RNA–Protein interactions for RNA: ENST00000553145.1

HDAC4-217, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-217ENST00000553145 ATP2C1P98194 919 aaPredicted RBP20.92■□□□□ 0.94
HDAC4-217ENST00000553145 FAM102BQ5T8I3 360 aa20.92■□□□□ 0.94
HDAC4-217ENST00000553145 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.92■□□□□ 0.94
HDAC4-217ENST00000553145 ASAP3Q8TDY4 903 aa20.92■□□□□ 0.94
HDAC4-217ENST00000553145 CCDC43Q96MW1 224 aaKnown RBP20.92■□□□□ 0.94
HDAC4-217ENST00000553145 FOXD4L1Q9NU39 408 aa20.92■□□□□ 0.94
HDAC4-217ENST00000553145 TRANK1O15050 2925 aa20.91■□□□□ 0.94
HDAC4-217ENST00000553145 FGFR1P11362 822 aa20.91■□□□□ 0.94
HDAC4-217ENST00000553145 ZSCAN20P17040 1043 aaPredicted RBP20.91■□□□□ 0.94
HDAC4-217ENST00000553145 SFPQP23246 707 aaKnown RBP eCLIP20.91■□□□□ 0.94
HDAC4-217ENST00000553145 CTNNB1P35222 781 aa20.91■□□□□ 0.94
HDAC4-217ENST00000553145 CCT6AP40227 531 aaKnown RBP20.91■□□□□ 0.94
HDAC4-217ENST00000553145 PDIA5Q14554 519 aa20.91■□□□□ 0.94
HDAC4-217ENST00000553145 HAUS3Q68CZ6 603 aa20.91■□□□□ 0.94
HDAC4-217ENST00000553145 RNF149Q8NC42 400 aa20.91■□□□□ 0.94
HDAC4-217ENST00000553145 CLP1Q92989 425 aaKnown RBP20.91■□□□□ 0.94
HDAC4-217ENST00000553145 NACC1Q96RE7 527 aa20.91■□□□□ 0.94
HDAC4-217ENST00000553145 INO80BQ9C086 356 aaPredicted RBP20.91■□□□□ 0.94
HDAC4-217ENST00000553145 ELAC1Q9H777 363 aaKnown RBP20.91■□□□□ 0.94
HDAC4-217ENST00000553145 RNF19AQ9NV58 838 aa20.91■□□□□ 0.94
HDAC4-217ENST00000553145 TMEM161AQ9NX61 479 aa20.91■□□□□ 0.94
HDAC4-217ENST00000553145 DBR1Q9UK59 544 aaKnown RBP20.91■□□□□ 0.94
HDAC4-217ENST00000553145 PRRC2BQ5JSZ5 2229 aaKnown RBP20.9■□□□□ 0.94
HDAC4-217ENST00000553145 FNDC1Q4ZHG4 1894 aaPredicted RBP20.9■□□□□ 0.94
HDAC4-217ENST00000553145 VPS37CA5D8V6 355 aaPredicted RBP20.9■□□□□ 0.94
HDAC4-217ENST00000553145 CDC25AP30304 524 aa20.9■□□□□ 0.94
HDAC4-217ENST00000553145 ARL2P36404 184 aa20.9■□□□□ 0.94
HDAC4-217ENST00000553145 CAPSQ13938 189 aa20.9■□□□□ 0.94
HDAC4-217ENST00000553145 CATSPER4Q7RTX7 472 aa20.9■□□□□ 0.94
HDAC4-217ENST00000553145 ECHDC2Q86YB7 292 aa20.9■□□□□ 0.94
HDAC4-217ENST00000553145 SNX29Q8TEQ0 813 aa20.9■□□□□ 0.94
HDAC4-217ENST00000553145 INTS4Q96HW7 963 aaKnown RBP20.9■□□□□ 0.94
HDAC4-217ENST00000553145 GPRC5CQ9NQ84 441 aa20.9■□□□□ 0.94
HDAC4-217ENST00000553145 HCSTQ9UBK5 93 aa20.9■□□□□ 0.94
HDAC4-217ENST00000553145 TBKBP1A7MCY6 615 aa20.89■□□□□ 0.93
HDAC4-217ENST00000553145 C5orf67F2Z3F1 127 aa20.89■□□□□ 0.93
HDAC4-217ENST00000553145 H3BNC9 293 aa20.89■□□□□ 0.93
HDAC4-217ENST00000553145 ASAP2O43150 1006 aa20.89■□□□□ 0.93
HDAC4-217ENST00000553145 ATF7P17544 494 aaPredicted RBP20.89■□□□□ 0.93
HDAC4-217ENST00000553145 MUTP22033 750 aa20.89■□□□□ 0.93
HDAC4-217ENST00000553145 GLRA2P23416 452 aa20.89■□□□□ 0.93
HDAC4-217ENST00000553145 BMPR1AP36894 532 aa20.89■□□□□ 0.93
HDAC4-217ENST00000553145 GPM6BQ13491 265 aa20.89■□□□□ 0.93
HDAC4-217ENST00000553145 DTHD1Q6ZMT9 781 aa20.89■□□□□ 0.93
HDAC4-217ENST00000553145 SRGAP1Q7Z6B7 1085 aa20.89■□□□□ 0.93
HDAC4-217ENST00000553145 SNX21Q969T3 373 aa20.89■□□□□ 0.93
HDAC4-217ENST00000553145 MMTAG2Q9BU76 263 aaKnown RBP20.89■□□□□ 0.93
HDAC4-217ENST00000553145 POLR3FQ9H1D9 316 aaPredicted RBP20.89■□□□□ 0.93
HDAC4-217ENST00000553145 CHST12Q9NRB3 414 aa20.89■□□□□ 0.93
HDAC4-217ENST00000553145 PIN4Q9Y237 131 aaKnown RBP20.89■□□□□ 0.93
HDAC4-217ENST00000553145 A0A0U1RQF3 1178 aa20.88■□□□□ 0.93
HDAC4-217ENST00000553145 SYT1P21579 422 aa20.88■□□□□ 0.93
HDAC4-217ENST00000553145 MXD4Q14582 209 aaPredicted RBP20.88■□□□□ 0.93
HDAC4-217ENST00000553145 MAEAQ7L5Y9 396 aa20.88■□□□□ 0.93
HDAC4-217ENST00000553145 BRAPQ7Z569 592 aa20.88■□□□□ 0.93
HDAC4-217ENST00000553145 ZNF598Q86UK7 904 aaKnown RBP20.88■□□□□ 0.93
HDAC4-217ENST00000553145 RAB34Q9BZG1 259 aa20.88■□□□□ 0.93
HDAC4-217ENST00000553145 AGPAT5Q9NUQ2 364 aa20.88■□□□□ 0.93
HDAC4-217ENST00000553145 RNF216Q9NWF9 866 aaPredicted RBP20.88■□□□□ 0.93
HDAC4-217ENST00000553145 LMCD1Q9NZU5 365 aa20.88■□□□□ 0.93
HDAC4-217ENST00000553145 KIAA1024Q9UPX6 916 aa20.88■□□□□ 0.93
HDAC4-217ENST00000553145 PDCP20941 246 aa20.87■□□□□ 0.93
HDAC4-217ENST00000553145 PHKA2P46019 1235 aa20.87■□□□□ 0.93
HDAC4-217ENST00000553145 PTENP60484 403 aa20.87■□□□□ 0.93
HDAC4-217ENST00000553145 PADI6Q6TGC4 694 aa20.87■□□□□ 0.93
HDAC4-217ENST00000553145 IFNLR1Q8IU57 520 aaPredicted RBP20.87■□□□□ 0.93
HDAC4-217ENST00000553145 RNF169Q8NCN4 708 aa20.87■□□□□ 0.93
HDAC4-217ENST00000553145 DDX19AQ9NUU7 478 aaKnown RBP20.87■□□□□ 0.93
HDAC4-217ENST00000553145 DACT1Q9NYF0 836 aa20.87■□□□□ 0.93
HDAC4-217ENST00000553145 RWDD3Q9Y3V2 267 aa20.87■□□□□ 0.93
HDAC4-217ENST00000553145 ARHGEF35A5YM69 484 aa20.86■□□□□ 0.93
HDAC4-217ENST00000553145 VWA3AA6NCI4 1184 aa20.86■□□□□ 0.93
HDAC4-217ENST00000553145 RB1P06400 928 aa20.86■□□□□ 0.93
HDAC4-217ENST00000553145 RESTQ13127 1097 aa20.86■□□□□ 0.93
HDAC4-217ENST00000553145 TFDP1Q14186 410 aa20.86■□□□□ 0.93
HDAC4-217ENST00000553145 CLLU1OSQ5K130 101 aa20.86■□□□□ 0.93
HDAC4-217ENST00000553145 KRT79Q5XKE5 535 aa20.86■□□□□ 0.93
HDAC4-217ENST00000553145 TWF2Q6IBS0 349 aaKnown RBP20.86■□□□□ 0.93
HDAC4-217ENST00000553145 KCNK18Q7Z418 384 aa20.86■□□□□ 0.93
HDAC4-217ENST00000553145 MRPL38Q96DV4 380 aaKnown RBP20.86■□□□□ 0.93
HDAC4-217ENST00000553145 CASD1Q96PB1 797 aa20.86■□□□□ 0.93
HDAC4-217ENST00000553145 TRAIPQ9BWF2 469 aa20.86■□□□□ 0.93
HDAC4-217ENST00000553145 BHMT2Q9H2M3 363 aa20.86■□□□□ 0.93
HDAC4-217ENST00000553145 ATG2AQ2TAZ0 1938 aa20.86■□□□□ 0.93
HDAC4-217ENST00000553145 PRUNE2Q8WUY3 3088 aa20.85■□□□□ 0.93
HDAC4-217ENST00000553145 E9PMD0 336 aa20.85■□□□□ 0.93
HDAC4-217ENST00000553145 GRM6O15303 877 aa20.85■□□□□ 0.93
HDAC4-217ENST00000553145 CYP11B2P19099 503 aa20.85■□□□□ 0.93
HDAC4-217ENST00000553145 HOXA11P31270 313 aaPredicted RBP20.85■□□□□ 0.93
HDAC4-217ENST00000553145 MBTD1Q05BQ5 628 aa20.85■□□□□ 0.93
HDAC4-217ENST00000553145 POU5F1BQ06416 359 aa20.85■□□□□ 0.93
HDAC4-217ENST00000553145 ARL6IP4Q66PJ3 421 aaKnown RBP20.85■□□□□ 0.93
HDAC4-217ENST00000553145 LRRC55Q6ZSA7 311 aa20.85■□□□□ 0.93
HDAC4-217ENST00000553145 MCPH1Q8NEM0 835 aa20.85■□□□□ 0.93
HDAC4-217ENST00000553145 BSNDQ8WZ55 320 aa20.85■□□□□ 0.93
HDAC4-217ENST00000553145 C11orf84Q9BUA3 381 aaPredicted RBP20.85■□□□□ 0.93
HDAC4-217ENST00000553145 TMEM117Q9H0C3 514 aa20.85■□□□□ 0.93
HDAC4-217ENST00000553145 CWH43Q9H720 699 aa20.85■□□□□ 0.93
HDAC4-217ENST00000553145 TYW1Q9NV66 732 aaKnown RBP20.85■□□□□ 0.93
HDAC4-217ENST00000553145 MTMR6Q9Y217 621 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms