RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 CACNA1HO95180 2353 aa13.35□□□□□ -0.27
CKAP4-202ENST00000552828 CYP3A7-CYP3A51PA0A087WV96 503 aa13.34□□□□□ -0.27
CKAP4-202ENST00000552828 IGKV6-21A0A0C4DH24 114 aa13.34□□□□□ -0.27
CKAP4-202ENST00000552828 GAS7O60861 476 aa13.34□□□□□ -0.27
CKAP4-202ENST00000552828 PSMD10O75832 226 aa13.34□□□□□ -0.27
CKAP4-202ENST00000552828 STBD1O95210 358 aa13.34□□□□□ -0.27
CKAP4-202ENST00000552828 CYP3A7P24462 503 aa13.34□□□□□ -0.27
CKAP4-202ENST00000552828 NUBP1P53384 320 aa13.34□□□□□ -0.27
CKAP4-202ENST00000552828 AKAP17AQ02040 695 aaKnown RBP13.34□□□□□ -0.27
CKAP4-202ENST00000552828 ITIH3Q06033 890 aa13.34□□□□□ -0.27
CKAP4-202ENST00000552828 TBC1D8BQ0IIM8 1120 aa13.34□□□□□ -0.27
CKAP4-202ENST00000552828 SMC1AQ14683 1233 aaKnown RBP13.34□□□□□ -0.27
CKAP4-202ENST00000552828 Q4G0T1 1027 aa13.34□□□□□ -0.27
CKAP4-202ENST00000552828 TPRNQ4KMQ1 711 aa13.34□□□□□ -0.27
CKAP4-202ENST00000552828 LLGL2Q6P1M3 1020 aa13.34□□□□□ -0.27
CKAP4-202ENST00000552828 NECTIN4Q96NY8 510 aa13.34□□□□□ -0.27
CKAP4-202ENST00000552828 MRPL9Q9BYD2 267 aaKnown RBP13.34□□□□□ -0.27
CKAP4-202ENST00000552828 ADAM7Q9H2U9 754 aa13.34□□□□□ -0.27
CKAP4-202ENST00000552828 UNC45AQ9H3U1 944 aa13.34□□□□□ -0.27
CKAP4-202ENST00000552828 UPF2Q9HAU5 1272 aaKnown RBP13.34□□□□□ -0.27
CKAP4-202ENST00000552828 TSHZ2Q9NRE2 1034 aa13.34□□□□□ -0.27
CKAP4-202ENST00000552828 NR2E1Q9Y466 385 aa13.34□□□□□ -0.27
CKAP4-202ENST00000552828 HCFC2Q9Y5Z7 792 aa13.34□□□□□ -0.27
CKAP4-202ENST00000552828 ZFHX2Q9C0A1 2572 aaPredicted RBP13.34□□□□□ -0.27
CKAP4-202ENST00000552828 CARNS1A5YM72 827 aa13.33□□□□□ -0.28
CKAP4-202ENST00000552828 CLASP2O75122 1294 aaKnown RBP13.33□□□□□ -0.28
CKAP4-202ENST00000552828 ALDH7A1P49419 539 aaKnown RBP13.33□□□□□ -0.28
CKAP4-202ENST00000552828 DRP2Q13474 957 aa13.33□□□□□ -0.28
CKAP4-202ENST00000552828 TOB2Q14106 344 aaPredicted RBP13.33□□□□□ -0.28
CKAP4-202ENST00000552828 XKR3Q5GH77 459 aa13.33□□□□□ -0.28
CKAP4-202ENST00000552828 LRCH2Q5VUJ6 765 aa13.33□□□□□ -0.28
CKAP4-202ENST00000552828 RNF169Q8NCN4 708 aa13.33□□□□□ -0.28
CKAP4-202ENST00000552828 HELQQ8TDG4 1101 aa13.33□□□□□ -0.28
CKAP4-202ENST00000552828 NLRP7Q8WX94 980 aa13.33□□□□□ -0.28
CKAP4-202ENST00000552828 TEKT3Q9BXF9 490 aa13.33□□□□□ -0.28
CKAP4-202ENST00000552828 C22orf23Q9BZE7 217 aa13.33□□□□□ -0.28
CKAP4-202ENST00000552828 VPS54Q9P1Q0 977 aa13.33□□□□□ -0.28
CKAP4-202ENST00000552828 IRAK3Q9Y616 596 aa13.33□□□□□ -0.28
CKAP4-202ENST00000552828 EVPLQ92817 2033 aa13.33□□□□□ -0.28
CKAP4-202ENST00000552828 CHMP2AO43633 222 aa13.32□□□□□ -0.28
CKAP4-202ENST00000552828 FGFR4P22455 802 aa13.32□□□□□ -0.28
CKAP4-202ENST00000552828 PDIA3P30101 505 aaKnown RBP13.32□□□□□ -0.28
CKAP4-202ENST00000552828 AVPR2P30518 371 aa13.32□□□□□ -0.28
CKAP4-202ENST00000552828 PHKA2P46019 1235 aa13.32□□□□□ -0.28
CKAP4-202ENST00000552828 VCPP55072 806 aaKnown RBP13.32□□□□□ -0.28
CKAP4-202ENST00000552828 BCAR1P56945 870 aa13.32□□□□□ -0.28
CKAP4-202ENST00000552828 ANKRD1Q15327 319 aa13.32□□□□□ -0.28
CKAP4-202ENST00000552828 CES5AQ6NT32 575 aa13.32□□□□□ -0.28
CKAP4-202ENST00000552828 UBALD2Q8IYN6 164 aa13.32□□□□□ -0.28
CKAP4-202ENST00000552828 TBCKQ8TEA7 893 aa13.32□□□□□ -0.28
CKAP4-202ENST00000552828 ZNF668Q96K58 619 aaPredicted RBP13.32□□□□□ -0.28
CKAP4-202ENST00000552828 RIPOR3Q96MK2 946 aa13.32□□□□□ -0.28
CKAP4-202ENST00000552828 MBOAT7Q96N66 472 aa13.32□□□□□ -0.28
CKAP4-202ENST00000552828 APOL5Q9BWW9 433 aa13.32□□□□□ -0.28
CKAP4-202ENST00000552828 SLC26A6Q9BXS9 759 aa13.32□□□□□ -0.28
CKAP4-202ENST00000552828 GCOM2Q9BZD3 368 aaPredicted RBP13.32□□□□□ -0.28
CKAP4-202ENST00000552828 IRF2BPLQ9H1B7 796 aa13.32□□□□□ -0.28
CKAP4-202ENST00000552828 M0R2N6 131 aa13.31□□□□□ -0.28
CKAP4-202ENST00000552828 ZNF623O75123 536 aa13.31□□□□□ -0.28
CKAP4-202ENST00000552828 MAFO75444 373 aaPredicted RBP13.31□□□□□ -0.28
CKAP4-202ENST00000552828 CSDE1O75534 798 aaKnown RBP13.31□□□□□ -0.28
CKAP4-202ENST00000552828 CXCL14O95715 111 aa13.31□□□□□ -0.28
CKAP4-202ENST00000552828 SKIP12755 728 aa13.31□□□□□ -0.28
CKAP4-202ENST00000552828 DNM2P50570 870 aa13.31□□□□□ -0.28
CKAP4-202ENST00000552828 NEK4P51957 841 aa13.31□□□□□ -0.28
CKAP4-202ENST00000552828 POLGP54098 1239 aaPredicted RBP13.31□□□□□ -0.28
CKAP4-202ENST00000552828 BMS1Q14692 1282 aaKnown RBP13.31□□□□□ -0.28
CKAP4-202ENST00000552828 MOXD1Q6UVY6 613 aa13.31□□□□□ -0.28
CKAP4-202ENST00000552828 MIER3Q7Z3K6 550 aa13.31□□□□□ -0.28
CKAP4-202ENST00000552828 DDX53Q86TM3 631 aaKnown RBP13.31□□□□□ -0.28
CKAP4-202ENST00000552828 ZNF410Q86VK4 478 aa13.31□□□□□ -0.28
CKAP4-202ENST00000552828 FAM177A1Q8N128 213 aaPredicted RBP13.31□□□□□ -0.28
CKAP4-202ENST00000552828 KREMEN2Q8NCW0 462 aa13.31□□□□□ -0.28
CKAP4-202ENST00000552828 ETNPPLQ8TBG4 499 aa13.31□□□□□ -0.28
CKAP4-202ENST00000552828 GJA10Q969M2 543 aa13.31□□□□□ -0.28
CKAP4-202ENST00000552828 ZNF274Q96GC6 653 aaPredicted RBP13.31□□□□□ -0.28
CKAP4-202ENST00000552828 SCLT1Q96NL6 688 aa13.31□□□□□ -0.28
CKAP4-202ENST00000552828 ZBP1Q9H171 429 aa13.31□□□□□ -0.28
CKAP4-202ENST00000552828 POMKQ9H5K3 350 aa13.31□□□□□ -0.28
CKAP4-202ENST00000552828 DZANK1Q9NVP4 752 aa13.31□□□□□ -0.28
CKAP4-202ENST00000552828 CDH22Q9UJ99 828 aa13.31□□□□□ -0.28
CKAP4-202ENST00000552828 PCDHA4Q9UN74 947 aa13.31□□□□□ -0.28
CKAP4-202ENST00000552828 SORCS3Q9UPU3 1222 aa13.31□□□□□ -0.28
CKAP4-202ENST00000552828 A0A087WZ62 844 aa13.3□□□□□ -0.28
CKAP4-202ENST00000552828 C2CD4DB7Z1M9 353 aa13.3□□□□□ -0.28
CKAP4-202ENST00000552828 NT5C1B-RDH14C9J2C7 533 aa13.3□□□□□ -0.28
CKAP4-202ENST00000552828 SFPQP23246 707 aaKnown RBP eCLIP13.3□□□□□ -0.28
CKAP4-202ENST00000552828 MTHFRP42898 656 aa13.3□□□□□ -0.28
CKAP4-202ENST00000552828 RBM25P49756 843 aaKnown RBP13.3□□□□□ -0.28
CKAP4-202ENST00000552828 NLRP5P59047 1200 aa13.3□□□□□ -0.28
CKAP4-202ENST00000552828 MTMR3Q13615 1198 aa13.3□□□□□ -0.28
CKAP4-202ENST00000552828 GIT2Q14161 759 aa13.3□□□□□ -0.28
CKAP4-202ENST00000552828 TMEM173Q86WV6 379 aaPredicted RBP13.3□□□□□ -0.28
CKAP4-202ENST00000552828 VPS52Q8N1B4 723 aa13.3□□□□□ -0.28
CKAP4-202ENST00000552828 TMEM169Q96HH4 297 aa13.3□□□□□ -0.28
CKAP4-202ENST00000552828 IGSF21Q96ID5 467 aa13.3□□□□□ -0.28
CKAP4-202ENST00000552828 FDXACB1Q9BRP7 624 aaPredicted RBP13.3□□□□□ -0.28
CKAP4-202ENST00000552828 LARP6Q9BRS8 491 aaKnown RBP13.3□□□□□ -0.28
CKAP4-202ENST00000552828 INO80BQ9C086 356 aaPredicted RBP13.3□□□□□ -0.28
CKAP4-202ENST00000552828 NCOA5Q9HCD5 579 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms