RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 IPO9Q96P70 1041 aaKnown RBP5.57□□□□□ -1.52
SCAF11-210ENST00000547654 THRAP3Q9Y2W1 955 aaKnown RBP5.57□□□□□ -1.52
SCAF11-210ENST00000547654 GOLGA6L22H0YM25 854 aa5.56□□□□□ -1.52
SCAF11-210ENST00000547654 KIF3BO15066 747 aa5.56□□□□□ -1.52
SCAF11-210ENST00000547654 ALDH1L1O75891 902 aa5.56□□□□□ -1.52
SCAF11-210ENST00000547654 GLRX3O76003 335 aaKnown RBP5.56□□□□□ -1.52
SCAF11-210ENST00000547654 PTGS1P23219 599 aa5.56□□□□□ -1.52
SCAF11-210ENST00000547654 DNM2P50570 870 aa5.56□□□□□ -1.52
SCAF11-210ENST00000547654 FOXL1Q12952 345 aa5.56□□□□□ -1.52
SCAF11-210ENST00000547654 PABPC4Q13310 644 aaKnown RBP eCLIP5.56□□□□□ -1.52
SCAF11-210ENST00000547654 BIRC2Q13490 618 aa5.56□□□□□ -1.52
SCAF11-210ENST00000547654 ZNF460Q14592 562 aa5.56□□□□□ -1.52
SCAF11-210ENST00000547654 TBR1Q16650 682 aa5.56□□□□□ -1.52
SCAF11-210ENST00000547654 FAM47CQ5HY64 1035 aa5.56□□□□□ -1.52
SCAF11-210ENST00000547654 TRIM68Q6AZZ1 485 aa5.56□□□□□ -1.52
SCAF11-210ENST00000547654 ZCCHC8Q6NZY4 707 aaKnown RBP5.56□□□□□ -1.52
SCAF11-210ENST00000547654 LRSAM1Q6UWE0 723 aa5.56□□□□□ -1.52
SCAF11-210ENST00000547654 USP30Q70CQ3 517 aa5.56□□□□□ -1.52
SCAF11-210ENST00000547654 CXXC5Q7LFL8 322 aaKnown RBP5.56□□□□□ -1.52
SCAF11-210ENST00000547654 MRGPRGQ86SM5 289 aa5.56□□□□□ -1.52
SCAF11-210ENST00000547654 SGMS1Q86VZ5 419 aa5.56□□□□□ -1.52
SCAF11-210ENST00000547654 LDLRAD3Q86YD5 345 aa5.56□□□□□ -1.52
SCAF11-210ENST00000547654 RTKN2Q8IZC4 609 aa5.56□□□□□ -1.52
SCAF11-210ENST00000547654 IGSF22Q8N9C0 903 aa5.56□□□□□ -1.52
SCAF11-210ENST00000547654 ZG16BQ96DA0 208 aa5.56□□□□□ -1.52
SCAF11-210ENST00000547654 INCENPQ9NQS7 918 aa5.56□□□□□ -1.52
SCAF11-210ENST00000547654 GALNT8Q9NY28 637 aa5.56□□□□□ -1.52
SCAF11-210ENST00000547654 PLA2G3Q9NZ20 509 aa5.56□□□□□ -1.52
SCAF11-210ENST00000547654 GIT1Q9Y2X7 761 aa5.56□□□□□ -1.52
SCAF11-210ENST00000547654 NISCHQ9Y2I1 1504 aa5.55□□□□□ -1.52
SCAF11-210ENST00000547654 PRAMEF25A6NGN4 478 aa5.55□□□□□ -1.52
SCAF11-210ENST00000547654 CAPN14A8MX76 684 aa5.55□□□□□ -1.52
SCAF11-210ENST00000547654 MMEP08473 750 aa5.55□□□□□ -1.52
SCAF11-210ENST00000547654 KRT15P19012 456 aa5.55□□□□□ -1.52
SCAF11-210ENST00000547654 RHBDL3P58872 404 aa5.55□□□□□ -1.52
SCAF11-210ENST00000547654 CRHR2Q13324 411 aa5.55□□□□□ -1.52
SCAF11-210ENST00000547654 EIF4HQ15056 248 aaKnown RBP5.55□□□□□ -1.52
SCAF11-210ENST00000547654 PPP2R5AQ15172 486 aa5.55□□□□□ -1.52
SCAF11-210ENST00000547654 TMEM200BQ69YZ2 307 aa5.55□□□□□ -1.52
SCAF11-210ENST00000547654 LARP4Q71RC2 724 aaKnown RBP eCLIP5.55□□□□□ -1.52
SCAF11-210ENST00000547654 CFHR4Q92496 578 aa5.55□□□□□ -1.52
SCAF11-210ENST00000547654 CRAMP1Q96RY5 1269 aa5.55□□□□□ -1.52
SCAF11-210ENST00000547654 OR10A2Q9H208 303 aa5.55□□□□□ -1.52
SCAF11-210ENST00000547654 NELFAQ9H3P2 528 aa5.55□□□□□ -1.52
SCAF11-210ENST00000547654 KCNH7Q9NS40 1196 aa5.55□□□□□ -1.52
SCAF11-210ENST00000547654 CDC42EP3Q9UKI2 254 aa5.55□□□□□ -1.52
SCAF11-210ENST00000547654 GSTA4O15217 222 aa5.54□□□□□ -1.52
SCAF11-210ENST00000547654 CYP27B1O15528 508 aa5.54□□□□□ -1.52
SCAF11-210ENST00000547654 POU3F2P20265 443 aaPredicted RBP5.54□□□□□ -1.52
SCAF11-210ENST00000547654 OS9Q13438 667 aaPredicted RBP5.54□□□□□ -1.52
SCAF11-210ENST00000547654 GRM7Q14831 915 aa5.54□□□□□ -1.52
SCAF11-210ENST00000547654 PCOLCEQ15113 449 aa5.54□□□□□ -1.52
SCAF11-210ENST00000547654 TTF1Q15361 905 aaPredicted RBP5.54□□□□□ -1.52
SCAF11-210ENST00000547654 FNDC7Q5VTL7 733 aa5.54□□□□□ -1.52
SCAF11-210ENST00000547654 D2HGDHQ8N465 521 aa5.54□□□□□ -1.52
SCAF11-210ENST00000547654 UBR7Q8N806 425 aa5.54□□□□□ -1.52
SCAF11-210ENST00000547654 OR14K1Q8NGZ2 314 aa5.54□□□□□ -1.52
SCAF11-210ENST00000547654 LARP4BQ92615 738 aaKnown RBP5.54□□□□□ -1.52
SCAF11-210ENST00000547654 TSR2Q969E8 191 aaKnown RBP5.54□□□□□ -1.52
SCAF11-210ENST00000547654 RPS6KC1Q96S38 1066 aa5.54□□□□□ -1.52
SCAF11-210ENST00000547654 BTBD2Q9BX70 525 aa5.54□□□□□ -1.52
SCAF11-210ENST00000547654 FAM126AQ9BYI3 521 aaPredicted RBP5.54□□□□□ -1.52
SCAF11-210ENST00000547654 MTFR1LQ9H019 292 aa5.54□□□□□ -1.52
SCAF11-210ENST00000547654 PARPBPQ9NWS1 579 aa5.54□□□□□ -1.52
SCAF11-210ENST00000547654 FAM184BQ9ULE4 1060 aa5.54□□□□□ -1.52
SCAF11-210ENST00000547654 MAPRE3Q9UPY8 281 aa5.54□□□□□ -1.52
SCAF11-210ENST00000547654 TNPO3Q9Y5L0 923 aaKnown RBP5.54□□□□□ -1.52
SCAF11-210ENST00000547654 A0A087X0B3 334 aa5.53□□□□□ -1.52
SCAF11-210ENST00000547654 TSPAN6O43657 245 aa5.53□□□□□ -1.52
SCAF11-210ENST00000547654 CAND2O75155 1236 aa5.53□□□□□ -1.52
SCAF11-210ENST00000547654 ASLP04424 464 aa5.53□□□□□ -1.52
SCAF11-210ENST00000547654 KRT18P05783 430 aaKnown RBP5.53□□□□□ -1.52
SCAF11-210ENST00000547654 MRE11P49959 708 aa5.53□□□□□ -1.52
SCAF11-210ENST00000547654 GUCY2FP51841 1108 aa5.53□□□□□ -1.52
SCAF11-210ENST00000547654 ST5P78524 1137 aa5.53□□□□□ -1.52
SCAF11-210ENST00000547654 HDAC1Q13547 482 aaPredicted RBP5.53□□□□□ -1.52
SCAF11-210ENST00000547654 KRTAP15-1Q3LI76 137 aa5.53□□□□□ -1.52
SCAF11-210ENST00000547654 CC2D1AQ6P1N0 951 aaPredicted RBP5.53□□□□□ -1.52
SCAF11-210ENST00000547654 ADGRE4PQ86SQ3 457 aa5.53□□□□□ -1.52
SCAF11-210ENST00000547654 RNF180Q86T96 592 aa5.53□□□□□ -1.52
SCAF11-210ENST00000547654 CLIP3Q96DZ5 547 aa5.53□□□□□ -1.52
SCAF11-210ENST00000547654 TMEM176AQ96HP8 235 aa5.53□□□□□ -1.52
SCAF11-210ENST00000547654 ASB1Q9Y576 335 aa5.53□□□□□ -1.52
SCAF11-210ENST00000547654 A0A0G2JNJ9 132 aa5.52□□□□□ -1.53
SCAF11-210ENST00000547654 SLC12A8A0AV02 714 aa5.52□□□□□ -1.53
SCAF11-210ENST00000547654 CBX4O00257 560 aa5.52□□□□□ -1.53
SCAF11-210ENST00000547654 SCDO00767 359 aa5.52□□□□□ -1.53
SCAF11-210ENST00000547654 CREB3O43889 395 aa5.52□□□□□ -1.53
SCAF11-210ENST00000547654 RAMP2O60895 175 aa5.52□□□□□ -1.53
SCAF11-210ENST00000547654 POU3F3P20264 500 aaPredicted RBP5.52□□□□□ -1.53
SCAF11-210ENST00000547654 GNALP38405 381 aa5.52□□□□□ -1.53
SCAF11-210ENST00000547654 ECE1P42892 770 aa5.52□□□□□ -1.53
SCAF11-210ENST00000547654 NFE2Q16621 373 aaPredicted RBP5.52□□□□□ -1.53
SCAF11-210ENST00000547654 RAVER1Q8IY67 606 aaKnown RBP5.52□□□□□ -1.53
SCAF11-210ENST00000547654 THEMISQ8N1K5 641 aaPredicted RBP5.52□□□□□ -1.53
SCAF11-210ENST00000547654 SHCBP1Q8NEM2 672 aa5.52□□□□□ -1.53
SCAF11-210ENST00000547654 C16orf92Q96LL3 132 aa5.52□□□□□ -1.53
SCAF11-210ENST00000547654 PRRX2Q99811 253 aa5.52□□□□□ -1.53
SCAF11-210ENST00000547654 ZNF703Q9H7S9 590 aaPredicted RBP5.52□□□□□ -1.53
SCAF11-210ENST00000547654 Q9UFV3 132 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms