RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 MKNK2Q9HBH9 465 aa8.51□□□□□ -1.05
UBR1-202ENST00000546274 TMCO1Q9UM00 188 aa8.51□□□□□ -1.05
UBR1-202ENST00000546274 BARX2Q9UMQ3 279 aaPredicted RBP8.51□□□□□ -1.05
UBR1-202ENST00000546274 SNX12Q9UMY4 172 aa8.51□□□□□ -1.05
UBR1-202ENST00000546274 ZNF711Q9Y462 761 aa8.51□□□□□ -1.05
UBR1-202ENST00000546274 PDLIM1O00151 329 aa8.5□□□□□ -1.05
UBR1-202ENST00000546274 GNA14O95837 355 aa8.5□□□□□ -1.05
UBR1-202ENST00000546274 RARAP10276 462 aa8.5□□□□□ -1.05
UBR1-202ENST00000546274 PSMC4P43686 418 aa8.5□□□□□ -1.05
UBR1-202ENST00000546274 DHX9Q08211 1270 aaKnown RBP8.5□□□□□ -1.05
UBR1-202ENST00000546274 RCN2Q14257 317 aa8.5□□□□□ -1.05
UBR1-202ENST00000546274 NONOQ15233 471 aaKnown RBP eCLIP8.5□□□□□ -1.05
UBR1-202ENST00000546274 TSNAXIP1Q2TAA8 658 aa8.5□□□□□ -1.05
UBR1-202ENST00000546274 NEK8Q86SG6 692 aa8.5□□□□□ -1.05
UBR1-202ENST00000546274 ATP11CQ8NB49 1132 aa8.5□□□□□ -1.05
UBR1-202ENST00000546274 SMC1BQ8NDV3 1235 aa8.5□□□□□ -1.05
UBR1-202ENST00000546274 WDR66Q8TBY9 1149 aa8.5□□□□□ -1.05
UBR1-202ENST00000546274 DNAJC9Q8WXX5 260 aa8.5□□□□□ -1.05
UBR1-202ENST00000546274 PNMA5Q96PV4 448 aa8.5□□□□□ -1.05
UBR1-202ENST00000546274 MTMR9Q96QG7 549 aa8.5□□□□□ -1.05
UBR1-202ENST00000546274 XPO6Q96QU8 1125 aaKnown RBP8.5□□□□□ -1.05
UBR1-202ENST00000546274 DDX50Q9BQ39 737 aaKnown RBP8.5□□□□□ -1.05
UBR1-202ENST00000546274 RTFDC1Q9BY42 306 aaPredicted RBP8.5□□□□□ -1.05
UBR1-202ENST00000546274 ETNK2Q9NVF9 386 aa8.5□□□□□ -1.05
UBR1-202ENST00000546274 SALL4Q9UJQ4 1053 aa8.5□□□□□ -1.05
UBR1-202ENST00000546274 STX8Q9UNK0 236 aa8.5□□□□□ -1.05
UBR1-202ENST00000546274 SMCO2A6NFE2 343 aa8.5□□□□□ -1.05
UBR1-202ENST00000546274 TMEM221A6NGB7 291 aa8.5□□□□□ -1.05
UBR1-202ENST00000546274 MYMKA6NI61 221 aa8.5□□□□□ -1.05
UBR1-202ENST00000546274 NDUFB5O43674 189 aa8.5□□□□□ -1.05
UBR1-202ENST00000546274 LDHBP07195 334 aaKnown RBP8.5□□□□□ -1.05
UBR1-202ENST00000546274 MTIF2P46199 727 aaKnown RBP8.5□□□□□ -1.05
UBR1-202ENST00000546274 CACNA2D1P54289 1103 aa8.5□□□□□ -1.05
UBR1-202ENST00000546274 NAPAP54920 295 aa8.5□□□□□ -1.05
UBR1-202ENST00000546274 PPP4CP60510 307 aa8.5□□□□□ -1.05
UBR1-202ENST00000546274 EHHADHQ08426 723 aa8.5□□□□□ -1.05
UBR1-202ENST00000546274 SPTY2D1Q68D10 685 aaPredicted RBP8.5□□□□□ -1.05
UBR1-202ENST00000546274 NCCRP1Q6ZVX7 275 aaPredicted RBP8.5□□□□□ -1.05
UBR1-202ENST00000546274 KRT25Q7Z3Z0 450 aa8.5□□□□□ -1.05
UBR1-202ENST00000546274 C14orf80Q86SX3 495 aa8.5□□□□□ -1.05
UBR1-202ENST00000546274 TRIM50Q86XT4 487 aa8.5□□□□□ -1.05
UBR1-202ENST00000546274 LRRC34Q8IZ02 419 aa8.5□□□□□ -1.05
UBR1-202ENST00000546274 ZBTB8BQ8NAP8 495 aaPredicted RBP8.5□□□□□ -1.05
UBR1-202ENST00000546274 MLXIPQ9HAP2 919 aa8.5□□□□□ -1.05
UBR1-202ENST00000546274 TMEM260Q9NX78 707 aa8.5□□□□□ -1.05
UBR1-202ENST00000546274 SAP30BPQ9UHR5 308 aaKnown RBP8.5□□□□□ -1.05
UBR1-202ENST00000546274 LRRC42Q9Y546 428 aa8.5□□□□□ -1.05
UBR1-202ENST00000546274 TRIM43BA6NCK2 446 aa8.49□□□□□ -1.05
UBR1-202ENST00000546274 KCNA3P22001 575 aa8.49□□□□□ -1.05
UBR1-202ENST00000546274 NOVP48745 357 aa8.49□□□□□ -1.05
UBR1-202ENST00000546274 PEX5P50542 639 aa8.49□□□□□ -1.05
UBR1-202ENST00000546274 PLOD1Q02809 727 aaPredicted RBP8.49□□□□□ -1.05
UBR1-202ENST00000546274 BTG3Q14201 252 aaPredicted RBP8.49□□□□□ -1.05
UBR1-202ENST00000546274 ASTE1Q2TB18 679 aaPredicted RBP8.49□□□□□ -1.05
UBR1-202ENST00000546274 KRT71Q3SY84 523 aa8.49□□□□□ -1.05
UBR1-202ENST00000546274 VWA3BQ502W6 1294 aa8.49□□□□□ -1.05
UBR1-202ENST00000546274 USP17L2Q6R6M4 530 aa8.49□□□□□ -1.05
UBR1-202ENST00000546274 MAPKAPK5Q8IW41 473 aa8.49□□□□□ -1.05
UBR1-202ENST00000546274 TBCKQ8TEA7 893 aa8.49□□□□□ -1.05
UBR1-202ENST00000546274 BAP1Q92560 729 aa8.49□□□□□ -1.05
UBR1-202ENST00000546274 TRAIPQ9BWF2 469 aa8.49□□□□□ -1.05
UBR1-202ENST00000546274 NARFQ9UHQ1 456 aa8.49□□□□□ -1.05
UBR1-202ENST00000546274 PNMA3Q9UL41 463 aa8.49□□□□□ -1.05
UBR1-202ENST00000546274 PCDHA13Q9Y5I0 950 aa8.49□□□□□ -1.05
UBR1-202ENST00000546274 SLC37A4O43826 429 aa8.49□□□□□ -1.05
UBR1-202ENST00000546274 VCAM1P19320 739 aa8.49□□□□□ -1.05
UBR1-202ENST00000546274 CLCN2P51788 898 aa8.49□□□□□ -1.05
UBR1-202ENST00000546274 KIF11P52732 1056 aa8.49□□□□□ -1.05
UBR1-202ENST00000546274 KIF5AQ12840 1032 aa8.49□□□□□ -1.05
UBR1-202ENST00000546274 ZC2HC1CQ53FD0 456 aaPredicted RBP8.49□□□□□ -1.05
UBR1-202ENST00000546274 CNNM4Q6P4Q7 775 aa8.49□□□□□ -1.05
UBR1-202ENST00000546274 LRRC55Q6ZSA7 311 aa8.49□□□□□ -1.05
UBR1-202ENST00000546274 C16orf86Q6ZW13 317 aa8.49□□□□□ -1.05
UBR1-202ENST00000546274 APBB1IPQ7Z5R6 666 aaPredicted RBP8.49□□□□□ -1.05
UBR1-202ENST00000546274 CD302Q8IX05 232 aa8.49□□□□□ -1.05
UBR1-202ENST00000546274 GBP7Q8N8V2 638 aaPredicted RBP8.49□□□□□ -1.05
UBR1-202ENST00000546274 GLIS3Q8NEA6 775 aa8.49□□□□□ -1.05
UBR1-202ENST00000546274 NYXQ9GZU5 481 aa8.49□□□□□ -1.05
UBR1-202ENST00000546274 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.49□□□□□ -1.05
UBR1-202ENST00000546274 STK32BQ9NY57 414 aa8.49□□□□□ -1.05
UBR1-202ENST00000546274 ZNF180Q9UJW8 692 aa8.49□□□□□ -1.05
UBR1-202ENST00000546274 WDR37Q9Y2I8 494 aa8.49□□□□□ -1.05
UBR1-202ENST00000546274 MYH4Q9Y623 1939 aa8.49□□□□□ -1.05
UBR1-202ENST00000546274 ABLIM1O14639 778 aa8.49□□□□□ -1.05
UBR1-202ENST00000546274 MOCS3O95396 460 aa8.49□□□□□ -1.05
UBR1-202ENST00000546274 MMEP08473 750 aa8.49□□□□□ -1.05
UBR1-202ENST00000546274 ZCCHC18P0CG32 403 aa8.49□□□□□ -1.05
UBR1-202ENST00000546274 HSD17B3P37058 310 aa8.49□□□□□ -1.05
UBR1-202ENST00000546274 IGBP1P78318 339 aa8.49□□□□□ -1.05
UBR1-202ENST00000546274 ITIH3Q06033 890 aa8.49□□□□□ -1.05
UBR1-202ENST00000546274 NFIXQ14938 502 aa8.49□□□□□ -1.05
UBR1-202ENST00000546274 CACNA2D4Q7Z3S7 1137 aa8.49□□□□□ -1.05
UBR1-202ENST00000546274 EXOC3L1Q86VI1 746 aa8.49□□□□□ -1.05
UBR1-202ENST00000546274 ZC3H18Q86VM9 953 aaKnown RBP8.49□□□□□ -1.05
UBR1-202ENST00000546274 C2CD5Q86YS7 1000 aa8.49□□□□□ -1.05
UBR1-202ENST00000546274 APLFQ8IW19 511 aaPredicted RBP8.49□□□□□ -1.05
UBR1-202ENST00000546274 ZNF444Q8N0Y2 327 aaPredicted RBP8.49□□□□□ -1.05
UBR1-202ENST00000546274 ANKRD13CQ8N6S4 541 aa8.49□□□□□ -1.05
UBR1-202ENST00000546274 CASKIN2Q8WXE0 1202 aa8.49□□□□□ -1.05
UBR1-202ENST00000546274 CCDC42Q96M95 316 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms