RNA–Protein interactions for RNA: ENST00000546588.1

VPS29-203, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-203ENST00000546588 BTBD19C9JJ37 291 aa9.43□□□□□ -0.9
VPS29-203ENST00000546588 POLR2DO15514 142 aaKnown RBP9.43□□□□□ -0.9
VPS29-203ENST00000546588 CPNE3O75131 537 aaKnown RBP9.43□□□□□ -0.9
VPS29-203ENST00000546588 CCDC192P0DO97 292 aa9.43□□□□□ -0.9
VPS29-203ENST00000546588 ITGB5P18084 799 aa9.43□□□□□ -0.9
VPS29-203ENST00000546588 ATP2B1P20020 1258 aa9.43□□□□□ -0.9
VPS29-203ENST00000546588 ICAM3P32942 547 aa9.43□□□□□ -0.9
VPS29-203ENST00000546588 IRX3P78415 501 aaPredicted RBP9.43□□□□□ -0.9
VPS29-203ENST00000546588 TYRO3Q06418 890 aa9.43□□□□□ -0.9
VPS29-203ENST00000546588 FAM110CQ1W6H9 321 aa9.43□□□□□ -0.9
VPS29-203ENST00000546588 XP32Q5T750 250 aa9.43□□□□□ -0.9
VPS29-203ENST00000546588 GADL1Q6ZQY3 521 aa9.43□□□□□ -0.9
VPS29-203ENST00000546588 VSIG10LQ86VR7 867 aa9.43□□□□□ -0.9
VPS29-203ENST00000546588 SMC1BQ8NDV3 1235 aa9.43□□□□□ -0.9
VPS29-203ENST00000546588 NEK9Q8TD19 979 aa9.43□□□□□ -0.9
VPS29-203ENST00000546588 LRRC15Q8TF66 581 aa9.43□□□□□ -0.9
VPS29-203ENST00000546588 GPRASP2Q96D09 838 aa9.43□□□□□ -0.9
VPS29-203ENST00000546588 CCDC34Q96HJ3 373 aa9.43□□□□□ -0.9
VPS29-203ENST00000546588 GSDMAQ96QA5 445 aa9.43□□□□□ -0.9
VPS29-203ENST00000546588 POLR3CQ9BUI4 534 aaPredicted RBP9.43□□□□□ -0.9
VPS29-203ENST00000546588 MOV10L1Q9BXT6 1211 aaKnown RBP9.43□□□□□ -0.9
VPS29-203ENST00000546588 WDR11Q9BZH6 1224 aa9.43□□□□□ -0.9
VPS29-203ENST00000546588 MROH8Q9H579 483 aa9.43□□□□□ -0.9
VPS29-203ENST00000546588 CAPN10Q9HC96 672 aa9.43□□□□□ -0.9
VPS29-203ENST00000546588 TXNRD2Q9NNW7 524 aa9.43□□□□□ -0.9
VPS29-203ENST00000546588 JADE2Q9NQC1 790 aa9.43□□□□□ -0.9
VPS29-203ENST00000546588 HOOK1Q9UJC3 728 aaKnown RBP9.43□□□□□ -0.9
VPS29-203ENST00000546588 PCDHA12Q9UN75 941 aa9.43□□□□□ -0.9
VPS29-203ENST00000546588 NFASCO94856 1347 aa9.42□□□□□ -0.9
VPS29-203ENST00000546588 MANSC4A6NHS7 340 aaPredicted RBP9.42□□□□□ -0.9
VPS29-203ENST00000546588 DHX15O43143 795 aaKnown RBP9.42□□□□□ -0.9
VPS29-203ENST00000546588 EIF4BP23588 611 aaKnown RBP9.42□□□□□ -0.9
VPS29-203ENST00000546588 RPA1P27694 616 aa9.42□□□□□ -0.9
VPS29-203ENST00000546588 TECP42680 631 aa9.42□□□□□ -0.9
VPS29-203ENST00000546588 MRE11P49959 708 aa9.42□□□□□ -0.9
VPS29-203ENST00000546588 INHBEP58166 350 aa9.42□□□□□ -0.9
VPS29-203ENST00000546588 ERVK-24P63145 666 aa9.42□□□□□ -0.9
VPS29-203ENST00000546588 FSTL1Q12841 308 aa9.42□□□□□ -0.9
VPS29-203ENST00000546588 GRB10Q13322 594 aa9.42□□□□□ -0.9
VPS29-203ENST00000546588 POSTNQ15063 836 aa9.42□□□□□ -0.9
VPS29-203ENST00000546588 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.42□□□□□ -0.9
VPS29-203ENST00000546588 COBLL1Q53SF7 1204 aa9.42□□□□□ -0.9
VPS29-203ENST00000546588 SPECC1Q5M775 1068 aa9.42□□□□□ -0.9
VPS29-203ENST00000546588 HAUS3Q68CZ6 603 aa9.42□□□□□ -0.9
VPS29-203ENST00000546588 OTOP1Q7RTM1 612 aa9.42□□□□□ -0.9
VPS29-203ENST00000546588 CABP7Q86V35 215 aa9.42□□□□□ -0.9
VPS29-203ENST00000546588 CPXCR1Q8N123 301 aa9.42□□□□□ -0.9
VPS29-203ENST00000546588 CNNM3Q8NE01 707 aa9.42□□□□□ -0.9
VPS29-203ENST00000546588 IL31RAQ8NI17 732 aa9.42□□□□□ -0.9
VPS29-203ENST00000546588 NSUN6Q8TEA1 469 aaKnown RBP9.42□□□□□ -0.9
VPS29-203ENST00000546588 UBXN4Q92575 508 aa9.42□□□□□ -0.9
VPS29-203ENST00000546588 TRIM44Q96DX7 344 aaPredicted RBP9.42□□□□□ -0.9
VPS29-203ENST00000546588 FGD4Q96M96 766 aa9.42□□□□□ -0.9
VPS29-203ENST00000546588 GAS2L1Q99501 681 aaPredicted RBP9.42□□□□□ -0.9
VPS29-203ENST00000546588 PTPN18Q99952 460 aa9.42□□□□□ -0.9
VPS29-203ENST00000546588 SENP7Q9BQF6 1050 aa9.42□□□□□ -0.9
VPS29-203ENST00000546588 NT5C3AQ9H0P0 336 aa9.42□□□□□ -0.9
VPS29-203ENST00000546588 DNAJC25Q9H1X3 360 aa9.42□□□□□ -0.9
VPS29-203ENST00000546588 TSPY26PQ9H489 355 aa9.42□□□□□ -0.9
VPS29-203ENST00000546588 BLOC1S4Q9NUP1 217 aa9.42□□□□□ -0.9
VPS29-203ENST00000546588 LRWD1Q9UFC0 647 aa9.42□□□□□ -0.9
VPS29-203ENST00000546588 CCDC39Q9UFE4 941 aa9.42□□□□□ -0.9
VPS29-203ENST00000546588 FOXD3Q9UJU5 478 aaPredicted RBP9.42□□□□□ -0.9
VPS29-203ENST00000546588 AK5Q9Y6K8 562 aa9.42□□□□□ -0.9
VPS29-203ENST00000546588 FRMPD3Q5JV73 1810 aa9.41□□□□□ -0.9
VPS29-203ENST00000546588 CCL15-CCL14A0A0B4J2E2 113 aa9.41□□□□□ -0.9
VPS29-203ENST00000546588 GOLGA6L3A6NEY3 463 aa9.41□□□□□ -0.9
VPS29-203ENST00000546588 PDHXO00330 501 aa9.41□□□□□ -0.9
VPS29-203ENST00000546588 TOMM70O94826 608 aa9.41□□□□□ -0.9
VPS29-203ENST00000546588 LYPLA2O95372 231 aa9.41□□□□□ -0.9
VPS29-203ENST00000546588 PLCG1P19174 1290 aa9.41□□□□□ -0.9
VPS29-203ENST00000546588 MX2P20592 715 aa9.41□□□□□ -0.9
VPS29-203ENST00000546588 UBA7P41226 1012 aa9.41□□□□□ -0.9
VPS29-203ENST00000546588 HUNKP57058 714 aa9.41□□□□□ -0.9
VPS29-203ENST00000546588 BAATQ14032 418 aaPredicted RBP9.41□□□□□ -0.9
VPS29-203ENST00000546588 KCNB1Q14721 858 aa9.41□□□□□ -0.9
VPS29-203ENST00000546588 STX1AQ16623 288 aa9.41□□□□□ -0.9
VPS29-203ENST00000546588 CCL15Q16663 113 aa9.41□□□□□ -0.9
VPS29-203ENST00000546588 UVSSAQ2YD98 709 aa9.41□□□□□ -0.9
VPS29-203ENST00000546588 PRR16Q569H4 304 aa9.41□□□□□ -0.9
VPS29-203ENST00000546588 ARSJQ5FYB0 599 aaPredicted RBP9.41□□□□□ -0.9
VPS29-203ENST00000546588 RGMBQ6NW40 437 aa9.41□□□□□ -0.9
VPS29-203ENST00000546588 ZNF438Q7Z4V0 828 aa9.41□□□□□ -0.9
VPS29-203ENST00000546588 FCHSD1Q86WN1 690 aa9.41□□□□□ -0.9
VPS29-203ENST00000546588 RDM1Q8NG50 284 aa9.41□□□□□ -0.9
VPS29-203ENST00000546588 CYP2W1Q8TAV3 490 aa9.41□□□□□ -0.9
VPS29-203ENST00000546588 PAGE5Q96GU1 130 aa9.41□□□□□ -0.9
VPS29-203ENST00000546588 CRELD1Q96HD1 420 aa9.41□□□□□ -0.9
VPS29-203ENST00000546588 CDHR1Q96JP9 859 aa9.41□□□□□ -0.9
VPS29-203ENST00000546588 PNMA5Q96PV4 448 aa9.41□□□□□ -0.9
VPS29-203ENST00000546588 TAAR1Q96RJ0 339 aa9.41□□□□□ -0.9
VPS29-203ENST00000546588 RMDN3Q96TC7 470 aa9.41□□□□□ -0.9
VPS29-203ENST00000546588 PARK7Q99497 189 aaKnown RBP9.41□□□□□ -0.9
VPS29-203ENST00000546588 HSD17B14Q9BPX1 270 aa9.41□□□□□ -0.9
VPS29-203ENST00000546588 GTPBP4Q9BZE4 634 aaKnown RBP9.41□□□□□ -0.9
VPS29-203ENST00000546588 GRPEL1Q9HAV7 217 aa9.41□□□□□ -0.9
VPS29-203ENST00000546588 AGO4Q9HCK5 861 aaKnown RBP9.41□□□□□ -0.9
VPS29-203ENST00000546588 TUFT1Q9NNX1 390 aa9.41□□□□□ -0.9
VPS29-203ENST00000546588 KCNH7Q9NS40 1196 aa9.41□□□□□ -0.9
VPS29-203ENST00000546588 ZDHHC3Q9NYG2 299 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms