RNA–Protein interactions for RNA: ENST00000548821.1

GCN1-205, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 504 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-205ENST00000548821 TMEM184AQ6ZMB5 413 aa10.79□□□□□ -0.68
GCN1-205ENST00000548821 CATSPER4Q7RTX7 472 aa10.79□□□□□ -0.68
GCN1-205ENST00000548821 SRGAP1Q7Z6B7 1085 aa10.79□□□□□ -0.68
GCN1-205ENST00000548821 RBM23Q86U06 439 aaKnown RBP10.79□□□□□ -0.68
GCN1-205ENST00000548821 PPFIBP1Q86W92 1011 aa10.79□□□□□ -0.68
GCN1-205ENST00000548821 RHPN2Q8IUC4 686 aa10.79□□□□□ -0.68
GCN1-205ENST00000548821 C4orf19Q8IY42 314 aa10.79□□□□□ -0.68
GCN1-205ENST00000548821 LRRC71Q8N4P6 559 aa10.79□□□□□ -0.68
GCN1-205ENST00000548821 LINC01465Q8N7H1 131 aa10.79□□□□□ -0.68
GCN1-205ENST00000548821 TMEM40Q8WWA1 233 aa10.79□□□□□ -0.68
GCN1-205ENST00000548821 PSPC1Q8WXF1 523 aaKnown RBP10.79□□□□□ -0.68
GCN1-205ENST00000548821 CASP10Q92851 521 aa10.79□□□□□ -0.68
GCN1-205ENST00000548821 CEP170P1Q96L14 293 aa10.79□□□□□ -0.68
GCN1-205ENST00000548821 NECTIN4Q96NY8 510 aa10.79□□□□□ -0.68
GCN1-205ENST00000548821 FAM193BQ96PV7 902 aaPredicted RBP10.79□□□□□ -0.68
GCN1-205ENST00000548821 UIMC1Q96RL1 719 aa10.79□□□□□ -0.68
GCN1-205ENST00000548821 PPP1R16BQ96T49 567 aa10.79□□□□□ -0.68
GCN1-205ENST00000548821 TCF25Q9BQ70 676 aa10.79□□□□□ -0.68
GCN1-205ENST00000548821 PHF7Q9BWX1 381 aaPredicted RBP10.79□□□□□ -0.68
GCN1-205ENST00000548821 CYP26B1Q9NR63 512 aa10.79□□□□□ -0.68
GCN1-205ENST00000548821 ORC3Q9UBD5 711 aaPredicted RBP10.79□□□□□ -0.68
GCN1-205ENST00000548821 NR2E1Q9Y466 385 aa10.79□□□□□ -0.68
GCN1-205ENST00000548821 SPTBN5Q9NRC6 3674 aaKnown RBP10.79□□□□□ -0.68
GCN1-205ENST00000548821 TTC3P53804 2025 aa10.79□□□□□ -0.68
GCN1-205ENST00000548821 IGKV6-21A0A0C4DH24 114 aa10.78□□□□□ -0.68
GCN1-205ENST00000548821 M0R2N6 131 aa10.78□□□□□ -0.68
GCN1-205ENST00000548821 ZNF862O60290 1169 aa10.78□□□□□ -0.68
GCN1-205ENST00000548821 MGEA5O60502 916 aa10.78□□□□□ -0.68
GCN1-205ENST00000548821 ZNF623O75123 536 aa10.78□□□□□ -0.68
GCN1-205ENST00000548821 AXLP30530 894 aa10.78□□□□□ -0.68
GCN1-205ENST00000548821 ITIH3Q06033 890 aa10.78□□□□□ -0.68
GCN1-205ENST00000548821 DUSP6Q16828 381 aa10.78□□□□□ -0.68
GCN1-205ENST00000548821 SKAP1Q86WV1 359 aa10.78□□□□□ -0.68
GCN1-205ENST00000548821 SMRP1Q8NCR6 262 aa10.78□□□□□ -0.68
GCN1-205ENST00000548821 ETNPPLQ8TBG4 499 aa10.78□□□□□ -0.68
GCN1-205ENST00000548821 MSLNLQ96KJ4 702 aa10.78□□□□□ -0.68
GCN1-205ENST00000548821 CASD1Q96PB1 797 aa10.78□□□□□ -0.68
GCN1-205ENST00000548821 IRF2BPLQ9H1B7 796 aa10.78□□□□□ -0.68
GCN1-205ENST00000548821 PCDHA12Q9UN75 941 aa10.78□□□□□ -0.68
GCN1-205ENST00000548821 BDP1A6H8Y1 2624 aa10.78□□□□□ -0.68
GCN1-205ENST00000548821 CNTNAP2Q9UHC6 1331 aa10.78□□□□□ -0.68
GCN1-205ENST00000548821 COL4A4P53420 1690 aaPredicted RBP10.77□□□□□ -0.69
GCN1-205ENST00000548821 A0A087WZ62 844 aa10.77□□□□□ -0.69
GCN1-205ENST00000548821 ERLIN2O94905 339 aa10.77□□□□□ -0.69
GCN1-205ENST00000548821 TDP2O95551 362 aa10.77□□□□□ -0.69
GCN1-205ENST00000548821 ALDH2P05091 517 aa10.77□□□□□ -0.69
GCN1-205ENST00000548821 FGFR1P11362 822 aa10.77□□□□□ -0.69
GCN1-205ENST00000548821 XRCC6P12956 609 aaKnown RBP eCLIP10.77□□□□□ -0.69
GCN1-205ENST00000548821 YWHABP31946 246 aaKnown RBP10.77□□□□□ -0.69
GCN1-205ENST00000548821 CA8P35219 290 aa10.77□□□□□ -0.69
GCN1-205ENST00000548821 PHKA2P46019 1235 aa10.77□□□□□ -0.69
GCN1-205ENST00000548821 POU5F1BQ06416 359 aa10.77□□□□□ -0.69
GCN1-205ENST00000548821 SCRN1Q12765 414 aa10.77□□□□□ -0.69
GCN1-205ENST00000548821 CAMK1Q14012 370 aa10.77□□□□□ -0.69
GCN1-205ENST00000548821 CLUL1Q15846 466 aa10.77□□□□□ -0.69
GCN1-205ENST00000548821 HERC4Q5GLZ8 1057 aaPredicted RBP10.77□□□□□ -0.69
GCN1-205ENST00000548821 B3GNT9Q6UX72 402 aa10.77□□□□□ -0.69
GCN1-205ENST00000548821 PIK3AP1Q6ZUJ8 805 aa10.77□□□□□ -0.69
GCN1-205ENST00000548821 CCDC51Q96ER9 411 aa10.77□□□□□ -0.69
GCN1-205ENST00000548821 RIPOR3Q96MK2 946 aa10.77□□□□□ -0.69
GCN1-205ENST00000548821 FDXACB1Q9BRP7 624 aaPredicted RBP10.77□□□□□ -0.69
GCN1-205ENST00000548821 EMILIN2Q9BXX0 1053 aa10.77□□□□□ -0.69
GCN1-205ENST00000548821 CWH43Q9H720 699 aa10.77□□□□□ -0.69
GCN1-205ENST00000548821 KCNMB3Q9NPA1 279 aa10.77□□□□□ -0.69
GCN1-205ENST00000548821 DZANK1Q9NVP4 752 aa10.77□□□□□ -0.69
GCN1-205ENST00000548821 PIN4Q9Y237 131 aaKnown RBP10.77□□□□□ -0.69
GCN1-205ENST00000548821 COL4A3BPQ9Y5P4 624 aa10.77□□□□□ -0.69
GCN1-205ENST00000548821 STK24Q9Y6E0 443 aa10.77□□□□□ -0.69
GCN1-205ENST00000548821 PTPRSQ13332 1948 aa10.77□□□□□ -0.69
GCN1-205ENST00000548821 DOCK5Q9H7D0 1870 aa10.76□□□□□ -0.69
GCN1-205ENST00000548821 XIRP2A4UGR9 3374 aa10.76□□□□□ -0.69
GCN1-205ENST00000548821 FSCN2O14926 492 aa10.76□□□□□ -0.69
GCN1-205ENST00000548821 CSPG5O95196 566 aa10.76□□□□□ -0.69
GCN1-205ENST00000548821 CXCL14O95715 111 aa10.76□□□□□ -0.69
GCN1-205ENST00000548821 DNAJB1P25685 340 aa10.76□□□□□ -0.69
GCN1-205ENST00000548821 IRS1P35568 1242 aa10.76□□□□□ -0.69
GCN1-205ENST00000548821 TECP42680 631 aa10.76□□□□□ -0.69
GCN1-205ENST00000548821 MTHFRP42898 656 aa10.76□□□□□ -0.69
GCN1-205ENST00000548821 ORC2Q13416 577 aaPredicted RBP10.76□□□□□ -0.69
GCN1-205ENST00000548821 XKR9Q5GH70 373 aa10.76□□□□□ -0.69
GCN1-205ENST00000548821 NOMO2Q5JPE7 1267 aa10.76□□□□□ -0.69
GCN1-205ENST00000548821 MRPL43Q8N983 215 aaKnown RBP10.76□□□□□ -0.69
GCN1-205ENST00000548821 ERMNQ8TAM6 284 aa10.76□□□□□ -0.69
GCN1-205ENST00000548821 EDAQ92838 391 aa10.76□□□□□ -0.69
GCN1-205ENST00000548821 NLRP4Q96MN2 994 aa10.76□□□□□ -0.69
GCN1-205ENST00000548821 MTRQ99707 1265 aa10.76□□□□□ -0.69
GCN1-205ENST00000548821 ANKEF1Q9NU02 776 aa10.76□□□□□ -0.69
GCN1-205ENST00000548821 FAM105AQ9NUU6 356 aa10.76□□□□□ -0.69
GCN1-205ENST00000548821 KCNJ14Q9UNX9 436 aa10.76□□□□□ -0.69
GCN1-205ENST00000548821 NCOR1O75376 2440 aa10.76□□□□□ -0.69
GCN1-205ENST00000548821 SPDYE4A6NLX3 237 aa10.75□□□□□ -0.69
GCN1-205ENST00000548821 TBX10O75333 385 aa10.75□□□□□ -0.69
GCN1-205ENST00000548821 DGAT1O75907 488 aa10.75□□□□□ -0.69
GCN1-205ENST00000548821 SRGAP2CP0DJJ0 459 aa10.75□□□□□ -0.69
GCN1-205ENST00000548821 GATMP50440 423 aa10.75□□□□□ -0.69
GCN1-205ENST00000548821 BCAR1P56945 870 aa10.75□□□□□ -0.69
GCN1-205ENST00000548821 ERVFC1P60507 584 aa10.75□□□□□ -0.69
GCN1-205ENST00000548821 GNL2Q13823 731 aaKnown RBP10.75□□□□□ -0.69
GCN1-205ENST00000548821 CBX2Q14781 532 aaPredicted RBP10.75□□□□□ -0.69
GCN1-205ENST00000548821 CALCRLQ16602 461 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms