21
ATXN3-223ENST00000553686 TNFRSF12AQ9NP84 129 aa7.49□□□□□ -1.21
ATXN3-223ENST00000553686 CYP26B1Q9NR63 512 aa7.49□□□□□ -1.21
ATXN3-223ENST00000553686 F8W031 263 aaPredicted RBP7.48□□□□□ -1.21
ATXN3-223ENST00000553686 SUSD5O60279 629 aa7.48□□□□□ -1.21
ATXN3-223ENST00000553686 PDE8AO60658 829 aa7.48□□□□□ -1.21
ATXN3-223ENST00000553686 GJB6O95452 261 aa7.48□□□□□ -1.21
ATXN3-223ENST00000553686 HMGCRP04035 888 aa7.48□□□□□ -1.21
ATXN3-223ENST00000553686 ANXA1P04083 346 aa7.48□□□□□ -1.21
ATXN3-223ENST00000553686 ITGAVP06756 1048 aa7.48□□□□□ -1.21
ATXN3-223ENST00000553686 U2AF1L5P0DN76 240 aaPredicted RBP7.48□□□□□ -1.21
ATXN3-223ENST00000553686 TACR1P25103 407 aa7.48□□□□□ -1.21
ATXN3-223ENST00000553686 CFPP27918 469 aa7.48□□□□□ -1.21
ATXN3-223ENST00000553686 MRE11P49959 708 aa7.48□□□□□ -1.21
ATXN3-223ENST00000553686 U2AF1Q01081 240 aaKnown RBP eCLIP7.48□□□□□ -1.21
ATXN3-223ENST00000553686 SCRN1Q12765 414 aa7.48□□□□□ -1.21
ATXN3-223ENST00000553686 CBX2Q14781 532 aaPredicted RBP7.48□□□□□ -1.21
ATXN3-223ENST00000553686 SHHQ15465 462 aa7.48□□□□□ -1.21
ATXN3-223ENST00000553686 KCNA10Q16322 511 aa7.48□□□□□ -1.21
ATXN3-223ENST00000553686 PROSER3Q2NL68 480 aa7.48□□□□□ -1.21
ATXN3-223ENST00000553686 OLFML2BQ68BL8 750 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms