RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 ZNF185O15231 689 aa9.72□□□□□ -0.85
TMEM116-209ENST00000550020 MYCLP12524 364 aaPredicted RBP9.72□□□□□ -0.85
TMEM116-209ENST00000550020 ACTN1P12814 892 aa9.72□□□□□ -0.85
TMEM116-209ENST00000550020 TAL1P17542 331 aaPredicted RBP9.72□□□□□ -0.85
TMEM116-209ENST00000550020 EIF2AK2P19525 551 aaKnown RBP9.72□□□□□ -0.85
TMEM116-209ENST00000550020 GTF2H1P32780 548 aa9.72□□□□□ -0.85
TMEM116-209ENST00000550020 CYP2C19P33261 490 aa9.72□□□□□ -0.85
TMEM116-209ENST00000550020 GMPSP49915 693 aaPredicted RBP9.72□□□□□ -0.85
TMEM116-209ENST00000550020 NCKAP1LP55160 1127 aa9.72□□□□□ -0.85
TMEM116-209ENST00000550020 RTP1P59025 263 aa9.72□□□□□ -0.85
TMEM116-209ENST00000550020 DMP1Q13316 513 aaPredicted RBP9.72□□□□□ -0.85
TMEM116-209ENST00000550020 COG2Q14746 738 aa9.72□□□□□ -0.85
TMEM116-209ENST00000550020 KIF22Q14807 665 aa9.72□□□□□ -0.85
TMEM116-209ENST00000550020 ENOX2Q16206 610 aaKnown RBP9.72□□□□□ -0.85
TMEM116-209ENST00000550020 SUPT20HL1Q3ZLR7 823 aa9.72□□□□□ -0.85
TMEM116-209ENST00000550020 XKR9Q5GH70 373 aa9.72□□□□□ -0.85
TMEM116-209ENST00000550020 ALS2CLQ60I27 953 aa9.72□□□□□ -0.85
TMEM116-209ENST00000550020 DPY19L2P1Q6NXN4 242 aa9.72□□□□□ -0.85
TMEM116-209ENST00000550020 POTEAQ6S8J7 498 aa9.72□□□□□ -0.85
TMEM116-209ENST00000550020 NSMFQ6X4W1 530 aa9.72□□□□□ -0.85
TMEM116-209ENST00000550020 PEX26Q7Z412 305 aa9.72□□□□□ -0.85
TMEM116-209ENST00000550020 HAUS6Q7Z4H7 955 aa9.72□□□□□ -0.85
TMEM116-209ENST00000550020 RHOT2Q8IXI1 618 aa9.72□□□□□ -0.85
TMEM116-209ENST00000550020 RBM46Q8TBY0 533 aaKnown RBP9.72□□□□□ -0.85
TMEM116-209ENST00000550020 ACTRT1Q8TDG2 376 aa9.72□□□□□ -0.85
TMEM116-209ENST00000550020 SPIRE2Q8WWL2 714 aa9.72□□□□□ -0.85
TMEM116-209ENST00000550020 TAAR1Q96RJ0 339 aa9.72□□□□□ -0.85
TMEM116-209ENST00000550020 RUFY1Q96T51 708 aa9.72□□□□□ -0.85
TMEM116-209ENST00000550020 MOV10L1Q9BXT6 1211 aaKnown RBP9.72□□□□□ -0.85
TMEM116-209ENST00000550020 ZMYND15Q9H091 742 aa9.72□□□□□ -0.85
TMEM116-209ENST00000550020 KIAA1586Q9HCI6 787 aa9.72□□□□□ -0.85
TMEM116-209ENST00000550020 PDE11AQ9HCR9 933 aa9.72□□□□□ -0.85
TMEM116-209ENST00000550020 HOXC10Q9NYD6 342 aa9.72□□□□□ -0.85
TMEM116-209ENST00000550020 COL20A1Q9P218 1284 aa9.72□□□□□ -0.85
TMEM116-209ENST00000550020 CNOT7Q9UIV1 285 aaKnown RBP9.72□□□□□ -0.85
TMEM116-209ENST00000550020 HACL1Q9UJ83 578 aa9.72□□□□□ -0.85
TMEM116-209ENST00000550020 USP20Q9Y2K6 914 aa9.72□□□□□ -0.85
TMEM116-209ENST00000550020 PFASO15067 1338 aa9.72□□□□□ -0.85
TMEM116-209ENST00000550020 NFASCO94856 1347 aa9.72□□□□□ -0.85
TMEM116-209ENST00000550020 COL4A5P29400 1685 aa9.71□□□□□ -0.85
TMEM116-209ENST00000550020 TESPA1A2RU30 521 aaPredicted RBP9.71□□□□□ -0.86
TMEM116-209ENST00000550020 PGRMC1O00264 195 aaKnown RBP9.71□□□□□ -0.86
TMEM116-209ENST00000550020 PDE2AO00408 941 aaPredicted RBP9.71□□□□□ -0.86
TMEM116-209ENST00000550020 EVI5O60447 810 aa9.71□□□□□ -0.86
TMEM116-209ENST00000550020 KIF4AO95239 1232 aa9.71□□□□□ -0.86
TMEM116-209ENST00000550020 DSG3P32926 999 aa9.71□□□□□ -0.86
TMEM116-209ENST00000550020 MFAP3P55082 362 aa9.71□□□□□ -0.86
TMEM116-209ENST00000550020 MCCD1P59942 119 aaPredicted RBP9.71□□□□□ -0.86
TMEM116-209ENST00000550020 MRPS9P82933 396 aaKnown RBP9.71□□□□□ -0.86
TMEM116-209ENST00000550020 KCNA1Q09470 495 aa9.71□□□□□ -0.86
TMEM116-209ENST00000550020 SPP2Q13103 211 aa9.71□□□□□ -0.86
TMEM116-209ENST00000550020 ITGB3BPQ13352 177 aaPredicted RBP9.71□□□□□ -0.86
TMEM116-209ENST00000550020 DRAP1Q14919 205 aaPredicted RBP9.71□□□□□ -0.86
TMEM116-209ENST00000550020 MUM1L1Q5H9M0 696 aa9.71□□□□□ -0.86
TMEM116-209ENST00000550020 SMYD5Q6GMV2 418 aa9.71□□□□□ -0.86
TMEM116-209ENST00000550020 MIS18BP1Q6P0N0 1132 aa9.71□□□□□ -0.86
TMEM116-209ENST00000550020 VSIG10LQ86VR7 867 aa9.71□□□□□ -0.86
TMEM116-209ENST00000550020 TMC2Q8TDI7 906 aa9.71□□□□□ -0.86
TMEM116-209ENST00000550020 MORC4Q8TE76 937 aa9.71□□□□□ -0.86
TMEM116-209ENST00000550020 WHAMMQ8TF30 809 aa9.71□□□□□ -0.86
TMEM116-209ENST00000550020 U2AF1L4Q8WU68 220 aaKnown RBP9.71□□□□□ -0.86
TMEM116-209ENST00000550020 RFFLQ8WZ73 363 aa9.71□□□□□ -0.86
TMEM116-209ENST00000550020 CAVIN3Q969G5 261 aa9.71□□□□□ -0.86
TMEM116-209ENST00000550020 IFT74Q96LB3 600 aa9.71□□□□□ -0.86
TMEM116-209ENST00000550020 MPHOSPH6Q99547 160 aaKnown RBP9.71□□□□□ -0.86
TMEM116-209ENST00000550020 TEX13BQ9BXU2 312 aa9.71□□□□□ -0.86
TMEM116-209ENST00000550020 ACAD9Q9H845 621 aa9.71□□□□□ -0.86
TMEM116-209ENST00000550020 HOMER2Q9NSB8 354 aa9.71□□□□□ -0.86
TMEM116-209ENST00000550020 CWC15Q9P013 229 aaKnown RBP9.71□□□□□ -0.86
TMEM116-209ENST00000550020 PKD2L1Q9P0L9 805 aa9.71□□□□□ -0.86
TMEM116-209ENST00000550020 WRAP73Q9P2S5 460 aaPredicted RBP9.71□□□□□ -0.86
TMEM116-209ENST00000550020 FBXO40Q9UH90 709 aa9.71□□□□□ -0.86
TMEM116-209ENST00000550020 NENFQ9UMX5 172 aa9.71□□□□□ -0.86
TMEM116-209ENST00000550020 NCANO14594 1321 aa9.71□□□□□ -0.86
TMEM116-209ENST00000550020 ANKRD62A6NC57 917 aa9.7□□□□□ -0.86
TMEM116-209ENST00000550020 GOLGA6BA6NDN3 693 aa9.7□□□□□ -0.86
TMEM116-209ENST00000550020 TMCO5BA8MYB1 307 aa9.7□□□□□ -0.86
TMEM116-209ENST00000550020 MIF4GDA9UHW6 222 aaKnown RBP9.7□□□□□ -0.86
TMEM116-209ENST00000550020 GOLGA8KD6RF30 607 aa9.7□□□□□ -0.86
TMEM116-209ENST00000550020 FZD9O00144 591 aa9.7□□□□□ -0.86
TMEM116-209ENST00000550020 KCNK3O14649 394 aa9.7□□□□□ -0.86
TMEM116-209ENST00000550020 NCK2O43639 380 aa9.7□□□□□ -0.86
TMEM116-209ENST00000550020 HSF2BPO75031 334 aa9.7□□□□□ -0.86
TMEM116-209ENST00000550020 DGAT1O75907 488 aa9.7□□□□□ -0.86
TMEM116-209ENST00000550020 FTCDO95954 541 aa9.7□□□□□ -0.86
TMEM116-209ENST00000550020 NR3C2P08235 984 aa9.7□□□□□ -0.86
TMEM116-209ENST00000550020 HSPA6P17066 643 aa9.7□□□□□ -0.86
TMEM116-209ENST00000550020 PTPRAP18433 802 aa9.7□□□□□ -0.86
TMEM116-209ENST00000550020 MATR3P43243 847 aaKnown RBP eCLIP9.7□□□□□ -0.864e-7■■□□□ 13.3
TMEM116-209ENST00000550020 HADHBP55084 474 aaKnown RBP9.7□□□□□ -0.86
TMEM116-209ENST00000550020 PPFIA1Q13136 1202 aa9.7□□□□□ -0.86
TMEM116-209ENST00000550020 CUL1Q13616 776 aa9.7□□□□□ -0.86
TMEM116-209ENST00000550020 TCEAL1Q15170 157 aa9.7□□□□□ -0.86
TMEM116-209ENST00000550020 NOL9Q5SY16 702 aaKnown RBP9.7□□□□□ -0.86
TMEM116-209ENST00000550020 FAM102BQ5T8I3 360 aa9.7□□□□□ -0.86
TMEM116-209ENST00000550020 SNRNP48Q6IEG0 339 aaKnown RBP9.7□□□□□ -0.86
TMEM116-209ENST00000550020 SLC30A10Q6XR72 485 aa9.7□□□□□ -0.86
TMEM116-209ENST00000550020 LEKR1Q6ZMV7 388 aa9.7□□□□□ -0.86
TMEM116-209ENST00000550020 ENOSF1Q7L5Y1 443 aa9.7□□□□□ -0.86
TMEM116-209ENST00000550020 SLFN11Q7Z7L1 901 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms