RNA–Protein interactions for RNA: ENST00000545445.1

LTBR-214, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 379 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-214ENST00000545445 CXCL10P02778 98 aa13.17□□□□□ -0.3
LTBR-214ENST00000545445 RPLP2P05387 115 aaKnown RBP13.17□□□□□ -0.3
LTBR-214ENST00000545445 SMIM10L2AP0DMW4 78 aa13.17□□□□□ -0.3
LTBR-214ENST00000545445 SMIM10L2BP0DMW5 78 aa13.17□□□□□ -0.3
LTBR-214ENST00000545445 INSRRP14616 1297 aa13.17□□□□□ -0.3
LTBR-214ENST00000545445 PFKFB1P16118 471 aa13.17□□□□□ -0.3
LTBR-214ENST00000545445 PLCG1P19174 1290 aa13.17□□□□□ -0.3
LTBR-214ENST00000545445 HOXC8P31273 242 aa13.17□□□□□ -0.3
LTBR-214ENST00000545445 ECM1Q16610 540 aa13.17□□□□□ -0.3
LTBR-214ENST00000545445 PUS10Q3MIT2 529 aaKnown RBP13.17□□□□□ -0.3
LTBR-214ENST00000545445 EP400NLQ6ZTU2 488 aa13.17□□□□□ -0.3
LTBR-214ENST00000545445 FSIP1Q8NA03 581 aa13.17□□□□□ -0.3
LTBR-214ENST00000545445 MRPL38Q96DV4 380 aaKnown RBP13.17□□□□□ -0.3
LTBR-214ENST00000545445 CCDC34Q96HJ3 373 aa13.17□□□□□ -0.3
LTBR-214ENST00000545445 CEP170P1Q96L14 293 aa13.17□□□□□ -0.3
LTBR-214ENST00000545445 CYP26B1Q9NR63 512 aa13.17□□□□□ -0.3
LTBR-214ENST00000545445 KCND2Q9NZV8 630 aa13.17□□□□□ -0.3
LTBR-214ENST00000545445 GTF2IRD1Q9UHL9 959 aa13.17□□□□□ -0.3
LTBR-214ENST00000545445 HPSEQ9Y251 543 aa13.17□□□□□ -0.3
LTBR-214ENST00000545445 A0A1B0GVL5 298 aa13.16□□□□□ -0.3
LTBR-214ENST00000545445 ABHD14A-ACY1A0A1B0GW23 586 aa13.16□□□□□ -0.3
LTBR-214ENST00000545445 C17orf102A2RUQ5 167 aa13.16□□□□□ -0.3
LTBR-214ENST00000545445 ARHGEF35A5YM69 484 aa13.16□□□□□ -0.3
LTBR-214ENST00000545445 POLR2DO15514 142 aaKnown RBP13.16□□□□□ -0.3
LTBR-214ENST00000545445 GAS2O43903 313 aaKnown RBP13.16□□□□□ -0.3
LTBR-214ENST00000545445 DGAT1O75907 488 aa13.16□□□□□ -0.3
LTBR-214ENST00000545445 CKBP12277 381 aa13.16□□□□□ -0.3
LTBR-214ENST00000545445 PTMSP20962 102 aa13.16□□□□□ -0.3
LTBR-214ENST00000545445 RFC5P40937 340 aa13.16□□□□□ -0.3
LTBR-214ENST00000545445 STAT6P42226 847 aa13.16□□□□□ -0.3
LTBR-214ENST00000545445 SYKP43405 635 aa13.16□□□□□ -0.3
LTBR-214ENST00000545445 RARRES1P49788 294 aa13.16□□□□□ -0.3
LTBR-214ENST00000545445 TARBP2Q15633 366 aaKnown RBP13.16□□□□□ -0.3
LTBR-214ENST00000545445 GRIK4Q16099 956 aa13.16□□□□□ -0.3
LTBR-214ENST00000545445 TIGD5Q53EQ6 642 aa13.16□□□□□ -0.3
LTBR-214ENST00000545445 XKR9Q5GH70 373 aa13.16□□□□□ -0.3
LTBR-214ENST00000545445 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.16□□□□□ -0.3
LTBR-214ENST00000545445 PIGOQ8TEQ8 1089 aa13.16□□□□□ -0.3
LTBR-214ENST00000545445 LRRC27Q9C0I9 530 aa13.16□□□□□ -0.3
LTBR-214ENST00000545445 HDAC6Q9UBN7 1215 aa13.16□□□□□ -0.3
LTBR-214ENST00000545445 SIP14410 1827 aa13.16□□□□□ -0.3
LTBR-214ENST00000545445 MYH9P35579 1960 aaKnown RBP13.15□□□□□ -0.3
LTBR-214ENST00000545445 MBLAC1A4D2B0 266 aaPredicted RBP13.15□□□□□ -0.3
LTBR-214ENST00000545445 ZBTB42B2RXF5 422 aa13.15□□□□□ -0.3
LTBR-214ENST00000545445 E9PMD0 336 aa13.15□□□□□ -0.3
LTBR-214ENST00000545445 SLFN14P0C7P3 912 aa13.15□□□□□ -0.3
LTBR-214ENST00000545445 PLA2G4BP0C869 781 aa13.15□□□□□ -0.3
LTBR-214ENST00000545445 NDUFA8P51970 172 aa13.15□□□□□ -0.3
LTBR-214ENST00000545445 ADAM17P78536 824 aa13.15□□□□□ -0.3
LTBR-214ENST00000545445 AMPD3Q01432 767 aa13.15□□□□□ -0.3
LTBR-214ENST00000545445 FAM160A1Q05DH4 1040 aa13.15□□□□□ -0.3
LTBR-214ENST00000545445 RBL2Q08999 1139 aa13.15□□□□□ -0.3
LTBR-214ENST00000545445 TBC1D8BQ0IIM8 1120 aa13.15□□□□□ -0.3
LTBR-214ENST00000545445 IKBKEQ14164 716 aa13.15□□□□□ -0.3
LTBR-214ENST00000545445 PTPROQ16827 1216 aa13.15□□□□□ -0.3
LTBR-214ENST00000545445 MTERF2Q49AM1 385 aa13.15□□□□□ -0.3
LTBR-214ENST00000545445 TCEAL5Q5H9L2 206 aa13.15□□□□□ -0.3
LTBR-214ENST00000545445 TAF2Q6P1X5 1199 aa13.15□□□□□ -0.3
LTBR-214ENST00000545445 SV2BQ7L1I2 683 aa13.15□□□□□ -0.3
LTBR-214ENST00000545445 TRMT1LQ7Z2T5 733 aaKnown RBP13.15□□□□□ -0.3
LTBR-214ENST00000545445 CEP57L1Q8IYX8 460 aa13.15□□□□□ -0.3
LTBR-214ENST00000545445 ZNF710Q8N1W2 664 aa13.15□□□□□ -0.3
LTBR-214ENST00000545445 PDILTQ8N807 584 aa13.15□□□□□ -0.3
LTBR-214ENST00000545445 SYT2Q8N9I0 419 aaPredicted RBP13.15□□□□□ -0.3
LTBR-214ENST00000545445 LMBR1Q8WVP7 490 aa13.15□□□□□ -0.3
LTBR-214ENST00000545445 SLC7A3Q8WY07 619 aa13.15□□□□□ -0.3
LTBR-214ENST00000545445 LARP4BQ92615 738 aaKnown RBP13.15□□□□□ -0.3
LTBR-214ENST00000545445 RAD54LQ92698 747 aa13.15□□□□□ -0.3
LTBR-214ENST00000545445 WNT8BQ93098 351 aa13.15□□□□□ -0.3
LTBR-214ENST00000545445 PLIN2Q99541 437 aa13.15□□□□□ -0.3
LTBR-214ENST00000545445 TIPINQ9BVW5 301 aa13.15□□□□□ -0.3
LTBR-214ENST00000545445 BHMT2Q9H2M3 363 aa13.15□□□□□ -0.3
LTBR-214ENST00000545445 DHX33Q9H6R0 707 aaKnown RBP13.15□□□□□ -0.3
LTBR-214ENST00000545445 LMBRD1Q9NUN5 540 aa13.15□□□□□ -0.3
LTBR-214ENST00000545445 A0A087X0B3 334 aa13.14□□□□□ -0.31
LTBR-214ENST00000545445 C19orf67A6NJJ6 358 aa13.14□□□□□ -0.31
LTBR-214ENST00000545445 ZBTB39O15060 712 aa13.14□□□□□ -0.31
LTBR-214ENST00000545445 EFCAB14O75071 495 aa13.14□□□□□ -0.31
LTBR-214ENST00000545445 MAFO75444 373 aaPredicted RBP13.14□□□□□ -0.31
LTBR-214ENST00000545445 KLRC1P26715 233 aa13.14□□□□□ -0.31
LTBR-214ENST00000545445 TMOD1P28289 359 aa13.14□□□□□ -0.31
LTBR-214ENST00000545445 MCM4P33991 863 aa13.14□□□□□ -0.31
LTBR-214ENST00000545445 IRS1P35568 1242 aa13.14□□□□□ -0.31
LTBR-214ENST00000545445 POLGP54098 1239 aaPredicted RBP13.14□□□□□ -0.31
LTBR-214ENST00000545445 SLC12A3P55017 1021 aa13.14□□□□□ -0.31
LTBR-214ENST00000545445 NPEPPSP55786 919 aa13.14□□□□□ -0.31
LTBR-214ENST00000545445 MBTPS1Q14703 1052 aa13.14□□□□□ -0.31
LTBR-214ENST00000545445 E2F4Q16254 413 aa13.14□□□□□ -0.31
LTBR-214ENST00000545445 NAALADL2Q58DX5 795 aa13.14□□□□□ -0.31
LTBR-214ENST00000545445 PLA2G4FQ68DD2 849 aa13.14□□□□□ -0.31
LTBR-214ENST00000545445 KANK3Q6NY19 840 aa13.14□□□□□ -0.31
LTBR-214ENST00000545445 TRAF7Q6Q0C0 670 aa13.14□□□□□ -0.31
LTBR-214ENST00000545445 PADI6Q6TGC4 694 aa13.14□□□□□ -0.31
LTBR-214ENST00000545445 ADHFE1Q8IWW8 467 aa13.14□□□□□ -0.31
LTBR-214ENST00000545445 MYOCDQ8IZQ8 938 aa13.14□□□□□ -0.31
LTBR-214ENST00000545445 MCPH1Q8NEM0 835 aa13.14□□□□□ -0.31
LTBR-214ENST00000545445 PRSS33Q8NF86 280 aa13.14□□□□□ -0.31
LTBR-214ENST00000545445 DHX58Q96C10 678 aa13.14□□□□□ -0.31
LTBR-214ENST00000545445 PABPC5Q96DU9 382 aaKnown RBP13.14□□□□□ -0.31
LTBR-214ENST00000545445 CEP89Q96ST8 783 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms