RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 EVPLQ92817 2033 aa17.07■□□□□ 0.32
SHMT2-204ENST00000553324 A0A0U1RQF3 1178 aa17.06■□□□□ 0.32
SHMT2-204ENST00000553324 EPOPA6NHQ4 379 aa17.06■□□□□ 0.32
SHMT2-204ENST00000553324 RFXAPO00287 272 aa17.06■□□□□ 0.32
SHMT2-204ENST00000553324 PDIA4P13667 645 aaKnown RBP17.06■□□□□ 0.32
SHMT2-204ENST00000553324 BMPR1AP36894 532 aa17.06■□□□□ 0.32
SHMT2-204ENST00000553324 ATP2C1P98194 919 aaPredicted RBP17.06■□□□□ 0.32
SHMT2-204ENST00000553324 PTPROQ16827 1216 aa17.06■□□□□ 0.32
SHMT2-204ENST00000553324 CATSPER4Q7RTX7 472 aa17.06■□□□□ 0.32
SHMT2-204ENST00000553324 KSR1Q8IVT5 923 aa17.06■□□□□ 0.32
SHMT2-204ENST00000553324 RNF149Q8NC42 400 aa17.06■□□□□ 0.32
SHMT2-204ENST00000553324 RSPH1Q8WYR4 309 aa17.06■□□□□ 0.32
SHMT2-204ENST00000553324 PLVAPQ9BX97 442 aa17.06■□□□□ 0.32
SHMT2-204ENST00000553324 TTC3P53804 2025 aa17.05■□□□□ 0.32
SHMT2-204ENST00000553324 ARHGEF35A5YM69 484 aa17.05■□□□□ 0.32
SHMT2-204ENST00000553324 C5orf67F2Z3F1 127 aa17.05■□□□□ 0.32
SHMT2-204ENST00000553324 H3BNC9 293 aa17.05■□□□□ 0.32
SHMT2-204ENST00000553324 RBAK-RBAKDNI3L0D1 243 aa17.05■□□□□ 0.32
SHMT2-204ENST00000553324 CSDE1O75534 798 aaKnown RBP17.05■□□□□ 0.32
SHMT2-204ENST00000553324 ARL2P36404 184 aa17.05■□□□□ 0.32
SHMT2-204ENST00000553324 PHKA2P46019 1235 aa17.05■□□□□ 0.32
SHMT2-204ENST00000553324 NAALADL2Q58DX5 795 aa17.05■□□□□ 0.32
SHMT2-204ENST00000553324 HSCBQ8IWL3 235 aa17.05■□□□□ 0.32
SHMT2-204ENST00000553324 XPNPEP1Q9NQW7 623 aa17.05■□□□□ 0.32
SHMT2-204ENST00000553324 BMP2KQ9NSY1 1161 aaPredicted RBP17.05■□□□□ 0.32
SHMT2-204ENST00000553324 KIAA1024Q9UPX6 916 aa17.05■□□□□ 0.32
SHMT2-204ENST00000553324 DNM3Q9UQ16 869 aa17.05■□□□□ 0.32
SHMT2-204ENST00000553324 EYSQ5T1H1 3165 aa17.04■□□□□ 0.32
SHMT2-204ENST00000553324 MYO9BQ13459 2157 aa17.04■□□□□ 0.32
SHMT2-204ENST00000553324 VPS37CA5D8V6 355 aaPredicted RBP17.04■□□□□ 0.32
SHMT2-204ENST00000553324 LPXNO60711 386 aa17.04■□□□□ 0.32
SHMT2-204ENST00000553324 SYT1P21579 422 aa17.04■□□□□ 0.32
SHMT2-204ENST00000553324 FGFR4P22455 802 aa17.04■□□□□ 0.32
SHMT2-204ENST00000553324 PTENP60484 403 aa17.04■□□□□ 0.32
SHMT2-204ENST00000553324 GPM6BQ13491 265 aa17.04■□□□□ 0.32
SHMT2-204ENST00000553324 POTEGQ6S5H5 508 aa17.04■□□□□ 0.32
SHMT2-204ENST00000553324 ECHDC2Q86YB7 292 aa17.04■□□□□ 0.32
SHMT2-204ENST00000553324 ABI1Q8IZP0 508 aa17.04■□□□□ 0.32
SHMT2-204ENST00000553324 SNX29Q8TEQ0 813 aa17.04■□□□□ 0.32
SHMT2-204ENST00000553324 PPM1EQ8WY54 764 aa17.04■□□□□ 0.32
SHMT2-204ENST00000553324 AK8Q96MA6 479 aa17.04■□□□□ 0.32
SHMT2-204ENST00000553324 C11orf84Q9BUA3 381 aaPredicted RBP17.04■□□□□ 0.32
SHMT2-204ENST00000553324 NFKBIZQ9BYH8 718 aa17.04■□□□□ 0.32
SHMT2-204ENST00000553324 AAASQ9NRG9 546 aa17.04■□□□□ 0.32
SHMT2-204ENST00000553324 COL4A6Q14031 1691 aa17.04■□□□□ 0.32
SHMT2-204ENST00000553324 WDR81Q562E7 1941 aa17.04■□□□□ 0.32
SHMT2-204ENST00000553324 USO1O60763 962 aaKnown RBP17.03■□□□□ 0.32
SHMT2-204ENST00000553324 CYP11B2P19099 503 aa17.03■□□□□ 0.32
SHMT2-204ENST00000553324 IBSPP21815 317 aaPredicted RBP17.03■□□□□ 0.32
SHMT2-204ENST00000553324 AXLP30530 894 aa17.03■□□□□ 0.32
SHMT2-204ENST00000553324 CTNNB1P35222 781 aa17.03■□□□□ 0.32
SHMT2-204ENST00000553324 RAB27AP51159 221 aa17.03■□□□□ 0.32
SHMT2-204ENST00000553324 CCDC85BQ15834 202 aaPredicted RBP17.03■□□□□ 0.32
SHMT2-204ENST00000553324 IL17AQ16552 155 aa17.03■□□□□ 0.32
SHMT2-204ENST00000553324 TWF2Q6IBS0 349 aaKnown RBP17.03■□□□□ 0.32
SHMT2-204ENST00000553324 PADI6Q6TGC4 694 aa17.03■□□□□ 0.32
SHMT2-204ENST00000553324 SPRED2Q7Z698 418 aa17.03■□□□□ 0.32
SHMT2-204ENST00000553324 IFNLR1Q8IU57 520 aaPredicted RBP17.03■□□□□ 0.32
SHMT2-204ENST00000553324 GDPD5Q8WTR4 605 aa17.03■□□□□ 0.32
SHMT2-204ENST00000553324 TMEM117Q9H0C3 514 aa17.03■□□□□ 0.32
SHMT2-204ENST00000553324 ZSCAN16Q9H4T2 348 aaPredicted RBP17.03■□□□□ 0.32
SHMT2-204ENST00000553324 DDX19AQ9NUU7 478 aaKnown RBP17.03■□□□□ 0.32
SHMT2-204ENST00000553324 DAXXQ9UER7 740 aaPredicted RBP17.03■□□□□ 0.32
SHMT2-204ENST00000553324 PIN4Q9Y237 131 aaKnown RBP17.03■□□□□ 0.32
SHMT2-204ENST00000553324 GBF1Q92538 1859 aa17.03■□□□□ 0.32
SHMT2-204ENST00000553324 A0A087WWV3 80 aa17.02■□□□□ 0.32
SHMT2-204ENST00000553324 TBKBP1A7MCY6 615 aa17.02■□□□□ 0.32
SHMT2-204ENST00000553324 SLC26A4O43511 780 aa17.02■□□□□ 0.32
SHMT2-204ENST00000553324 ZNF623O75123 536 aa17.02■□□□□ 0.32
SHMT2-204ENST00000553324 ERLIN2O94905 339 aa17.02■□□□□ 0.32
SHMT2-204ENST00000553324 CSPP1Q1MSJ5 1256 aa17.02■□□□□ 0.32
SHMT2-204ENST00000553324 FAM102BQ5T8I3 360 aa17.02■□□□□ 0.32
SHMT2-204ENST00000553324 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.02■□□□□ 0.32
SHMT2-204ENST00000553324 MICALL1Q8N3F8 863 aa17.02■□□□□ 0.32
SHMT2-204ENST00000553324 P2RX5Q93086 422 aa17.02■□□□□ 0.32
SHMT2-204ENST00000553324 PGBD4Q96DM1 585 aa17.02■□□□□ 0.32
SHMT2-204ENST00000553324 MRPL38Q96DV4 380 aaKnown RBP17.02■□□□□ 0.32
SHMT2-204ENST00000553324 NT5C3AQ9H0P0 336 aa17.02■□□□□ 0.32
SHMT2-204ENST00000553324 LMAN2LQ9H0V9 348 aa17.02■□□□□ 0.32
SHMT2-204ENST00000553324 POLR3FQ9H1D9 316 aaPredicted RBP17.02■□□□□ 0.32
SHMT2-204ENST00000553324 AGPAT5Q9NUQ2 364 aa17.02■□□□□ 0.32
SHMT2-204ENST00000553324 PCDHB12Q9Y5F1 795 aa17.02■□□□□ 0.32
SHMT2-204ENST00000553324 MRPL42Q9Y6G3 142 aaKnown RBP17.02■□□□□ 0.32
SHMT2-204ENST00000553324 SIP14410 1827 aa17.02■□□□□ 0.31
SHMT2-204ENST00000553324 PTPRSQ13332 1948 aa17.02■□□□□ 0.31
SHMT2-204ENST00000553324 VWA3AA6NCI4 1184 aa17.01■□□□□ 0.31
SHMT2-204ENST00000553324 EYA4O95677 639 aa17.01■□□□□ 0.31
SHMT2-204ENST00000553324 HSP90AA1P07900 732 aaKnown RBP17.01■□□□□ 0.31
SHMT2-204ENST00000553324 LINC00271P0C7V0 271 aa17.01■□□□□ 0.31
SHMT2-204ENST00000553324 GLRA2P23416 452 aa17.01■□□□□ 0.31
SHMT2-204ENST00000553324 ECM1Q16610 540 aa17.01■□□□□ 0.31
SHMT2-204ENST00000553324 PAN2Q504Q3 1202 aaKnown RBP17.01■□□□□ 0.31
SHMT2-204ENST00000553324 SPOUT1Q5T280 376 aaKnown RBP17.01■□□□□ 0.31
SHMT2-204ENST00000553324 MAEAQ7L5Y9 396 aa17.01■□□□□ 0.31
SHMT2-204ENST00000553324 CCDC51Q96ER9 411 aa17.01■□□□□ 0.31
SHMT2-204ENST00000553324 BHMT2Q9H2M3 363 aa17.01■□□□□ 0.31
SHMT2-204ENST00000553324 A0A0C4DFX4 3053 aa17■□□□□ 0.31
SHMT2-204ENST00000553324 PRUNE2Q8WUY3 3088 aa17■□□□□ 0.31
SHMT2-204ENST00000553324 CARNS1A5YM72 827 aa17■□□□□ 0.31
SHMT2-204ENST00000553324 INO80B-WBP1J3KQ70 363 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms