RNA–Protein interactions for RNA: ENST00000550069.1

PFDN5-209, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-209ENST00000550069 DUOX1Q9NRD9 1551 aa6.61□□□□□ -1.35
PFDN5-209ENST00000550069 ZC3H12DA2A288 527 aaKnown RBP6.61□□□□□ -1.35
PFDN5-209ENST00000550069 PDPK1O15530 556 aa6.61□□□□□ -1.35
PFDN5-209ENST00000550069 MSCO60682 206 aa6.61□□□□□ -1.35
PFDN5-209ENST00000550069 GNAI2P04899 355 aa6.61□□□□□ -1.35
PFDN5-209ENST00000550069 GLI4P10075 376 aa6.61□□□□□ -1.35
PFDN5-209ENST00000550069 TRIM27P14373 513 aa6.61□□□□□ -1.35
PFDN5-209ENST00000550069 FPR2P25090 351 aa6.61□□□□□ -1.35
PFDN5-209ENST00000550069 HOXC12P31275 282 aa6.61□□□□□ -1.35
PFDN5-209ENST00000550069 NCKAP1LP55160 1127 aa6.61□□□□□ -1.35
PFDN5-209ENST00000550069 NTRK3Q16288 839 aa6.61□□□□□ -1.35
PFDN5-209ENST00000550069 PNMA8AQ86V59 439 aaPredicted RBP6.61□□□□□ -1.35
PFDN5-209ENST00000550069 RPAP2Q8IXW5 612 aaPredicted RBP6.61□□□□□ -1.35
PFDN5-209ENST00000550069 PPIL6Q8IXY8 311 aa6.61□□□□□ -1.35
PFDN5-209ENST00000550069 NIM1KQ8IY84 436 aa6.61□□□□□ -1.35
PFDN5-209ENST00000550069 SYNE4Q8N205 404 aa6.61□□□□□ -1.35
PFDN5-209ENST00000550069 DPF2Q92785 391 aa6.61□□□□□ -1.35
PFDN5-209ENST00000550069 MMP19Q99542 508 aa6.61□□□□□ -1.35
PFDN5-209ENST00000550069 COA1Q9GZY4 146 aa6.61□□□□□ -1.35
PFDN5-209ENST00000550069 EPN3Q9H201 632 aa6.61□□□□□ -1.35
PFDN5-209ENST00000550069 A0A1B0GUL6 1792 aa6.61□□□□□ -1.35
PFDN5-209ENST00000550069 TAF1P21675 1872 aa6.6□□□□□ -1.35
PFDN5-209ENST00000550069 A0A1W2PQ27 194 aa6.6□□□□□ -1.35
PFDN5-209ENST00000550069 A0A1W2PQ64 194 aa6.6□□□□□ -1.35
PFDN5-209ENST00000550069 A0A1W2PQC6 194 aa6.6□□□□□ -1.35
PFDN5-209ENST00000550069 A0A1W2PQD8 194 aa6.6□□□□□ -1.35
PFDN5-209ENST00000550069 PRODHO43272 600 aa6.6□□□□□ -1.35
PFDN5-209ENST00000550069 HMMRO75330 724 aa6.6□□□□□ -1.35
PFDN5-209ENST00000550069 FUCA1P04066 466 aa6.6□□□□□ -1.35
PFDN5-209ENST00000550069 VEGFAP15692 232 aaPredicted RBP6.6□□□□□ -1.35
PFDN5-209ENST00000550069 CDR1P51861 262 aa6.6□□□□□ -1.35
PFDN5-209ENST00000550069 SRSF3P84103 164 aaKnown RBP6.6□□□□□ -1.35
PFDN5-209ENST00000550069 FOXO4P98177 505 aa6.6□□□□□ -1.35
PFDN5-209ENST00000550069 FSTL1Q12841 308 aa6.6□□□□□ -1.35
PFDN5-209ENST00000550069 LDHAL6AQ6ZMR3 332 aa6.6□□□□□ -1.35
PFDN5-209ENST00000550069 TMC6Q7Z403 805 aa6.6□□□□□ -1.35
PFDN5-209ENST00000550069 RCBTB1Q8NDN9 531 aa6.6□□□□□ -1.35
PFDN5-209ENST00000550069 ST13P5Q8NFI4 369 aaPredicted RBP6.6□□□□□ -1.35
PFDN5-209ENST00000550069 PLEKHO2Q8TD55 490 aa6.6□□□□□ -1.35
PFDN5-209ENST00000550069 PDCL3Q9H2J4 239 aa6.6□□□□□ -1.35
PFDN5-209ENST00000550069 MARCH2Q9P0N8 246 aa6.6□□□□□ -1.35
PFDN5-209ENST00000550069 RNF181Q9P0P0 153 aa6.6□□□□□ -1.35
PFDN5-209ENST00000550069 MYH13Q9UKX3 1938 aa6.6□□□□□ -1.35
PFDN5-209ENST00000550069 PDS5AQ29RF7 1337 aaKnown RBP6.59□□□□□ -1.35
PFDN5-209ENST00000550069 PPIP5K2O43314 1243 aa6.59□□□□□ -1.35
PFDN5-209ENST00000550069 NBPF7P0C2Y1 421 aaPredicted RBP6.59□□□□□ -1.35
PFDN5-209ENST00000550069 IL15P40933 162 aaPredicted RBP6.59□□□□□ -1.35
PFDN5-209ENST00000550069 BCL6P41182 706 aa6.59□□□□□ -1.35
PFDN5-209ENST00000550069 CORO7P57737 925 aa6.59□□□□□ -1.35
PFDN5-209ENST00000550069 DLG4P78352 724 aa6.59□□□□□ -1.35
PFDN5-209ENST00000550069 RASGRF1Q13972 1273 aa6.59□□□□□ -1.35
PFDN5-209ENST00000550069 LMBR1LQ6UX01 489 aa6.59□□□□□ -1.35
PFDN5-209ENST00000550069 ATG14Q6ZNE5 492 aa6.59□□□□□ -1.35
PFDN5-209ENST00000550069 ERC1Q8IUD2 1116 aa6.59□□□□□ -1.35
PFDN5-209ENST00000550069 LZTR1Q8N653 840 aa6.59□□□□□ -1.35
PFDN5-209ENST00000550069 AGBL3Q8NEM8 1001 aa6.59□□□□□ -1.35
PFDN5-209ENST00000550069 CELF1Q92879 486 aaKnown RBP6.59□□□□□ -1.35
PFDN5-209ENST00000550069 ARMC5Q96C12 935 aa6.59□□□□□ -1.35
PFDN5-209ENST00000550069 DEPDC7Q96QD5 511 aa6.59□□□□□ -1.35
PFDN5-209ENST00000550069 MAP7D2Q96T17 732 aa6.59□□□□□ -1.35
PFDN5-209ENST00000550069 AARSD1Q9BTE6 412 aaKnown RBP6.59□□□□□ -1.35
PFDN5-209ENST00000550069 MRIQ9BWK5 157 aa6.59□□□□□ -1.35
PFDN5-209ENST00000550069 GREM2Q9H772 168 aa6.59□□□□□ -1.35
PFDN5-209ENST00000550069 CD320Q9NPF0 282 aa6.59□□□□□ -1.35
PFDN5-209ENST00000550069 GPR108Q9NPR9 543 aa6.59□□□□□ -1.35
PFDN5-209ENST00000550069 PPARGC1AQ9UBK2 798 aaKnown RBP6.59□□□□□ -1.35
PFDN5-209ENST00000550069 SPEF2Q9C093 1822 aa6.59□□□□□ -1.35
PFDN5-209ENST00000550069 SRCAPQ6ZRS2 3230 aa6.58□□□□□ -1.36
PFDN5-209ENST00000550069 ZNF804BA4D1E1 1349 aa6.58□□□□□ -1.36
PFDN5-209ENST00000550069 TEX51A0A1B0GUA7 166 aa6.58□□□□□ -1.36
PFDN5-209ENST00000550069 EYA2O00167 538 aa6.58□□□□□ -1.36
PFDN5-209ENST00000550069 MEFVO15553 781 aaPredicted RBP6.58□□□□□ -1.36
PFDN5-209ENST00000550069 SRGAP3O43295 1099 aa6.58□□□□□ -1.36
PFDN5-209ENST00000550069 PEX10O60683 326 aa6.58□□□□□ -1.36
PFDN5-209ENST00000550069 TOMM70O94826 608 aa6.58□□□□□ -1.36
PFDN5-209ENST00000550069 PDE8BO95263 885 aa6.58□□□□□ -1.36
PFDN5-209ENST00000550069 TSPAN15O95858 294 aa6.58□□□□□ -1.36
PFDN5-209ENST00000550069 NTRK1P04629 796 aa6.58□□□□□ -1.36
PFDN5-209ENST00000550069 MPOP05164 745 aa6.58□□□□□ -1.36
PFDN5-209ENST00000550069 IFIT1P09914 478 aaKnown RBP6.58□□□□□ -1.36
PFDN5-209ENST00000550069 FAM153BP0C7A2 387 aa6.58□□□□□ -1.36
PFDN5-209ENST00000550069 ARL4AP40617 200 aa6.58□□□□□ -1.36
PFDN5-209ENST00000550069 ZNF200P98182 395 aaPredicted RBP6.58□□□□□ -1.36
PFDN5-209ENST00000550069 SSRP1Q08945 709 aaKnown RBP6.58□□□□□ -1.36
PFDN5-209ENST00000550069 SSPNQ14714 243 aa6.58□□□□□ -1.36
PFDN5-209ENST00000550069 MVPQ14764 893 aaKnown RBP6.58□□□□□ -1.36
PFDN5-209ENST00000550069 CBX2Q14781 532 aaPredicted RBP6.58□□□□□ -1.36
PFDN5-209ENST00000550069 MTERF2Q49AM1 385 aa6.58□□□□□ -1.36
PFDN5-209ENST00000550069 CAVIN4Q5BKX8 364 aa6.58□□□□□ -1.36
PFDN5-209ENST00000550069 STRIP1Q5VSL9 837 aa6.58□□□□□ -1.36
PFDN5-209ENST00000550069 KCNT2Q6UVM3 1135 aa6.58□□□□□ -1.36
PFDN5-209ENST00000550069 USP50Q70EL3 339 aaPredicted RBP6.58□□□□□ -1.36
PFDN5-209ENST00000550069 ZNF804AQ7Z570 1209 aa6.58□□□□□ -1.36
PFDN5-209ENST00000550069 TICAM2Q86XR7 235 aa6.58□□□□□ -1.36
PFDN5-209ENST00000550069 ZGPATQ8N5A5 531 aaKnown RBP6.58□□□□□ -1.36
PFDN5-209ENST00000550069 TBC1D16Q8TBP0 767 aa6.58□□□□□ -1.36
PFDN5-209ENST00000550069 TBC1D22AQ8WUA7 517 aa6.58□□□□□ -1.36
PFDN5-209ENST00000550069 DIO2Q92813 273 aa6.58□□□□□ -1.36
PFDN5-209ENST00000550069 FRAT1Q92837 279 aaPredicted RBP6.58□□□□□ -1.36
PFDN5-209ENST00000550069 KCNN1Q92952 543 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms