RNA–Protein interactions for RNA: ENST00000549243.5

SLC48A1-207, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 577 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-207ENST00000549243 TRIM29Q14134 588 aa21.9■■□□□ 1.1
SLC48A1-207ENST00000549243 CTTNQ14247 550 aaKnown RBP21.9■■□□□ 1.1
SLC48A1-207ENST00000549243 LRRC55Q6ZSA7 311 aa21.9■■□□□ 1.1
SLC48A1-207ENST00000549243 DIS3L2Q8IYB7 885 aaKnown RBP21.9■■□□□ 1.1
SLC48A1-207ENST00000549243 SLFN12Q8IYM2 578 aa21.9■■□□□ 1.1
SLC48A1-207ENST00000549243 MICAL1Q8TDZ2 1067 aa21.9■■□□□ 1.1
SLC48A1-207ENST00000549243 PPP2R3CQ969Q6 453 aa21.9■■□□□ 1.1
SLC48A1-207ENST00000549243 DYDC2Q96IM9 177 aa21.9■■□□□ 1.1
SLC48A1-207ENST00000549243 CEP170P1Q96L14 293 aa21.9■■□□□ 1.1
SLC48A1-207ENST00000549243 HOXA2O43364 376 aa21.89■■□□□ 1.09
SLC48A1-207ENST00000549243 LAG3P18627 525 aa21.89■■□□□ 1.09
SLC48A1-207ENST00000549243 SFPQP23246 707 aaKnown RBP eCLIP21.89■■□□□ 1.09
SLC48A1-207ENST00000549243 PBX3P40426 434 aa21.89■■□□□ 1.09
SLC48A1-207ENST00000549243 POLGP54098 1239 aaPredicted RBP21.89■■□□□ 1.09
SLC48A1-207ENST00000549243 CDC42EP1Q00587 391 aa21.89■■□□□ 1.09
SLC48A1-207ENST00000549243 SPIRE1Q08AE8 756 aa21.89■■□□□ 1.09
SLC48A1-207ENST00000549243 CLLU1OSQ5K130 101 aa21.89■■□□□ 1.09
SLC48A1-207ENST00000549243 GJD3Q8N144 294 aa21.89■■□□□ 1.09
SLC48A1-207ENST00000549243 HELQQ8TDG4 1101 aa21.89■■□□□ 1.09
SLC48A1-207ENST00000549243 SLC7A3Q8WY07 619 aa21.89■■□□□ 1.09
SLC48A1-207ENST00000549243 JPH2Q9BR39 696 aaPredicted RBP21.89■■□□□ 1.09
SLC48A1-207ENST00000549243 DACT1Q9NYF0 836 aa21.89■■□□□ 1.09
SLC48A1-207ENST00000549243 C5orf42Q9H799 3197 aa21.89■■□□□ 1.09
SLC48A1-207ENST00000549243 A0A0U1RQF3 1178 aa21.88■■□□□ 1.09
SLC48A1-207ENST00000549243 WNT7AO00755 349 aa21.88■■□□□ 1.09
SLC48A1-207ENST00000549243 ZBTB39O15060 712 aa21.88■■□□□ 1.09
SLC48A1-207ENST00000549243 YWHABP31946 246 aaKnown RBP21.88■■□□□ 1.09
SLC48A1-207ENST00000549243 NDUFV1P49821 464 aa21.88■■□□□ 1.09
SLC48A1-207ENST00000549243 GUCY1B3Q02153 619 aa21.88■■□□□ 1.09
SLC48A1-207ENST00000549243 ADAM15Q13444 863 aa21.88■■□□□ 1.09
SLC48A1-207ENST00000549243 LONRF3Q496Y0 759 aa21.88■■□□□ 1.09
SLC48A1-207ENST00000549243 TWF2Q6IBS0 349 aaKnown RBP21.88■■□□□ 1.09
SLC48A1-207ENST00000549243 ZNF410Q86VK4 478 aa21.88■■□□□ 1.09
SLC48A1-207ENST00000549243 TPH2Q8IWU9 490 aa21.88■■□□□ 1.09
SLC48A1-207ENST00000549243 LRRC43Q8N309 656 aa21.88■■□□□ 1.09
SLC48A1-207ENST00000549243 TMEM143Q96AN5 459 aa21.88■■□□□ 1.09
SLC48A1-207ENST00000549243 TLR9Q9NR96 1032 aa21.88■■□□□ 1.09
SLC48A1-207ENST00000549243 PIN4Q9Y237 131 aaKnown RBP21.88■■□□□ 1.09
SLC48A1-207ENST00000549243 ATF7P17544 494 aaPredicted RBP21.87■■□□□ 1.09
SLC48A1-207ENST00000549243 COL9A1P20849 921 aa21.87■■□□□ 1.09
SLC48A1-207ENST00000549243 ERVFC1P60507 584 aa21.87■■□□□ 1.09
SLC48A1-207ENST00000549243 UBE3AQ05086 875 aa21.87■■□□□ 1.09
SLC48A1-207ENST00000549243 CALCRLQ16602 461 aa21.87■■□□□ 1.09
SLC48A1-207ENST00000549243 XKR9Q5GH70 373 aa21.87■■□□□ 1.09
SLC48A1-207ENST00000549243 CATSPER4Q7RTX7 472 aa21.87■■□□□ 1.09
SLC48A1-207ENST00000549243 ZNF598Q86UK7 904 aaKnown RBP21.87■■□□□ 1.09
SLC48A1-207ENST00000549243 CCDC83Q8IWF9 413 aa21.87■■□□□ 1.09
SLC48A1-207ENST00000549243 C4orf19Q8IY42 314 aa21.87■■□□□ 1.09
SLC48A1-207ENST00000549243 C1QTNF1Q9BXJ1 281 aa21.87■■□□□ 1.09
SLC48A1-207ENST00000549243 INO80BQ9C086 356 aaPredicted RBP21.87■■□□□ 1.09
SLC48A1-207ENST00000549243 DHX33Q9H6R0 707 aaKnown RBP21.87■■□□□ 1.09
SLC48A1-207ENST00000549243 RAPGEFL1Q9UHV5 662 aa21.87■■□□□ 1.09
SLC48A1-207ENST00000549243 FAM50BQ9Y247 325 aa21.87■■□□□ 1.09
SLC48A1-207ENST00000549243 COL4A3BPQ9Y5P4 624 aa21.87■■□□□ 1.09
SLC48A1-207ENST00000549243 SRGAP2CP0DJJ0 459 aa21.86■■□□□ 1.09
SLC48A1-207ENST00000549243 ATP2B1P20020 1258 aa21.86■■□□□ 1.09
SLC48A1-207ENST00000549243 CSPP1Q1MSJ5 1256 aa21.86■■□□□ 1.09
SLC48A1-207ENST00000549243 KCNT2Q6UVM3 1135 aa21.86■■□□□ 1.09
SLC48A1-207ENST00000549243 PRPF31Q8WWY3 499 aaKnown RBP21.86■■□□□ 1.09
SLC48A1-207ENST00000549243 LPPQ93052 612 aa21.86■■□□□ 1.09
SLC48A1-207ENST00000549243 ZNF558Q96NG5 402 aa21.86■■□□□ 1.09
SLC48A1-207ENST00000549243 ZSWIM4Q9H7M6 989 aa21.86■■□□□ 1.09
SLC48A1-207ENST00000549243 TLE6Q9H808 572 aa21.86■■□□□ 1.09
SLC48A1-207ENST00000549243 CHST12Q9NRB3 414 aa21.86■■□□□ 1.09
SLC48A1-207ENST00000549243 PCDHA12Q9UN75 941 aa21.86■■□□□ 1.09
SLC48A1-207ENST00000549243 LIMCH1Q9UPQ0 1083 aa21.86■■□□□ 1.09
SLC48A1-207ENST00000549243 PER2O15055 1255 aa21.85■■□□□ 1.09
SLC48A1-207ENST00000549243 NEMFO60524 1076 aa21.85■■□□□ 1.09
SLC48A1-207ENST00000549243 EOMESO95936 686 aa21.85■■□□□ 1.09
SLC48A1-207ENST00000549243 RFC5P40937 340 aa21.85■■□□□ 1.09
SLC48A1-207ENST00000549243 TXKP42681 527 aa21.85■■□□□ 1.09
SLC48A1-207ENST00000549243 PHKA2P46019 1235 aa21.85■■□□□ 1.09
SLC48A1-207ENST00000549243 EMC2Q15006 297 aa21.85■■□□□ 1.09
SLC48A1-207ENST00000549243 OTUD6AQ7L8S5 288 aa21.85■■□□□ 1.09
SLC48A1-207ENST00000549243 EFHBQ8N7U6 833 aa21.85■■□□□ 1.09
SLC48A1-207ENST00000549243 PSPC1Q8WXF1 523 aaKnown RBP21.85■■□□□ 1.09
SLC48A1-207ENST00000549243 EIF2AK1Q9BQI3 630 aaKnown RBP21.85■■□□□ 1.09
SLC48A1-207ENST00000549243 TTC12Q9H892 705 aaPredicted RBP21.85■■□□□ 1.09
SLC48A1-207ENST00000549243 IFT122Q9HBG6 1241 aa21.85■■□□□ 1.09
SLC48A1-207ENST00000549243 CD207Q9UJ71 328 aa21.85■■□□□ 1.09
SLC48A1-207ENST00000549243 MBTPS2O43462 519 aa21.84■■□□□ 1.09
SLC48A1-207ENST00000549243 SLITRK3O94933 977 aa21.84■■□□□ 1.09
SLC48A1-207ENST00000549243 RBM10P98175 930 aaKnown RBP21.84■■□□□ 1.09
SLC48A1-207ENST00000549243 LAMTOR4Q0VGL1 99 aa21.84■■□□□ 1.09
SLC48A1-207ENST00000549243 PLPP4Q5VZY2 271 aa21.84■■□□□ 1.09
SLC48A1-207ENST00000549243 EXOC8Q8IYI6 725 aa21.84■■□□□ 1.09
SLC48A1-207ENST00000549243 MRPS27Q92552 414 aaKnown RBP21.84■■□□□ 1.09
SLC48A1-207ENST00000549243 CLEC1BQ9P126 229 aa21.84■■□□□ 1.09
SLC48A1-207ENST00000549243 BARX2Q9UMQ3 279 aaPredicted RBP21.84■■□□□ 1.09
SLC48A1-207ENST00000549243 PPME1Q9Y570 386 aa21.84■■□□□ 1.09
SLC48A1-207ENST00000549243 GLP2RO95838 553 aa21.83■■□□□ 1.09
SLC48A1-207ENST00000549243 ZP2Q05996 745 aa21.83■■□□□ 1.09
SLC48A1-207ENST00000549243 SMAD4Q13485 552 aaKnown RBP21.83■■□□□ 1.09
SLC48A1-207ENST00000549243 SMAD2Q15796 467 aaKnown RBP21.83■■□□□ 1.09
SLC48A1-207ENST00000549243 MINDY3Q9H8M7 445 aa21.83■■□□□ 1.09
SLC48A1-207ENST00000549243 ENTPD7Q9NQZ7 604 aa21.83■■□□□ 1.09
SLC48A1-207ENST00000549243 FAM105AQ9NUU6 356 aa21.83■■□□□ 1.09
SLC48A1-207ENST00000549243 PUF60Q9UHX1 559 aaKnown RBP21.83■■□□□ 1.09
SLC48A1-207ENST00000549243 A0A087WWV3 80 aa21.82■■□□□ 1.08
SLC48A1-207ENST00000549243 FAM86C2PA6NEL3 165 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms