RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 ADGRD2Q7Z7M1 963 aa14.58□□□□□ -0.08
NPAS3-209ENST00000551008 ZNF410Q86VK4 478 aa14.58□□□□□ -0.08
NPAS3-209ENST00000551008 RHPN2Q8IUC4 686 aa14.58□□□□□ -0.08
NPAS3-209ENST00000551008 NEK9Q8TD19 979 aa14.58□□□□□ -0.08
NPAS3-209ENST00000551008 TMEM143Q96AN5 459 aa14.58□□□□□ -0.08
NPAS3-209ENST00000551008 C8orf76Q96K31 380 aa14.58□□□□□ -0.08
NPAS3-209ENST00000551008 CEP170P1Q96L14 293 aa14.58□□□□□ -0.08
NPAS3-209ENST00000551008 ZSCAN31Q96LW9 406 aaPredicted RBP14.58□□□□□ -0.08
NPAS3-209ENST00000551008 SH2B1Q9NRF2 756 aaPredicted RBP14.58□□□□□ -0.08
NPAS3-209ENST00000551008 TYW1Q9NV66 732 aaKnown RBP14.58□□□□□ -0.08
NPAS3-209ENST00000551008 PCDHA12Q9UN75 941 aa14.58□□□□□ -0.08
NPAS3-209ENST00000551008 A0A0U1RQF3 1178 aa14.57□□□□□ -0.08
NPAS3-209ENST00000551008 MEIS3P2A8K0S8 358 aa14.57□□□□□ -0.08
NPAS3-209ENST00000551008 TNFRSF10AO00220 468 aa14.57□□□□□ -0.08
NPAS3-209ENST00000551008 KCNA5P22460 613 aa14.57□□□□□ -0.08
NPAS3-209ENST00000551008 MCM7P33993 719 aa14.57□□□□□ -0.08
NPAS3-209ENST00000551008 TXKP42681 527 aa14.57□□□□□ -0.08
NPAS3-209ENST00000551008 DLX2Q07687 328 aaPredicted RBP14.57□□□□□ -0.08
NPAS3-209ENST00000551008 TRIM29Q14134 588 aa14.57□□□□□ -0.08
NPAS3-209ENST00000551008 NBR1Q14596 966 aa14.57□□□□□ -0.08
NPAS3-209ENST00000551008 EMC2Q15006 297 aa14.57□□□□□ -0.08
NPAS3-209ENST00000551008 LEXMQ3ZCV2 418 aa14.57□□□□□ -0.08
NPAS3-209ENST00000551008 C4orf32Q8N8J7 132 aa14.57□□□□□ -0.08
NPAS3-209ENST00000551008 COLGALT1Q8NBJ5 622 aa14.57□□□□□ -0.08
NPAS3-209ENST00000551008 PRPF31Q8WWY3 499 aaKnown RBP14.57□□□□□ -0.08
NPAS3-209ENST00000551008 PABPC5Q96DU9 382 aaKnown RBP14.57□□□□□ -0.08
NPAS3-209ENST00000551008 NLRP4Q96MN2 994 aa14.57□□□□□ -0.08
NPAS3-209ENST00000551008 SCLT1Q96NL6 688 aa14.57□□□□□ -0.08
NPAS3-209ENST00000551008 GCOM2Q9BZD3 368 aaPredicted RBP14.57□□□□□ -0.08
NPAS3-209ENST00000551008 TMEM117Q9H0C3 514 aa14.57□□□□□ -0.08
NPAS3-209ENST00000551008 ZSWIM4Q9H7M6 989 aa14.57□□□□□ -0.08
NPAS3-209ENST00000551008 ATP6V0A4Q9HBG4 840 aa14.57□□□□□ -0.08
NPAS3-209ENST00000551008 CD320Q9NPF0 282 aa14.57□□□□□ -0.08
NPAS3-209ENST00000551008 COL4A3BPQ9Y5P4 624 aa14.57□□□□□ -0.08
NPAS3-209ENST00000551008 LINC01565O15544 149 aa14.56□□□□□ -0.08
NPAS3-209ENST00000551008 TBX10O75333 385 aa14.56□□□□□ -0.08
NPAS3-209ENST00000551008 BAG4O95429 457 aaKnown RBP14.56□□□□□ -0.08
NPAS3-209ENST00000551008 ATP2B1P20020 1258 aa14.56□□□□□ -0.08
NPAS3-209ENST00000551008 RFC5P40937 340 aa14.56□□□□□ -0.08
NPAS3-209ENST00000551008 TOB1P50616 345 aaPredicted RBP14.56□□□□□ -0.08
NPAS3-209ENST00000551008 POLGP54098 1239 aaPredicted RBP14.56□□□□□ -0.08
NPAS3-209ENST00000551008 HMGN5P82970 282 aaKnown RBP14.56□□□□□ -0.08
NPAS3-209ENST00000551008 RABEP1Q15276 862 aa14.56□□□□□ -0.08
NPAS3-209ENST00000551008 AAK1Q2M2I8 961 aa14.56□□□□□ -0.08
NPAS3-209ENST00000551008 NAALADL2Q58DX5 795 aa14.56□□□□□ -0.08
NPAS3-209ENST00000551008 XKR9Q5GH70 373 aa14.56□□□□□ -0.08
NPAS3-209ENST00000551008 TPH2Q8IWU9 490 aa14.56□□□□□ -0.08
NPAS3-209ENST00000551008 POF1BQ8WVV4 589 aa14.56□□□□□ -0.08
NPAS3-209ENST00000551008 KHSRPQ92945 711 aaKnown RBP eCLIP14.56□□□□□ -0.08
NPAS3-209ENST00000551008 TRAIPQ9BWF2 469 aa14.56□□□□□ -0.08
NPAS3-209ENST00000551008 FOXP1Q9H334 677 aaPredicted RBP14.56□□□□□ -0.08
NPAS3-209ENST00000551008 PPME1Q9Y570 386 aa14.56□□□□□ -0.08
NPAS3-209ENST00000551008 TDRD15B5MCY1 1934 aaKnown RBP14.55□□□□□ -0.08
NPAS3-209ENST00000551008 H3BQ06 376 aaPredicted RBP14.55□□□□□ -0.08
NPAS3-209ENST00000551008 MARCH6O60337 910 aa14.55□□□□□ -0.08
NPAS3-209ENST00000551008 B4GALT3O60512 393 aa14.55□□□□□ -0.08
NPAS3-209ENST00000551008 DKC1O60832 514 aaKnown RBP eCLIP14.55□□□□□ -0.08
NPAS3-209ENST00000551008 MED24O75448 989 aa14.55□□□□□ -0.08
NPAS3-209ENST00000551008 IL9P15248 144 aa14.55□□□□□ -0.08
NPAS3-209ENST00000551008 HOXA11P31270 313 aaPredicted RBP14.55□□□□□ -0.08
NPAS3-209ENST00000551008 PBX3P40426 434 aa14.55□□□□□ -0.08
NPAS3-209ENST00000551008 PHKA2P46019 1235 aa14.55□□□□□ -0.08
NPAS3-209ENST00000551008 RARRES1P49788 294 aa14.55□□□□□ -0.08
NPAS3-209ENST00000551008 DNM2P50570 870 aa14.55□□□□□ -0.08
NPAS3-209ENST00000551008 LAMTOR4Q0VGL1 99 aa14.55□□□□□ -0.08
NPAS3-209ENST00000551008 ZNF174Q15697 407 aa14.55□□□□□ -0.08
NPAS3-209ENST00000551008 UBXN11Q5T124 520 aa14.55□□□□□ -0.08
NPAS3-209ENST00000551008 FERMT3Q86UX7 667 aa14.55□□□□□ -0.08
NPAS3-209ENST00000551008 ASAP3Q8TDY4 903 aa14.55□□□□□ -0.08
NPAS3-209ENST00000551008 PIGOQ8TEQ8 1089 aa14.55□□□□□ -0.08
NPAS3-209ENST00000551008 SLC7A3Q8WY07 619 aa14.55□□□□□ -0.08
NPAS3-209ENST00000551008 LPPQ93052 612 aa14.55□□□□□ -0.08
NPAS3-209ENST00000551008 AGPAT5Q9NUQ2 364 aa14.55□□□□□ -0.08
NPAS3-209ENST00000551008 FGF18O76093 207 aa14.54□□□□□ -0.08
NPAS3-209ENST00000551008 GLP2RO95838 553 aa14.54□□□□□ -0.08
NPAS3-209ENST00000551008 ZSCAN20P17040 1043 aaPredicted RBP14.54□□□□□ -0.08
NPAS3-209ENST00000551008 U2AF2P26368 475 aaKnown RBP eCLIP14.54□□□□□ -0.08
NPAS3-209ENST00000551008 ERVFC1P60507 584 aa14.54□□□□□ -0.08
NPAS3-209ENST00000551008 CDC42EP1Q00587 391 aa14.54□□□□□ -0.08
NPAS3-209ENST00000551008 CATSPER3Q86XQ3 398 aa14.54□□□□□ -0.08
NPAS3-209ENST00000551008 NOSTRINQ8IVI9 506 aa14.54□□□□□ -0.08
NPAS3-209ENST00000551008 HELQQ8TDG4 1101 aa14.54□□□□□ -0.08
NPAS3-209ENST00000551008 PSPC1Q8WXF1 523 aaKnown RBP14.54□□□□□ -0.08
NPAS3-209ENST00000551008 TMX3Q96JJ7 454 aa14.54□□□□□ -0.08
NPAS3-209ENST00000551008 TBC1D32Q96NH3 1257 aa14.54□□□□□ -0.08
NPAS3-209ENST00000551008 JPH2Q9BR39 696 aaPredicted RBP14.54□□□□□ -0.08
NPAS3-209ENST00000551008 CHST12Q9NRB3 414 aa14.54□□□□□ -0.08
NPAS3-209ENST00000551008 ANKEF1Q9NU02 776 aa14.54□□□□□ -0.08
NPAS3-209ENST00000551008 PIN4Q9Y237 131 aaKnown RBP14.54□□□□□ -0.08
NPAS3-209ENST00000551008 GRXCR2A6NFK2 248 aa14.53□□□□□ -0.08
NPAS3-209ENST00000551008 FSCN2O14926 492 aa14.53□□□□□ -0.08
NPAS3-209ENST00000551008 EOMESO95936 686 aa14.53□□□□□ -0.08
NPAS3-209ENST00000551008 OR52Z1P0C646 297 aa14.53□□□□□ -0.08
NPAS3-209ENST00000551008 SRGAP2CP0DJJ0 459 aa14.53□□□□□ -0.08
NPAS3-209ENST00000551008 SFPQP23246 707 aaKnown RBP eCLIP14.53□□□□□ -0.08
NPAS3-209ENST00000551008 ARL2P36404 184 aa14.53□□□□□ -0.08
NPAS3-209ENST00000551008 RBM10P98175 930 aaKnown RBP14.53□□□□□ -0.08
NPAS3-209ENST00000551008 CAPSQ13938 189 aa14.53□□□□□ -0.08
NPAS3-209ENST00000551008 SAFBQ15424 915 aaKnown RBP eCLIP14.53□□□□□ -0.08
NPAS3-209ENST00000551008 ECM1Q16610 540 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms