RNA–Protein interactions for RNA: ENST00000552282.1

CALCOCO1-220, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-220ENST00000552282 SSRP1Q08945 709 aaKnown RBP18.13■□□□□ 0.49
CALCOCO1-220ENST00000552282 DRP2Q13474 957 aa18.13■□□□□ 0.49
CALCOCO1-220ENST00000552282 SYCE2Q6PIF2 218 aa18.13■□□□□ 0.49
CALCOCO1-220ENST00000552282 MIER3Q7Z3K6 550 aa18.13■□□□□ 0.49
CALCOCO1-220ENST00000552282 FBXL18Q96ME1 805 aa18.13■□□□□ 0.49
CALCOCO1-220ENST00000552282 JPH2Q9BR39 696 aaPredicted RBP18.13■□□□□ 0.49
CALCOCO1-220ENST00000552282 GCOM2Q9BZD3 368 aaPredicted RBP18.13■□□□□ 0.49
CALCOCO1-220ENST00000552282 INO80BQ9C086 356 aaPredicted RBP18.13■□□□□ 0.49
CALCOCO1-220ENST00000552282 KCNMB3Q9NPA1 279 aa18.13■□□□□ 0.49
CALCOCO1-220ENST00000552282 USP34Q70CQ2 3546 aa18.12■□□□□ 0.49
CALCOCO1-220ENST00000552282 CHMP2AO43633 222 aa18.12■□□□□ 0.49
CALCOCO1-220ENST00000552282 ZNF623O75123 536 aa18.12■□□□□ 0.49
CALCOCO1-220ENST00000552282 SKIP12755 728 aa18.12■□□□□ 0.49
CALCOCO1-220ENST00000552282 SFPQP23246 707 aaKnown RBP eCLIP18.12■□□□□ 0.49
CALCOCO1-220ENST00000552282 PHKA2P46019 1235 aa18.12■□□□□ 0.49
CALCOCO1-220ENST00000552282 RBM10P98175 930 aaKnown RBP18.12■□□□□ 0.49
CALCOCO1-220ENST00000552282 PPP2R5CQ13362 524 aa18.12■□□□□ 0.49
CALCOCO1-220ENST00000552282 PLPP4Q5VZY2 271 aa18.12■□□□□ 0.49
CALCOCO1-220ENST00000552282 PPP4R3AQ6IN85 833 aa18.12■□□□□ 0.49
CALCOCO1-220ENST00000552282 KRT25Q7Z3Z0 450 aa18.12■□□□□ 0.49
CALCOCO1-220ENST00000552282 MRPL43Q8N983 215 aaKnown RBP18.12■□□□□ 0.49
CALCOCO1-220ENST00000552282 NLRP7Q8WX94 980 aa18.12■□□□□ 0.49
CALCOCO1-220ENST00000552282 PRRX2Q99811 253 aa18.12■□□□□ 0.49
CALCOCO1-220ENST00000552282 CYP46A1Q9Y6A2 500 aa18.12■□□□□ 0.49
CALCOCO1-220ENST00000552282 STK36Q9NRP7 1315 aa18.12■□□□□ 0.49
CALCOCO1-220ENST00000552282 CACNA1HO95180 2353 aa18.12■□□□□ 0.49
CALCOCO1-220ENST00000552282 TMEM221A6NGB7 291 aa18.11■□□□□ 0.49
CALCOCO1-220ENST00000552282 HIDE1A8MVS5 230 aa18.11■□□□□ 0.49
CALCOCO1-220ENST00000552282 M0R296 226 aa18.11■□□□□ 0.49
CALCOCO1-220ENST00000552282 GCFC2P16383 781 aaKnown RBP18.11■□□□□ 0.49
CALCOCO1-220ENST00000552282 DNM2P50570 870 aa18.11■□□□□ 0.49
CALCOCO1-220ENST00000552282 RAB27AP51159 221 aa18.11■□□□□ 0.49
CALCOCO1-220ENST00000552282 POLGP54098 1239 aaPredicted RBP18.11■□□□□ 0.49
CALCOCO1-220ENST00000552282 PSMC5P62195 406 aa18.11■□□□□ 0.49
CALCOCO1-220ENST00000552282 SIGLEC14Q08ET2 396 aa18.11■□□□□ 0.49
CALCOCO1-220ENST00000552282 SMC1AQ14683 1233 aaKnown RBP18.11■□□□□ 0.49
CALCOCO1-220ENST00000552282 NONOQ15233 471 aaKnown RBP eCLIP18.11■□□□□ 0.49
CALCOCO1-220ENST00000552282 CPLX2Q6PUV4 134 aaKnown RBP18.11■□□□□ 0.49
CALCOCO1-220ENST00000552282 ANO5Q75V66 913 aa18.11■□□□□ 0.49
CALCOCO1-220ENST00000552282 TRMT1LQ7Z2T5 733 aaKnown RBP18.11■□□□□ 0.49
CALCOCO1-220ENST00000552282 CASP10Q92851 521 aa18.11■□□□□ 0.49
CALCOCO1-220ENST00000552282 FAM20AQ96MK3 541 aa18.11■□□□□ 0.49
CALCOCO1-220ENST00000552282 ENTPD7Q9NQZ7 604 aa18.11■□□□□ 0.49
CALCOCO1-220ENST00000552282 SEPT9Q9UHD8 586 aaPredicted RBP18.11■□□□□ 0.49
CALCOCO1-220ENST00000552282 VAV3Q9UKW4 847 aa18.11■□□□□ 0.49
CALCOCO1-220ENST00000552282 ARID2Q68CP9 1835 aa18.11■□□□□ 0.49
CALCOCO1-220ENST00000552282 DENND4AQ7Z401 1863 aa18.11■□□□□ 0.49
CALCOCO1-220ENST00000552282 C2orf71A6NGG8 1288 aa18.1■□□□□ 0.49
CALCOCO1-220ENST00000552282 CPLX1O14810 134 aa18.1■□□□□ 0.49
CALCOCO1-220ENST00000552282 TBX3O15119 743 aa18.1■□□□□ 0.49
CALCOCO1-220ENST00000552282 DKC1O60832 514 aaKnown RBP eCLIP18.1■□□□□ 0.49
CALCOCO1-220ENST00000552282 IBSPP21815 317 aaPredicted RBP18.1■□□□□ 0.49
CALCOCO1-220ENST00000552282 ITIH3Q06033 890 aa18.1■□□□□ 0.49
CALCOCO1-220ENST00000552282 PTPN21Q16825 1174 aa18.1■□□□□ 0.49
CALCOCO1-220ENST00000552282 MTERF2Q49AM1 385 aa18.1■□□□□ 0.49
CALCOCO1-220ENST00000552282 HELQQ8TDG4 1101 aa18.1■□□□□ 0.49
CALCOCO1-220ENST00000552282 GJA10Q969M2 543 aa18.1■□□□□ 0.49
CALCOCO1-220ENST00000552282 ASIC4Q96FT7 647 aa18.1■□□□□ 0.49
CALCOCO1-220ENST00000552282 NECTIN4Q96NY8 510 aa18.1■□□□□ 0.49
CALCOCO1-220ENST00000552282 PHF20Q9BVI0 1012 aa18.1■□□□□ 0.49
CALCOCO1-220ENST00000552282 ZBP1Q9H171 429 aa18.1■□□□□ 0.49
CALCOCO1-220ENST00000552282 STK39Q9UEW8 545 aa18.1■□□□□ 0.49
CALCOCO1-220ENST00000552282 DDX25Q9UHL0 483 aaKnown RBP18.1■□□□□ 0.49
CALCOCO1-220ENST00000552282 HCFC2Q9Y5Z7 792 aa18.1■□□□□ 0.49
CALCOCO1-220ENST00000552282 A0A087WZ62 844 aa18.09■□□□□ 0.49
CALCOCO1-220ENST00000552282 PBX3P40426 434 aa18.09■□□□□ 0.49
CALCOCO1-220ENST00000552282 TECP42680 631 aa18.09■□□□□ 0.49
CALCOCO1-220ENST00000552282 BCAR1P56945 870 aa18.09■□□□□ 0.49
CALCOCO1-220ENST00000552282 GIT2Q14161 759 aa18.09■□□□□ 0.49
CALCOCO1-220ENST00000552282 TPRNQ4KMQ1 711 aa18.09■□□□□ 0.49
CALCOCO1-220ENST00000552282 TMC7Q7Z402 723 aa18.09■□□□□ 0.49
CALCOCO1-220ENST00000552282 EXOC8Q8IYI6 725 aa18.09■□□□□ 0.49
CALCOCO1-220ENST00000552282 SCLT1Q96NL6 688 aa18.09■□□□□ 0.49
CALCOCO1-220ENST00000552282 FDXACB1Q9BRP7 624 aaPredicted RBP18.09■□□□□ 0.49
CALCOCO1-220ENST00000552282 DHX33Q9H6R0 707 aaKnown RBP18.09■□□□□ 0.49
CALCOCO1-220ENST00000552282 IFT122Q9HBG6 1241 aa18.09■□□□□ 0.49
CALCOCO1-220ENST00000552282 SLC37A4O43826 429 aa18.08■□□□□ 0.48
CALCOCO1-220ENST00000552282 GAS2O43903 313 aaKnown RBP18.08■□□□□ 0.48
CALCOCO1-220ENST00000552282 FGFR4P22455 802 aa18.08■□□□□ 0.48
CALCOCO1-220ENST00000552282 QARSP47897 775 aaKnown RBP18.08■□□□□ 0.48
CALCOCO1-220ENST00000552282 ALDH7A1P49419 539 aaKnown RBP18.08■□□□□ 0.48
CALCOCO1-220ENST00000552282 FBXL6Q8N531 539 aa18.08■□□□□ 0.48
CALCOCO1-220ENST00000552282 ZNF668Q96K58 619 aaPredicted RBP18.08■□□□□ 0.48
CALCOCO1-220ENST00000552282 NAP1L4Q99733 375 aaKnown RBP18.08■□□□□ 0.48
CALCOCO1-220ENST00000552282 ADAM7Q9H2U9 754 aa18.08■□□□□ 0.48
CALCOCO1-220ENST00000552282 CYP26B1Q9NR63 512 aa18.08■□□□□ 0.48
CALCOCO1-220ENST00000552282 AGPAT5Q9NUQ2 364 aa18.08■□□□□ 0.48
CALCOCO1-220ENST00000552282 FAM105AQ9NUU6 356 aa18.08■□□□□ 0.48
CALCOCO1-220ENST00000552282 DZANK1Q9NVP4 752 aa18.08■□□□□ 0.48
CALCOCO1-220ENST00000552282 SUCLA2Q9P2R7 463 aaPredicted RBP18.08■□□□□ 0.48
CALCOCO1-220ENST00000552282 TMEM150BA6NC51 233 aa18.07■□□□□ 0.48
CALCOCO1-220ENST00000552282 EML1O00423 815 aa18.07■□□□□ 0.48
CALCOCO1-220ENST00000552282 CLASP2O75122 1294 aaKnown RBP18.07■□□□□ 0.48
CALCOCO1-220ENST00000552282 CDKL5O76039 1030 aa18.07■□□□□ 0.48
CALCOCO1-220ENST00000552282 CTSAP10619 480 aa18.07■□□□□ 0.48
CALCOCO1-220ENST00000552282 MRE11P49959 708 aa18.07■□□□□ 0.48
CALCOCO1-220ENST00000552282 INF2Q27J81 1249 aa18.07■□□□□ 0.48
CALCOCO1-220ENST00000552282 MRPL10Q7Z7H8 261 aaKnown RBP18.07■□□□□ 0.48
CALCOCO1-220ENST00000552282 NEK8Q86SG6 692 aa18.07■□□□□ 0.48
CALCOCO1-220ENST00000552282 DDX53Q86TM3 631 aaKnown RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms