RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 ZSCAN30Q86W11 494 aa21.35■■□□□ 1.01
SKP2-208ENST00000546211 ZNF830Q96NB3 372 aaPredicted RBP21.35■■□□□ 1.01
SKP2-208ENST00000546211 AGPAT3Q9NRZ7 376 aa21.35■■□□□ 1.01
SKP2-208ENST00000546211 GABRQQ9UN88 632 aa21.35■■□□□ 1.01
SKP2-208ENST00000546211 ITIH6Q6UXX5 1313 aa21.34■■□□□ 1.01
SKP2-208ENST00000546211 SLC16A3O15427 465 aaKnown RBP21.34■■□□□ 1.01
SKP2-208ENST00000546211 TRPA1O75762 1119 aa21.34■■□□□ 1.01
SKP2-208ENST00000546211 ZNF286BP0CG31 522 aa21.34■■□□□ 1.01
SKP2-208ENST00000546211 NAMPTP43490 491 aa21.34■■□□□ 1.01
SKP2-208ENST00000546211 VEGFBP49765 207 aa21.34■■□□□ 1.01
SKP2-208ENST00000546211 VWA3BQ502W6 1294 aa21.34■■□□□ 1.01
SKP2-208ENST00000546211 IER5Q5VY09 327 aa21.34■■□□□ 1.01
SKP2-208ENST00000546211 C16orf70Q9BSU1 422 aa21.34■■□□□ 1.01
SKP2-208ENST00000546211 KIFC3Q9BVG8 833 aa21.34■■□□□ 1.01
SKP2-208ENST00000546211 RNPEPQ9H4A4 650 aa21.34■■□□□ 1.01
SKP2-208ENST00000546211 RNF186Q9NXI6 227 aa21.34■■□□□ 1.01
SKP2-208ENST00000546211 TBX20Q9UMR3 447 aa21.34■■□□□ 1.01
SKP2-208ENST00000546211 ZKSCAN5Q9Y2L8 839 aa21.34■■□□□ 1.01
SKP2-208ENST00000546211 Q9Y3F1 56 aa21.34■■□□□ 1.01
SKP2-208ENST00000546211 A0A1W2PQC6 194 aa21.33■■□□□ 1.01
SKP2-208ENST00000546211 ZBTB42B2RXF5 422 aa21.33■■□□□ 1.01
SKP2-208ENST00000546211 H3BRB1 525 aa21.33■■□□□ 1.01
SKP2-208ENST00000546211 EPB41P11171 864 aaKnown RBP21.33■■□□□ 1.01
SKP2-208ENST00000546211 GLRA2P23416 452 aa21.33■■□□□ 1.01
SKP2-208ENST00000546211 MYBPC2Q14324 1141 aa21.33■■□□□ 1.01
SKP2-208ENST00000546211 MIIPQ5JXC2 388 aa21.33■■□□□ 1.01
SKP2-208ENST00000546211 CEP135Q66GS9 1140 aa21.33■■□□□ 1.01
SKP2-208ENST00000546211 FRMD5Q7Z6J6 570 aa21.33■■□□□ 1.01
SKP2-208ENST00000546211 MAP4K3Q8IVH8 894 aa21.33■■□□□ 1.01
SKP2-208ENST00000546211 ASAP3Q8TDY4 903 aa21.33■■□□□ 1.01
SKP2-208ENST00000546211 AP5M1Q9H0R1 490 aa21.33■■□□□ 1.01
SKP2-208ENST00000546211 IKZF4Q9H2S9 585 aa21.33■■□□□ 1.01
SKP2-208ENST00000546211 NDST4Q9H3R1 872 aa21.33■■□□□ 1.01
SKP2-208ENST00000546211 TUT1Q9H6E5 874 aaKnown RBP21.33■■□□□ 1.01
SKP2-208ENST00000546211 METTL14Q9HCE5 456 aaKnown RBP21.33■■□□□ 1.01
SKP2-208ENST00000546211 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.33■■□□□ 1.01
SKP2-208ENST00000546211 IGKV6-21A0A0C4DH24 114 aa21.32■■□□□ 1
SKP2-208ENST00000546211 A6NJR5 290 aa21.32■■□□□ 1
SKP2-208ENST00000546211 AKR1A1P14550 325 aa21.32■■□□□ 1
SKP2-208ENST00000546211 SFPQP23246 707 aaKnown RBP eCLIP21.32■■□□□ 1
SKP2-208ENST00000546211 PRKCZQ05513 592 aa21.32■■□□□ 1
SKP2-208ENST00000546211 TBX2Q13207 712 aaPredicted RBP21.32■■□□□ 1
SKP2-208ENST00000546211 BRDTQ58F21 947 aaPredicted RBP21.32■■□□□ 1
SKP2-208ENST00000546211 PPFIBP1Q86W92 1011 aa21.32■■□□□ 1
SKP2-208ENST00000546211 LRRC8AQ8IWT6 810 aa21.32■■□□□ 1
SKP2-208ENST00000546211 DEPTORQ8TB45 409 aa21.32■■□□□ 1
SKP2-208ENST00000546211 SUGCTQ9HAC7 445 aa21.32■■□□□ 1
SKP2-208ENST00000546211 ARHGAP28Q9P2N2 729 aa21.32■■□□□ 1
SKP2-208ENST00000546211 ARMCX3Q9UH62 379 aaPredicted RBP21.32■■□□□ 1
SKP2-208ENST00000546211 COL1A2P08123 1366 aa21.32■■□□□ 1
SKP2-208ENST00000546211 ZSWIM8A7E2V4 1837 aa21.32■■□□□ 1
SKP2-208ENST00000546211 LRRIQ4A6NIV6 560 aa21.31■■□□□ 1
SKP2-208ENST00000546211 TPM1P09493 284 aa21.31■■□□□ 1
SKP2-208ENST00000546211 INSRRP14616 1297 aa21.31■■□□□ 1
SKP2-208ENST00000546211 MSNP26038 577 aaKnown RBP21.31■■□□□ 1
SKP2-208ENST00000546211 CPT1AP50416 773 aa21.31■■□□□ 1
SKP2-208ENST00000546211 SLC9A9Q8IVB4 645 aa21.31■■□□□ 1
SKP2-208ENST00000546211 TRIM59Q8IWR1 403 aa21.31■■□□□ 1
SKP2-208ENST00000546211 RETREG2Q8NC44 543 aa21.31■■□□□ 1
SKP2-208ENST00000546211 CACTINQ8WUQ7 758 aaKnown RBP21.31■■□□□ 1
SKP2-208ENST00000546211 PSPC1Q8WXF1 523 aaKnown RBP21.31■■□□□ 1
SKP2-208ENST00000546211 TRIB2Q92519 343 aa21.31■■□□□ 1
SKP2-208ENST00000546211 MKNK1Q9BUB5 465 aa21.31■■□□□ 1
SKP2-208ENST00000546211 KCNF1Q9H3M0 494 aa21.31■■□□□ 1
SKP2-208ENST00000546211 DMAC2Q9NW81 257 aa21.31■■□□□ 1
SKP2-208ENST00000546211 FRMD4BQ9Y2L6 1034 aa21.31■■□□□ 1
SKP2-208ENST00000546211 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.31■■□□□ 1
SKP2-208ENST00000546211 ADGRA3Q8IWK6 1321 aa21.31■■□□□ 1
SKP2-208ENST00000546211 ESPNB1AK53 854 aa21.31■■□□□ 1
SKP2-208ENST00000546211 AKAP3O75969 853 aa21.31■■□□□ 1
SKP2-208ENST00000546211 PSMC2P35998 433 aaKnown RBP21.31■■□□□ 1
SKP2-208ENST00000546211 CYP2J2P51589 502 aa21.31■■□□□ 1
SKP2-208ENST00000546211 PPP2R3AQ06190 1150 aa21.31■■□□□ 1
SKP2-208ENST00000546211 TRIM14Q14142 442 aa21.31■■□□□ 1
SKP2-208ENST00000546211 MXD4Q14582 209 aaPredicted RBP21.31■■□□□ 1
SKP2-208ENST00000546211 ARID5BQ14865 1188 aa21.31■■□□□ 1
SKP2-208ENST00000546211 C12orf56Q8IXR9 622 aa21.31■■□□□ 1
SKP2-208ENST00000546211 TRAPPC12Q8WVT3 735 aa21.31■■□□□ 1
SKP2-208ENST00000546211 NRDCO43847 1150 aa21.3■■□□□ 1
SKP2-208ENST00000546211 HOXD10P28358 340 aa21.3■■□□□ 1
SKP2-208ENST00000546211 IGBP1P78318 339 aa21.3■■□□□ 1
SKP2-208ENST00000546211 STRN3Q13033 797 aa21.3■■□□□ 1
SKP2-208ENST00000546211 ARMCX5Q6P1M9 558 aa21.3■■□□□ 1
SKP2-208ENST00000546211 FAM186BQ8IYM0 893 aa21.3■■□□□ 1
SKP2-208ENST00000546211 LRRC71Q8N4P6 559 aa21.3■■□□□ 1
SKP2-208ENST00000546211 TMEM174Q8WUU8 243 aa21.3■■□□□ 1
SKP2-208ENST00000546211 PRPF31Q8WWY3 499 aaKnown RBP21.3■■□□□ 1
SKP2-208ENST00000546211 KCNN1Q92952 543 aa21.3■■□□□ 1
SKP2-208ENST00000546211 LENG1Q96BZ8 264 aaPredicted RBP21.3■■□□□ 1
SKP2-208ENST00000546211 MAGEB2O15479 319 aa21.29■■□□□ 1
SKP2-208ENST00000546211 EXOC3O60645 756 aa21.29■■□□□ 1
SKP2-208ENST00000546211 C22orf31O95567 290 aa21.29■■□□□ 1
SKP2-208ENST00000546211 CASP4P49662 377 aa21.29■■□□□ 1
SKP2-208ENST00000546211 LRMPQ12912 555 aa21.29■■□□□ 1
SKP2-208ENST00000546211 CAPSQ13938 189 aa21.29■■□□□ 1
SKP2-208ENST00000546211 EFCAB12Q6NXP0 572 aa21.29■■□□□ 1
SKP2-208ENST00000546211 ERGIC2Q96RQ1 377 aa21.29■■□□□ 1
SKP2-208ENST00000546211 SUCLA2Q9P2R7 463 aaPredicted RBP21.29■■□□□ 1
SKP2-208ENST00000546211 CYBAP13498 195 aa21.28■■□□□ 1
SKP2-208ENST00000546211 PPFIA1Q13136 1202 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms