RNA–Protein interactions for RNA: ENST00000553636.1

CCNK-202, Transcript of cyclin K, humanhuman

TSL 2

Gene CCNK, Length 546 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNK-202ENST00000553636 NEK9Q8TD19 979 aa12.97□□□□□ -0.33
CCNK-202ENST00000553636 PSPC1Q8WXF1 523 aaKnown RBP12.97□□□□□ -0.33
CCNK-202ENST00000553636 CCDC43Q96MW1 224 aaKnown RBP12.97□□□□□ -0.33
CCNK-202ENST00000553636 PLVAPQ9BX97 442 aa12.97□□□□□ -0.33
CCNK-202ENST00000553636 LMAN2LQ9H0V9 348 aa12.97□□□□□ -0.33
CCNK-202ENST00000553636 NSUN3Q9H649 340 aaKnown RBP12.97□□□□□ -0.33
CCNK-202ENST00000553636 ELAC1Q9H777 363 aaKnown RBP12.97□□□□□ -0.33
CCNK-202ENST00000553636 UBE2ZQ9H832 354 aaPredicted RBP12.97□□□□□ -0.33
CCNK-202ENST00000553636 PPME1Q9Y570 386 aa12.97□□□□□ -0.33
CCNK-202ENST00000553636 CD2BP2O95400 341 aaKnown RBP12.96□□□□□ -0.33
CCNK-202ENST00000553636 OR52Z1P0C646 297 aa12.96□□□□□ -0.33
CCNK-202ENST00000553636 SRGAP2CP0DJJ0 459 aa12.96□□□□□ -0.33
CCNK-202ENST00000553636 TWF2Q6IBS0 349 aaKnown RBP12.96□□□□□ -0.33
CCNK-202ENST00000553636 EP400NLQ6ZTU2 488 aa12.96□□□□□ -0.33
CCNK-202ENST00000553636 CATSPER4Q7RTX7 472 aa12.96□□□□□ -0.33
CCNK-202ENST00000553636 NOSTRINQ8IVI9 506 aa12.96□□□□□ -0.33
CCNK-202ENST00000553636 EXOC8Q8IYI6 725 aa12.96□□□□□ -0.33
CCNK-202ENST00000553636 ABI1Q8IZP0 508 aa12.96□□□□□ -0.33
CCNK-202ENST00000553636 KLHL23Q8NBE8 558 aa12.96□□□□□ -0.33
CCNK-202ENST00000553636 SPDYE1Q8NFV5 336 aaPredicted RBP12.96□□□□□ -0.33
CCNK-202ENST00000553636 TCP11Q8WWU5 503 aa12.96□□□□□ -0.33
CCNK-202ENST00000553636 PRPF31Q8WWY3 499 aaKnown RBP12.96□□□□□ -0.33
CCNK-202ENST00000553636 P2RX5Q93086 422 aa12.96□□□□□ -0.33
CCNK-202ENST00000553636 TMX3Q96JJ7 454 aa12.96□□□□□ -0.33
CCNK-202ENST00000553636 NECAB3Q96P71 396 aaPredicted RBP12.96□□□□□ -0.33
CCNK-202ENST00000553636 UHRF1Q96T88 793 aaPredicted RBP12.96□□□□□ -0.33
CCNK-202ENST00000553636 MTRQ99707 1265 aa12.96□□□□□ -0.33
CCNK-202ENST00000553636 HSD17B14Q9BPX1 270 aa12.96□□□□□ -0.33
CCNK-202ENST00000553636 RNF19AQ9NV58 838 aa12.96□□□□□ -0.33
CCNK-202ENST00000553636 DACT1Q9NYF0 836 aa12.96□□□□□ -0.33
CCNK-202ENST00000553636 NOL7Q9UMY1 257 aaKnown RBP12.96□□□□□ -0.33
CCNK-202ENST00000553636 PLAGL2Q9UPG8 496 aa12.96□□□□□ -0.33
CCNK-202ENST00000553636 PIN4Q9Y237 131 aaKnown RBP12.96□□□□□ -0.33
CCNK-202ENST00000553636 BRWD1Q9NSI6 2320 aa12.96□□□□□ -0.34
CCNK-202ENST00000553636 A0A087WWV3 80 aa12.95□□□□□ -0.34
CCNK-202ENST00000553636 HOXA2O43364 376 aa12.95□□□□□ -0.34
CCNK-202ENST00000553636 GAS2O43903 313 aaKnown RBP12.95□□□□□ -0.34
CCNK-202ENST00000553636 ITGB1P05556 798 aa12.95□□□□□ -0.34
CCNK-202ENST00000553636 BMP1P13497 986 aa12.95□□□□□ -0.34
CCNK-202ENST00000553636 KCNA5P22460 613 aa12.95□□□□□ -0.34
CCNK-202ENST00000553636 DNAJB1P25685 340 aa12.95□□□□□ -0.34
CCNK-202ENST00000553636 LAMTOR4Q0VGL1 99 aa12.95□□□□□ -0.34
CCNK-202ENST00000553636 NBR1Q14596 966 aa12.95□□□□□ -0.34
CCNK-202ENST00000553636 PIGOQ8TEQ8 1089 aa12.95□□□□□ -0.34
CCNK-202ENST00000553636 TBC1D32Q96NH3 1257 aa12.95□□□□□ -0.34
CCNK-202ENST00000553636 INO80BQ9C086 356 aaPredicted RBP12.95□□□□□ -0.34
CCNK-202ENST00000553636 TMEM117Q9H0C3 514 aa12.95□□□□□ -0.34
CCNK-202ENST00000553636 IFT122Q9HBG6 1241 aa12.95□□□□□ -0.34
CCNK-202ENST00000553636 XPNPEP1Q9NQW7 623 aa12.95□□□□□ -0.34
CCNK-202ENST00000553636 AAASQ9NRG9 546 aa12.95□□□□□ -0.34
CCNK-202ENST00000553636 ANKEF1Q9NU02 776 aa12.95□□□□□ -0.34
CCNK-202ENST00000553636 TYW1Q9NV66 732 aaKnown RBP12.95□□□□□ -0.34
CCNK-202ENST00000553636 KIF3AQ9Y496 699 aa12.95□□□□□ -0.34
CCNK-202ENST00000553636 PCDHB12Q9Y5F1 795 aa12.95□□□□□ -0.34
CCNK-202ENST00000553636 MYO7AQ13402 2215 aa12.94□□□□□ -0.34
CCNK-202ENST00000553636 TTC28Q96AY4 2481 aa12.94□□□□□ -0.34
CCNK-202ENST00000553636 A0A0U1RQF3 1178 aa12.94□□□□□ -0.34
CCNK-202ENST00000553636 LYPLA2O95372 231 aa12.94□□□□□ -0.34
CCNK-202ENST00000553636 ATF7P17544 494 aaPredicted RBP12.94□□□□□ -0.34
CCNK-202ENST00000553636 TECP42680 631 aa12.94□□□□□ -0.34
CCNK-202ENST00000553636 ORC2Q13416 577 aaPredicted RBP12.94□□□□□ -0.34
CCNK-202ENST00000553636 CAMK1Q14012 370 aa12.94□□□□□ -0.34
CCNK-202ENST00000553636 LONRF3Q496Y0 759 aa12.94□□□□□ -0.34
CCNK-202ENST00000553636 NAALADL2Q58DX5 795 aa12.94□□□□□ -0.34
CCNK-202ENST00000553636 CLLU1OSQ5K130 101 aa12.94□□□□□ -0.34
CCNK-202ENST00000553636 FERMT3Q86UX7 667 aa12.94□□□□□ -0.34
CCNK-202ENST00000553636 LRRC43Q8N309 656 aa12.94□□□□□ -0.34
CCNK-202ENST00000553636 COLGALT1Q8NBJ5 622 aa12.94□□□□□ -0.34
CCNK-202ENST00000553636 RNF149Q8NC42 400 aa12.94□□□□□ -0.34
CCNK-202ENST00000553636 SPPL3Q8TCT6 385 aa12.94□□□□□ -0.34
CCNK-202ENST00000553636 HELQQ8TDG4 1101 aa12.94□□□□□ -0.34
CCNK-202ENST00000553636 POF1BQ8WVV4 589 aa12.94□□□□□ -0.34
CCNK-202ENST00000553636 CASD1Q96PB1 797 aa12.94□□□□□ -0.34
CCNK-202ENST00000553636 CHST12Q9NRB3 414 aa12.94□□□□□ -0.34
CCNK-202ENST00000553636 AGPAT5Q9NUQ2 364 aa12.94□□□□□ -0.34
CCNK-202ENST00000553636 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.93□□□□□ -0.34
CCNK-202ENST00000553636 SPDYE4A6NLX3 237 aa12.93□□□□□ -0.34
CCNK-202ENST00000553636 H3BQ06 376 aaPredicted RBP12.93□□□□□ -0.34
CCNK-202ENST00000553636 TNFRSF10AO00220 468 aa12.93□□□□□ -0.34
CCNK-202ENST00000553636 USO1O60763 962 aaKnown RBP12.93□□□□□ -0.34
CCNK-202ENST00000553636 MED24O75448 989 aa12.93□□□□□ -0.34
CCNK-202ENST00000553636 DGAT1O75907 488 aa12.93□□□□□ -0.34
CCNK-202ENST00000553636 LAG3P18627 525 aa12.93□□□□□ -0.34
CCNK-202ENST00000553636 GJB2P29033 226 aa12.93□□□□□ -0.34
CCNK-202ENST00000553636 IRS1P35568 1242 aa12.93□□□□□ -0.34
CCNK-202ENST00000553636 PHKA2P46019 1235 aa12.93□□□□□ -0.34
CCNK-202ENST00000553636 TRAPPC10P48553 1259 aa12.93□□□□□ -0.34
CCNK-202ENST00000553636 RARRES1P49788 294 aa12.93□□□□□ -0.34
CCNK-202ENST00000553636 HYAL1Q12794 435 aa12.93□□□□□ -0.34
CCNK-202ENST00000553636 MCTP1Q6DN14 999 aa12.93□□□□□ -0.34
CCNK-202ENST00000553636 POTEGQ6S5H5 508 aa12.93□□□□□ -0.34
CCNK-202ENST00000553636 ZNF598Q86UK7 904 aaKnown RBP12.93□□□□□ -0.34
CCNK-202ENST00000553636 THNSL1Q8IYQ7 743 aa12.93□□□□□ -0.34
CCNK-202ENST00000553636 LPPQ93052 612 aa12.93□□□□□ -0.34
CCNK-202ENST00000553636 IGFLR1Q9H665 355 aa12.93□□□□□ -0.34
CCNK-202ENST00000553636 CWH43Q9H720 699 aa12.93□□□□□ -0.34
CCNK-202ENST00000553636 MINDY3Q9H8M7 445 aa12.93□□□□□ -0.34
CCNK-202ENST00000553636 TUFT1Q9NNX1 390 aa12.93□□□□□ -0.34
CCNK-202ENST00000553636 FAM105AQ9NUU6 356 aa12.93□□□□□ -0.34
CCNK-202ENST00000553636 CLDND1Q9NY35 253 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms