RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 GIT2Q14161 759 aa5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 HLTFQ14527 1009 aaKnown RBP eCLIP5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 GRIK5Q16478 980 aa5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 ECM1Q16610 540 aa5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 NBPF9Q3BBW0 867 aa5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 Q3C1V9 767 aa5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 ARSHQ5FYA8 562 aa5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 HERC4Q5GLZ8 1057 aaPredicted RBP5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 MFSD14BQ5SR56 506 aa5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 HHIPL2Q6UWX4 724 aa5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 BTNL9Q6UXG8 535 aa5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 STXBP4Q6ZWJ1 553 aa5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 ZNF571Q7Z3V5 609 aaPredicted RBP5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 PEX26Q7Z412 305 aa5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 SLC9A9Q8IVB4 645 aa5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 RHOT2Q8IXI1 618 aa5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 SH2D3CQ8N5H7 860 aa5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 ANKRD13CQ8N6S4 541 aa5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 CNBD1Q8NA66 436 aa5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 GLIS3Q8NEA6 775 aa5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 MORC4Q8TE76 937 aa5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 LRRN4Q8WUT4 740 aa5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 MKL1Q969V6 931 aa5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 BORCS6Q96GS4 357 aa5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 CRAMP1Q96RY5 1269 aa5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 MYCBPQ99417 103 aaPredicted RBP5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 PSMB7Q99436 277 aa5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 PSMD1Q99460 953 aa5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 ANO3Q9BYT9 981 aa5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 COA1Q9GZY4 146 aa5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 STMN4Q9H169 189 aaPredicted RBP5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 PLEKHA4Q9H4M7 779 aa5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 TUFT1Q9NNX1 390 aa5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 SMARCAL1Q9NZC9 954 aa5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 NYAP2Q9P242 653 aa5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 PARP2Q9UGN5 583 aa5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 SAP30BPQ9UHR5 308 aaKnown RBP5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 CNOT7Q9UIV1 285 aaKnown RBP5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 USP20Q9Y2K6 914 aa5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 UTP11Q9Y3A2 253 aaKnown RBP5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 DAGLAQ9Y4D2 1042 aa5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 MYH10P35580 1976 aa5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 RBBP6Q7Z6E9 1792 aaKnown RBP5.7□□□□□ -1.5
TMEM55B-204ENST00000553602 ZMYM2Q9UBW7 1377 aa5.7□□□□□ -1.5
TMEM55B-204ENST00000553602 SIPA1L1O43166 1804 aa5.7□□□□□ -1.5
TMEM55B-204ENST00000553602 ESYT3A0FGR9 886 aa5.7□□□□□ -1.5
TMEM55B-204ENST00000553602 POTEB3A0JP26 581 aa5.7□□□□□ -1.5
TMEM55B-204ENST00000553602 CCDC169A6NNP5 214 aa5.7□□□□□ -1.5
TMEM55B-204ENST00000553602 POTECB2RU33 542 aa5.7□□□□□ -1.5
TMEM55B-204ENST00000553602 KRIT1O00522 736 aa5.7□□□□□ -1.5
TMEM55B-204ENST00000553602 DDX3XO00571 662 aaKnown RBP eCLIP5.7□□□□□ -1.5
TMEM55B-204ENST00000553602 MAPK13O15264 365 aa5.7□□□□□ -1.5
TMEM55B-204ENST00000553602 P4HA2O15460 535 aa5.7□□□□□ -1.5
TMEM55B-204ENST00000553602 ASAP2O43150 1006 aa5.7□□□□□ -1.5
TMEM55B-204ENST00000553602 CEP104O60308 925 aa5.7□□□□□ -1.5
TMEM55B-204ENST00000553602 TBCAO75347 108 aaKnown RBP5.7□□□□□ -1.5
TMEM55B-204ENST00000553602 MED24O75448 989 aa5.7□□□□□ -1.5
TMEM55B-204ENST00000553602 AKAP3O75969 853 aa5.7□□□□□ -1.5
TMEM55B-204ENST00000553602 UFL1O94874 794 aa5.7□□□□□ -1.5
TMEM55B-204ENST00000553602 NR3C1P04150 777 aa5.7□□□□□ -1.5
TMEM55B-204ENST00000553602 HLA-DOAP06340 250 aa5.7□□□□□ -1.5
TMEM55B-204ENST00000553602 AKR1B1P15121 316 aa5.7□□□□□ -1.5
TMEM55B-204ENST00000553602 SHMT1P34896 483 aa5.7□□□□□ -1.5
TMEM55B-204ENST00000553602 HOXD13P35453 343 aa5.7□□□□□ -1.5
TMEM55B-204ENST00000553602 SOX5P35711 763 aa5.7□□□□□ -1.5
TMEM55B-204ENST00000553602 ATP1A2P50993 1020 aa5.7□□□□□ -1.5
TMEM55B-204ENST00000553602 GUCY2FP51841 1108 aa5.7□□□□□ -1.5
TMEM55B-204ENST00000553602 ZNF131P52739 623 aa5.7□□□□□ -1.5
TMEM55B-204ENST00000553602 FKBP1AP62942 108 aaKnown RBP5.7□□□□□ -1.5
TMEM55B-204ENST00000553602 IRX3P78415 501 aaPredicted RBP5.7□□□□□ -1.5
TMEM55B-204ENST00000553602 GPSM2P81274 684 aa5.7□□□□□ -1.5
TMEM55B-204ENST00000553602 ARHGAP4P98171 946 aa5.7□□□□□ -1.5
TMEM55B-204ENST00000553602 HDLBPQ00341 1268 aaKnown RBP5.7□□□□□ -1.5
TMEM55B-204ENST00000553602 ATP2B2Q01814 1243 aa5.7□□□□□ -1.5
TMEM55B-204ENST00000553602 XRCC4Q13426 336 aa5.7□□□□□ -1.5
TMEM55B-204ENST00000553602 ALCAMQ13740 583 aa5.7□□□□□ -1.5
TMEM55B-204ENST00000553602 ITIH4Q14624 930 aa5.7□□□□□ -1.5
TMEM55B-204ENST00000553602 KIF22Q14807 665 aa5.7□□□□□ -1.5
TMEM55B-204ENST00000553602 NFIXQ14938 502 aa5.7□□□□□ -1.5
TMEM55B-204ENST00000553602 LRRC41Q15345 812 aa5.7□□□□□ -1.5
TMEM55B-204ENST00000553602 VPS72Q15906 364 aa5.7□□□□□ -1.5
TMEM55B-204ENST00000553602 CYP1B1Q16678 543 aa5.7□□□□□ -1.5
TMEM55B-204ENST00000553602 UBE2SQ16763 222 aa5.7□□□□□ -1.5
TMEM55B-204ENST00000553602 TNFAIP8L3Q5GJ75 292 aa5.7□□□□□ -1.5
TMEM55B-204ENST00000553602 GKAP1Q5VSY0 366 aaPredicted RBP5.7□□□□□ -1.5
TMEM55B-204ENST00000553602 DUPD1Q68J44 220 aa5.7□□□□□ -1.5
TMEM55B-204ENST00000553602 MFSD5Q6N075 450 aa5.7□□□□□ -1.5
TMEM55B-204ENST00000553602 POTEBQ6S5H4 581 aa5.7□□□□□ -1.5
TMEM55B-204ENST00000553602 CCDC121Q6ZUS5 278 aa5.7□□□□□ -1.5
TMEM55B-204ENST00000553602 RETREG3Q86VR2 466 aa5.7□□□□□ -1.5
TMEM55B-204ENST00000553602 SFR1Q86XK3 245 aa5.7□□□□□ -1.5
TMEM55B-204ENST00000553602 C12orf56Q8IXR9 622 aa5.7□□□□□ -1.5
TMEM55B-204ENST00000553602 CCDC13Q8IYE1 715 aa5.7□□□□□ -1.5
TMEM55B-204ENST00000553602 CACNA2D3Q8IZS8 1091 aa5.7□□□□□ -1.5
TMEM55B-204ENST00000553602 LRRC47Q8N1G4 583 aaKnown RBP5.7□□□□□ -1.5
TMEM55B-204ENST00000553602 GMCL1P1Q8NEA9 526 aa5.7□□□□□ -1.5
TMEM55B-204ENST00000553602 PRR7Q8TB68 274 aa5.7□□□□□ -1.5
TMEM55B-204ENST00000553602 NEK9Q8TD19 979 aa5.7□□□□□ -1.5
TMEM55B-204ENST00000553602 ATP8B4Q8TF62 1192 aa5.7□□□□□ -1.5
TMEM55B-204ENST00000553602 IFT81Q8WYA0 676 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms