RNA–Protein interactions for RNA: ENST00000549396.5

PPFIA2-216, Transcript of PTPRF interacting protein alpha 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA2, Length 5,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-216ENST00000549396 MFAP3LO75121 409 aa9.93□□□□□ -0.82
PPFIA2-216ENST00000549396 NR3C2P08235 984 aa9.93□□□□□ -0.82
PPFIA2-216ENST00000549396 STAG3L1P0CL83 205 aa9.93□□□□□ -0.82
PPFIA2-216ENST00000549396 RBP5P82980 135 aa9.93□□□□□ -0.82
PPFIA2-216ENST00000549396 DPCR1Q3MIW9 517 aa9.93□□□□□ -0.82
PPFIA2-216ENST00000549396 ITPRIPL1Q6GPH6 555 aa9.93□□□□□ -0.82
PPFIA2-216ENST00000549396 C4orf22Q6V702 233 aa9.93□□□□□ -0.82
PPFIA2-216ENST00000549396 ARHGAP18Q8N392 663 aa9.93□□□□□ -0.82
PPFIA2-216ENST00000549396 FAM149B1Q96BN6 582 aa9.93□□□□□ -0.82
PPFIA2-216ENST00000549396 PGBD1Q96JS3 809 aa9.93□□□□□ -0.82
PPFIA2-216ENST00000549396 FTOQ9C0B1 505 aaKnown RBP eCLIP9.93□□□□□ -0.82
PPFIA2-216ENST00000549396 MEIS1O00470 390 aa9.92□□□□□ -0.82
PPFIA2-216ENST00000549396 GPC5P78333 572 aa9.92□□□□□ -0.82
PPFIA2-216ENST00000549396 PCSK9Q8NBP7 692 aaKnown RBP9.92□□□□□ -0.82
PPFIA2-216ENST00000549396 CNOT10Q9H9A5 744 aaKnown RBP9.92□□□□□ -0.82
PPFIA2-216ENST00000549396 GPBP1L1Q9HC44 474 aaPredicted RBP9.92□□□□□ -0.82
PPFIA2-216ENST00000549396 ITIH6Q6UXX5 1313 aa9.92□□□□□ -0.82
PPFIA2-216ENST00000549396 FAM208AQ9UK61 1670 aaKnown RBP9.92□□□□□ -0.82
PPFIA2-216ENST00000549396 ACADSBP45954 432 aa9.92□□□□□ -0.82
PPFIA2-216ENST00000549396 RBL2Q08999 1139 aa9.92□□□□□ -0.82
PPFIA2-216ENST00000549396 SYDE1Q6ZW31 735 aaPredicted RBP9.92□□□□□ -0.82
PPFIA2-216ENST00000549396 ZBTB33Q86T24 672 aa9.92□□□□□ -0.82
PPFIA2-216ENST00000549396 IDI2Q9BXS1 227 aa9.92□□□□□ -0.82
PPFIA2-216ENST00000549396 NHEJ1Q9H9Q4 299 aaPredicted RBP9.92□□□□□ -0.82
PPFIA2-216ENST00000549396 PCDHB8Q9UN66 801 aa9.92□□□□□ -0.82
PPFIA2-216ENST00000549396 TMX2Q9Y320 296 aa9.92□□□□□ -0.82
PPFIA2-216ENST00000549396 STRNO43815 780 aa9.92□□□□□ -0.82
PPFIA2-216ENST00000549396 EVI5O60447 810 aa9.92□□□□□ -0.82
PPFIA2-216ENST00000549396 DDX5P17844 614 aaKnown RBP9.92□□□□□ -0.82
PPFIA2-216ENST00000549396 CTNNA1P35221 906 aaKnown RBP9.92□□□□□ -0.82
PPFIA2-216ENST00000549396 CACNB3P54284 484 aa9.92□□□□□ -0.82
PPFIA2-216ENST00000549396 KRT31Q15323 416 aa9.92□□□□□ -0.82
PPFIA2-216ENST00000549396 MAPRE1Q15691 268 aaKnown RBP9.92□□□□□ -0.82
PPFIA2-216ENST00000549396 ZNF827Q17R98 1081 aa9.92□□□□□ -0.82
PPFIA2-216ENST00000549396 KRT71Q3SY84 523 aa9.92□□□□□ -0.82
PPFIA2-216ENST00000549396 KCTD6Q8NC69 237 aa9.92□□□□□ -0.82
PPFIA2-216ENST00000549396 TTC16Q8NEE8 873 aa9.92□□□□□ -0.82
PPFIA2-216ENST00000549396 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.92□□□□□ -0.82
PPFIA2-216ENST00000549396 DDX41Q9UJV9 622 aaKnown RBP9.92□□□□□ -0.82
PPFIA2-216ENST00000549396 PCDHA13Q9Y5I0 950 aa9.92□□□□□ -0.82
PPFIA2-216ENST00000549396 IGSF9BQ9UPX0 1349 aa9.92□□□□□ -0.82
PPFIA2-216ENST00000549396 NOL3O60936 208 aaKnown RBP9.92□□□□□ -0.82
PPFIA2-216ENST00000549396 PRKCBP05771 671 aa9.92□□□□□ -0.82
PPFIA2-216ENST00000549396 MAPTP10636 758 aaKnown RBP9.92□□□□□ -0.82
PPFIA2-216ENST00000549396 CBX1P83916 185 aa9.92□□□□□ -0.82
PPFIA2-216ENST00000549396 ATP11AP98196 1134 aa9.92□□□□□ -0.82
PPFIA2-216ENST00000549396 SPDYE2Q495Y8 402 aa9.92□□□□□ -0.82
PPFIA2-216ENST00000549396 SGO2Q562F6 1265 aa9.92□□□□□ -0.82
PPFIA2-216ENST00000549396 OR6B3Q8NGW1 331 aa9.92□□□□□ -0.82
PPFIA2-216ENST00000549396 SOCS4Q8WXH5 440 aa9.92□□□□□ -0.82
PPFIA2-216ENST00000549396 VCX3BQ9H321 246 aa9.92□□□□□ -0.82
PPFIA2-216ENST00000549396 DNAJC12Q9UKB3 198 aa9.92□□□□□ -0.82
PPFIA2-216ENST00000549396 AGO2Q9UKV8 859 aaKnown RBP9.92□□□□□ -0.82
PPFIA2-216ENST00000549396 ERICH4A6NGS2 130 aa9.92□□□□□ -0.82
PPFIA2-216ENST00000549396 POLRMTO00411 1230 aaKnown RBP9.92□□□□□ -0.82
PPFIA2-216ENST00000549396 NDUFA10O95299 355 aa9.92□□□□□ -0.82
PPFIA2-216ENST00000549396 CDC27P30260 824 aa9.92□□□□□ -0.82
PPFIA2-216ENST00000549396 USP17L6PQ6QN14 398 aa9.92□□□□□ -0.82
PPFIA2-216ENST00000549396 DCP1BQ8IZD4 617 aaKnown RBP9.92□□□□□ -0.82
PPFIA2-216ENST00000549396 SRBD1Q8N5C6 995 aaKnown RBP9.92□□□□□ -0.82
PPFIA2-216ENST00000549396 ARRDC4Q8NCT1 418 aa9.92□□□□□ -0.82
PPFIA2-216ENST00000549396 ANKS1AQ92625 1134 aa9.92□□□□□ -0.82
PPFIA2-216ENST00000549396 CNTNAP5Q8WYK1 1306 aa9.91□□□□□ -0.82
PPFIA2-216ENST00000549396 CLIC2O15247 247 aa9.91□□□□□ -0.82
PPFIA2-216ENST00000549396 GTF2H1P32780 548 aa9.91□□□□□ -0.82
PPFIA2-216ENST00000549396 NNMTP40261 264 aa9.91□□□□□ -0.82
PPFIA2-216ENST00000549396 PSMC4P43686 418 aa9.91□□□□□ -0.82
PPFIA2-216ENST00000549396 ITKQ08881 620 aa9.91□□□□□ -0.82
PPFIA2-216ENST00000549396 CACNA2D3Q8IZS8 1091 aa9.91□□□□□ -0.82
PPFIA2-216ENST00000549396 FBXL13Q8NEE6 735 aa9.91□□□□□ -0.82
PPFIA2-216ENST00000549396 FAM71BQ8TC56 605 aa9.91□□□□□ -0.82
PPFIA2-216ENST00000549396 EPSTI1Q96J88 318 aa9.91□□□□□ -0.82
PPFIA2-216ENST00000549396 HAUS8Q9BT25 410 aa9.91□□□□□ -0.82
PPFIA2-216ENST00000549396 DDX23Q9BUQ8 820 aaKnown RBP9.91□□□□□ -0.82
PPFIA2-216ENST00000549396 ZMYND15Q9H091 742 aa9.91□□□□□ -0.82
PPFIA2-216ENST00000549396 KLC2Q9H0B6 622 aa9.91□□□□□ -0.82
PPFIA2-216ENST00000549396 WNT8AQ9H1J5 351 aa9.91□□□□□ -0.82
PPFIA2-216ENST00000549396 DPP7Q9UHL4 492 aa9.91□□□□□ -0.82
PPFIA2-216ENST00000549396 HPCAL4Q9UM19 191 aa9.91□□□□□ -0.82
PPFIA2-216ENST00000549396 RHOBTB3O94955 611 aa9.91□□□□□ -0.82
PPFIA2-216ENST00000549396 LARGE1O95461 756 aa9.91□□□□□ -0.82
PPFIA2-216ENST00000549396 CPP00450 1065 aa9.91□□□□□ -0.82
PPFIA2-216ENST00000549396 SUPT20HL2P0C7V6 817 aa9.91□□□□□ -0.82
PPFIA2-216ENST00000549396 VEGFAP15692 232 aaPredicted RBP9.91□□□□□ -0.82
PPFIA2-216ENST00000549396 RPA1P27694 616 aa9.91□□□□□ -0.82
PPFIA2-216ENST00000549396 MESDQ14696 234 aa9.91□□□□□ -0.82
PPFIA2-216ENST00000549396 SV2CQ496J9 727 aa9.91□□□□□ -0.82
PPFIA2-216ENST00000549396 TTBK2Q6IQ55 1244 aa9.91□□□□□ -0.82
PPFIA2-216ENST00000549396 HAUS6Q7Z4H7 955 aa9.91□□□□□ -0.82
PPFIA2-216ENST00000549396 PLEKHH3Q7Z736 793 aa9.91□□□□□ -0.82
PPFIA2-216ENST00000549396 CDKL3Q8IVW4 592 aaPredicted RBP9.91□□□□□ -0.82
PPFIA2-216ENST00000549396 KIAA1683Q9H0B3 1180 aa9.91□□□□□ -0.82
PPFIA2-216ENST00000549396 PPCSQ9HAB8 311 aa9.91□□□□□ -0.82
PPFIA2-216ENST00000549396 UBN1Q9NPG3 1134 aa9.91□□□□□ -0.82
PPFIA2-216ENST00000549396 FARP1Q9Y4F1 1045 aaPredicted RBP9.91□□□□□ -0.82
PPFIA2-216ENST00000549396 PARP4Q9UKK3 1724 aaKnown RBP9.91□□□□□ -0.82
PPFIA2-216ENST00000549396 MYPNQ86TC9 1320 aa9.91□□□□□ -0.82
PPFIA2-216ENST00000549396 ECM2O94769 699 aaPredicted RBP9.91□□□□□ -0.82
PPFIA2-216ENST00000549396 INHBAP08476 426 aa9.91□□□□□ -0.82
PPFIA2-216ENST00000549396 TGFB3P10600 412 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms