RNA–Protein interactions for RNA: ENST00000547263.1

GCN1-202, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-202ENST00000547263 RNF19AQ9NV58 838 aa12.17□□□□□ -0.46
GCN1-202ENST00000547263 FBXO2Q9UK22 296 aaPredicted RBP12.17□□□□□ -0.46
GCN1-202ENST00000547263 GINS2Q9Y248 185 aa12.17□□□□□ -0.46
GCN1-202ENST00000547263 CLIC4Q9Y696 253 aa12.17□□□□□ -0.46
GCN1-202ENST00000547263 ATG2AQ2TAZ0 1938 aa12.17□□□□□ -0.46
GCN1-202ENST00000547263 CDH23Q9H251 3354 aa12.16□□□□□ -0.46
GCN1-202ENST00000547263 A0A087WWV3 80 aa12.16□□□□□ -0.46
GCN1-202ENST00000547263 LPXNO60711 386 aa12.16□□□□□ -0.46
GCN1-202ENST00000547263 ATF7P17544 494 aaPredicted RBP12.16□□□□□ -0.46
GCN1-202ENST00000547263 CDC25AP30304 524 aa12.16□□□□□ -0.46
GCN1-202ENST00000547263 LONP1P36776 959 aaKnown RBP12.16□□□□□ -0.46
GCN1-202ENST00000547263 NFX1Q12986 1120 aaKnown RBP12.16□□□□□ -0.46
GCN1-202ENST00000547263 MAPK7Q13164 816 aa12.16□□□□□ -0.46
GCN1-202ENST00000547263 CAPSQ13938 189 aa12.16□□□□□ -0.46
GCN1-202ENST00000547263 SLC39A14Q15043 492 aa12.16□□□□□ -0.46
GCN1-202ENST00000547263 AMHR2Q16671 573 aa12.16□□□□□ -0.46
GCN1-202ENST00000547263 KRT79Q5XKE5 535 aa12.16□□□□□ -0.46
GCN1-202ENST00000547263 PPP2R2DQ66LE6 453 aa12.16□□□□□ -0.46
GCN1-202ENST00000547263 SPRED2Q7Z698 418 aa12.16□□□□□ -0.46
GCN1-202ENST00000547263 ASAP3Q8TDY4 903 aa12.16□□□□□ -0.46
GCN1-202ENST00000547263 USP28Q96RU2 1077 aa12.16□□□□□ -0.46
GCN1-202ENST00000547263 PPP1R16BQ96T49 567 aa12.16□□□□□ -0.46
GCN1-202ENST00000547263 ADAM2Q99965 735 aa12.16□□□□□ -0.46
GCN1-202ENST00000547263 FOXD4L1Q9NU39 408 aa12.16□□□□□ -0.46
GCN1-202ENST00000547263 AGPAT5Q9NUQ2 364 aa12.16□□□□□ -0.46
GCN1-202ENST00000547263 DDX19AQ9NUU7 478 aaKnown RBP12.16□□□□□ -0.46
GCN1-202ENST00000547263 TMEM161AQ9NX61 479 aa12.16□□□□□ -0.46
GCN1-202ENST00000547263 KIAA1024Q9UPX6 916 aa12.16□□□□□ -0.46
GCN1-202ENST00000547263 SRPRBQ9Y5M8 271 aaKnown RBP12.16□□□□□ -0.46
GCN1-202ENST00000547263 ADGRA3Q8IWK6 1321 aa12.15□□□□□ -0.46
GCN1-202ENST00000547263 A0A0U1RQF3 1178 aa12.15□□□□□ -0.46
GCN1-202ENST00000547263 VWA3AA6NCI4 1184 aa12.15□□□□□ -0.46
GCN1-202ENST00000547263 EPOPA6NHQ4 379 aa12.15□□□□□ -0.46
GCN1-202ENST00000547263 C5orf67F2Z3F1 127 aa12.15□□□□□ -0.46
GCN1-202ENST00000547263 USO1O60763 962 aaKnown RBP12.15□□□□□ -0.46
GCN1-202ENST00000547263 ZNF623O75123 536 aa12.15□□□□□ -0.46
GCN1-202ENST00000547263 ZSCAN22P10073 491 aaPredicted RBP12.15□□□□□ -0.46
GCN1-202ENST00000547263 SFPQP23246 707 aaKnown RBP eCLIP12.15□□□□□ -0.46
GCN1-202ENST00000547263 HOXA11P31270 313 aaPredicted RBP12.15□□□□□ -0.46
GCN1-202ENST00000547263 MBTD1Q05BQ5 628 aa12.15□□□□□ -0.46
GCN1-202ENST00000547263 PKP1Q13835 747 aa12.15□□□□□ -0.46
GCN1-202ENST00000547263 ADGRE1Q14246 886 aa12.15□□□□□ -0.46
GCN1-202ENST00000547263 FAM187BQ17R55 369 aa12.15□□□□□ -0.46
GCN1-202ENST00000547263 PADI6Q6TGC4 694 aa12.15□□□□□ -0.46
GCN1-202ENST00000547263 C1orf186Q6ZWK4 172 aa12.15□□□□□ -0.46
GCN1-202ENST00000547263 CMTR2Q8IYT2 770 aaKnown RBP12.15□□□□□ -0.46
GCN1-202ENST00000547263 DAW1Q8N136 415 aa12.15□□□□□ -0.46
GCN1-202ENST00000547263 SYT2Q8N9I0 419 aaPredicted RBP12.15□□□□□ -0.46
GCN1-202ENST00000547263 RNF149Q8NC42 400 aa12.15□□□□□ -0.46
GCN1-202ENST00000547263 NLRP7Q8WX94 980 aa12.15□□□□□ -0.46
GCN1-202ENST00000547263 ZNF668Q96K58 619 aaPredicted RBP12.15□□□□□ -0.46
GCN1-202ENST00000547263 NLRP4Q96MN2 994 aa12.15□□□□□ -0.46
GCN1-202ENST00000547263 SAMD11Q96NU1 681 aa12.15□□□□□ -0.46
GCN1-202ENST00000547263 NT5C3AQ9H0P0 336 aa12.15□□□□□ -0.46
GCN1-202ENST00000547263 BHMT2Q9H2M3 363 aa12.15□□□□□ -0.46
GCN1-202ENST00000547263 BLOC1S4Q9NUP1 217 aa12.15□□□□□ -0.46
GCN1-202ENST00000547263 MYO9BQ13459 2157 aa12.14□□□□□ -0.47
GCN1-202ENST00000547263 E9PMD0 336 aa12.14□□□□□ -0.47
GCN1-202ENST00000547263 CSDE1O75534 798 aaKnown RBP12.14□□□□□ -0.47
GCN1-202ENST00000547263 F13A1P00488 732 aa12.14□□□□□ -0.47
GCN1-202ENST00000547263 STAG3L1P0CL83 205 aa12.14□□□□□ -0.47
GCN1-202ENST00000547263 FGFR4P22455 802 aa12.14□□□□□ -0.47
GCN1-202ENST00000547263 GUCY2CP25092 1073 aa12.14□□□□□ -0.47
GCN1-202ENST00000547263 SLC12A3P55017 1021 aa12.14□□□□□ -0.47
GCN1-202ENST00000547263 RINT1Q6NUQ1 792 aa12.14□□□□□ -0.47
GCN1-202ENST00000547263 PPP4R3CPQ6ZMV5 832 aa12.14□□□□□ -0.47
GCN1-202ENST00000547263 ECHDC2Q86YB7 292 aa12.14□□□□□ -0.47
GCN1-202ENST00000547263 LINC00301Q8NCQ3 95 aa12.14□□□□□ -0.47
GCN1-202ENST00000547263 RSPH1Q8WYR4 309 aa12.14□□□□□ -0.47
GCN1-202ENST00000547263 BSNDQ8WZ55 320 aa12.14□□□□□ -0.47
GCN1-202ENST00000547263 FAM161BQ96MY7 647 aa12.14□□□□□ -0.47
GCN1-202ENST00000547263 TGS1Q96RS0 853 aaKnown RBP12.14□□□□□ -0.47
GCN1-202ENST00000547263 ZBED2Q9BTP6 218 aa12.14□□□□□ -0.47
GCN1-202ENST00000547263 CCDC113Q9H0I3 377 aa12.14□□□□□ -0.47
GCN1-202ENST00000547263 POLR3FQ9H1D9 316 aaPredicted RBP12.14□□□□□ -0.47
GCN1-202ENST00000547263 GPRC5CQ9NQ84 441 aa12.14□□□□□ -0.47
GCN1-202ENST00000547263 BMP2KQ9NSY1 1161 aaPredicted RBP12.14□□□□□ -0.47
GCN1-202ENST00000547263 RNF216Q9NWF9 866 aaPredicted RBP12.14□□□□□ -0.47
GCN1-202ENST00000547263 DACT1Q9NYF0 836 aa12.14□□□□□ -0.47
GCN1-202ENST00000547263 KCND2Q9NZV8 630 aa12.14□□□□□ -0.47
GCN1-202ENST00000547263 DAXXQ9UER7 740 aaPredicted RBP12.14□□□□□ -0.47
GCN1-202ENST00000547263 ZDHHC9Q9Y397 364 aa12.14□□□□□ -0.47
GCN1-202ENST00000547263 TRANK1O15050 2925 aa12.14□□□□□ -0.47
GCN1-202ENST00000547263 MYH11P35749 1972 aa12.14□□□□□ -0.47
GCN1-202ENST00000547263 ARHGEF35A5YM69 484 aa12.13□□□□□ -0.47
GCN1-202ENST00000547263 INPPL1O15357 1258 aa12.13□□□□□ -0.47
GCN1-202ENST00000547263 PPP6R2O75170 966 aa12.13□□□□□ -0.47
GCN1-202ENST00000547263 YEATS4O95619 227 aa12.13□□□□□ -0.47
GCN1-202ENST00000547263 BRD1O95696 1058 aa12.13□□□□□ -0.47
GCN1-202ENST00000547263 EOMESO95936 686 aa12.13□□□□□ -0.47
GCN1-202ENST00000547263 AXLP30530 894 aa12.13□□□□□ -0.47
GCN1-202ENST00000547263 DDIT3P35638 169 aa12.13□□□□□ -0.47
GCN1-202ENST00000547263 NAMPTP43490 491 aa12.13□□□□□ -0.47
GCN1-202ENST00000547263 PHKA2P46019 1235 aa12.13□□□□□ -0.47
GCN1-202ENST00000547263 TFDP1Q14186 410 aa12.13□□□□□ -0.47
GCN1-202ENST00000547263 UBXN11Q5T124 520 aa12.13□□□□□ -0.47
GCN1-202ENST00000547263 ATL3Q6DD88 541 aa12.13□□□□□ -0.47
GCN1-202ENST00000547263 MRPL10Q7Z7H8 261 aaKnown RBP12.13□□□□□ -0.47
GCN1-202ENST00000547263 CABP7Q86V35 215 aa12.13□□□□□ -0.47
GCN1-202ENST00000547263 MYLIPQ8WY64 445 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms