RNA–Protein interactions for RNA: ENST00000544778.6

BPTF-208, Transcript of bromodomain PHD finger transcription factor, human

TSL 5

Gene BPTF, Length 7,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BPTF-208	ENST00000544778	GTF2H3	Q13889	308 aa		21.33	■■□□□ 1.01
BPTF-208	ENST00000544778	TOGARAM2	Q6ZUX3	1019 aa		21.33	■■□□□ 1.01
BPTF-208	ENST00000544778	RRP15	Q9Y3B9	282 aa	Known RBP	21.33	■■□□□ 1.01
BPTF-208	ENST00000544778		H0Y3Z8	333 aa		21.33	■■□□□ 1
BPTF-208	ENST00000544778	FGG	P02679	453 aa		21.33	■■□□□ 1
BPTF-208	ENST00000544778	NR1D1	P20393	614 aa		21.33	■■□□□ 1
BPTF-208	ENST00000544778	PRKCQ	Q04759	706 aa		21.33	■■□□□ 1
BPTF-208	ENST00000544778	ALCAM	Q13740	583 aa		21.33	■■□□□ 1
BPTF-208	ENST00000544778	TMEM270	Q6UE05	265 aa		21.33	■■□□□ 1
BPTF-208	ENST00000544778	TEX9	Q8N6V9	391 aa		21.33	■■□□□ 1
BPTF-208	ENST00000544778	ZC3H4	Q9UPT8	1303 aa	Known RBP	21.33	■■□□□ 1
BPTF-208	ENST00000544778		A0A087WWV3	80 aa		21.33	■■□□□ 1
BPTF-208	ENST00000544778	PRKAB2	O43741	272 aa		21.33	■■□□□ 1
BPTF-208	ENST00000544778	PPP3CC	P48454	512 aa		21.33	■■□□□ 1
BPTF-208	ENST00000544778	SYTL3	Q4VX76	610 aa		21.33	■■□□□ 1
BPTF-208	ENST00000544778	KRT39	Q6A163	491 aa		21.33	■■□□□ 1
BPTF-208	ENST00000544778	KCNA2	P16389	499 aa		21.33	■■□□□ 1
BPTF-208	ENST00000544778	GRIK1	P39086	918 aa		21.33	■■□□□ 1
BPTF-208	ENST00000544778	PDCL	Q13371	301 aa		21.33	■■□□□ 1
BPTF-208	ENST00000544778	BTBD6	Q96KE9	485 aa		21.33	■■□□□ 1
BPTF-208	ENST00000544778	RAVER2	Q9HCJ3	691 aa	Known RBP	21.33	■■□□□ 1
BPTF-208	ENST00000544778	FAM213A	Q9BRX8	229 aa		21.32	■■□□□ 1
BPTF-208	ENST00000544778	IMPDH2	P12268	514 aa		21.32	■■□□□ 1
BPTF-208	ENST00000544778	NR5A1	Q13285	461 aa		21.32	■■□□□ 1
BPTF-208	ENST00000544778	MMP19	Q99542	508 aa		21.32	■■□□□ 1
BPTF-208	ENST00000544778	CYP26B1	Q9NR63	512 aa		21.32	■■□□□ 1
BPTF-208	ENST00000544778	PCSK1N	Q9UHG2	260 aa		21.32	■■□□□ 1
BPTF-208	ENST00000544778	CCDC151	A5D8V7	595 aa		21.32	■■□□□ 1
BPTF-208	ENST00000544778	LCP1	P13796	627 aa		21.32	■■□□□ 1
BPTF-208	ENST00000544778	THAP9	Q9H5L6	903 aa		21.32	■■□□□ 1
BPTF-208	ENST00000544778	ZFP69B	Q9UJL9	534 aa		21.32	■■□□□ 1
BPTF-208	ENST00000544778	NPM3	O75607	178 aa	Known RBP	21.32	■■□□□ 1
BPTF-208	ENST00000544778	ASAP1	Q9ULH1	1129 aa		21.32	■■□□□ 1
BPTF-208	ENST00000544778	PIK3C2G	O75747	1445 aa		21.32	■■□□□ 1
BPTF-208	ENST00000544778	KDM5A	P29375	1690 aa	Known RBP	21.32	■■□□□ 1
BPTF-208	ENST00000544778	NEK2	P51955	445 aa		21.32	■■□□□ 1
BPTF-208	ENST00000544778	VEPH1	Q14D04	833 aa		21.32	■■□□□ 1
BPTF-208	ENST00000544778	FASTKD1	Q53R41	847 aa	Known RBP	21.32	■■□□□ 1
BPTF-208	ENST00000544778	RAD18	Q9NS91	495 aa		21.32	■■□□□ 1
BPTF-208	ENST00000544778	TCF3	P15923	654 aa		21.32	■■□□□ 1
BPTF-208	ENST00000544778	MED21	Q13503	144 aa		21.32	■■□□□ 1
BPTF-208	ENST00000544778	MRPL40	Q9NQ50	206 aa	Known RBP	21.32	■■□□□ 1
BPTF-208	ENST00000544778	ABCB11	O95342	1321 aa		21.31	■■□□□ 1
BPTF-208	ENST00000544778	CYP2D7	A0A087X1C5	515 aa		21.31	■■□□□ 1
BPTF-208	ENST00000544778	CCDC159	P0C7I6	412 aa		21.31	■■□□□ 1
BPTF-208	ENST00000544778	JAK3	P52333	1124 aa		21.31	■■□□□ 1
BPTF-208	ENST00000544778	ZNF772	Q68DY9	489 aa	Predicted RBP	21.31	■■□□□ 1
BPTF-208	ENST00000544778	NFU1	Q9UMS0	254 aa		21.31	■■□□□ 1
BPTF-208	ENST00000544778	CCDC157	Q569K6	752 aa		21.31	■■□□□ 1
BPTF-208	ENST00000544778	PALMD	Q9NP74	551 aa		21.31	■■□□□ 1
BPTF-208	ENST00000544778	SEPT2	Q15019	361 aa		21.31	■■□□□ 1
BPTF-208	ENST00000544778	LCORL	Q8N3X6	602 aa		21.31	■■□□□ 1
BPTF-208	ENST00000544778	CDC25B	P30305	580 aa		21.31	■■□□□ 1
BPTF-208	ENST00000544778	FAM83B	Q5T0W9	1011 aa		21.31	■■□□□ 1
BPTF-208	ENST00000544778	RFX8	Q6ZV50	586 aa		21.31	■■□□□ 1
BPTF-208	ENST00000544778	BBOX1	O75936	387 aa		21.31	■■□□□ 1
BPTF-208	ENST00000544778	MMP1	P03956	469 aa		21.31	■■□□□ 1
BPTF-208	ENST00000544778	DPCR1	Q3MIW9	517 aa		21.31	■■□□□ 1
BPTF-208	ENST00000544778	MEI1	Q5TIA1	1274 aa		21.31	■■□□□ 1
BPTF-208	ENST00000544778	TBC1D19	Q8N5T2	526 aa		21.31	■■□□□ 1
BPTF-208	ENST00000544778	SAMSN1	Q9NSI8	373 aa	Known RBP	21.31	■■□□□ 1
BPTF-208	ENST00000544778	PDHA1	P08559	390 aa		21.31	■■□□□ 1
BPTF-208	ENST00000544778	CUL1	Q13616	776 aa		21.31	■■□□□ 1
BPTF-208	ENST00000544778	MFSD14C	Q5VZR4	134 aa		21.31	■■□□□ 1
BPTF-208	ENST00000544778	TBC1D1	Q86TI0	1168 aa	Predicted RBP	21.31	■■□□□ 1
BPTF-208	ENST00000544778	MAP3K20	Q9NYL2	800 aa	Known RBP	21.31	■■□□□ 1
BPTF-208	ENST00000544778	TJP2	Q9UDY2	1190 aa		21.31	■■□□□ 1
BPTF-208	ENST00000544778	PLAA	Q9Y263	795 aa		21.31	■■□□□ 1
BPTF-208	ENST00000544778	C21orf2	O43822	256 aa		21.3	■■□□□ 1
BPTF-208	ENST00000544778	GUCA1C	O95843	209 aa		21.3	■■□□□ 1
BPTF-208	ENST00000544778	SLC9A1	P19634	815 aa		21.3	■■□□□ 1
BPTF-208	ENST00000544778	HEATR6	Q6AI08	1181 aa	Known RBP	21.3	■■□□□ 1
BPTF-208	ENST00000544778	RINL	Q6ZS11	566 aa		21.3	■■□□□ 1
BPTF-208	ENST00000544778	RMDN3	Q96TC7	470 aa		21.3	■■□□□ 1
BPTF-208	ENST00000544778	GCOM2	Q9BZD3	368 aa	Predicted RBP	21.3	■■□□□ 1
BPTF-208	ENST00000544778	LAMC3	Q9Y6N6	1575 aa		21.3	■■□□□ 1
BPTF-208	ENST00000544778	GSN	P06396	782 aa		21.3	■■□□□ 1
BPTF-208	ENST00000544778	DDX5	P17844	614 aa	Known RBP	21.3	■■□□□ 1
BPTF-208	ENST00000544778	HIBCH	Q6NVY1	386 aa	Predicted RBP	21.3	■■□□□ 1
BPTF-208	ENST00000544778	CNOT8	Q9UFF9	292 aa	Known RBP	21.3	■■□□□ 1
BPTF-208	ENST00000544778	ZHX2	Q9Y6X8	837 aa		21.3	■■□□□ 1
BPTF-208	ENST00000544778	FBXO18	Q8NFZ0	1043 aa		21.3	■■□□□ 1
BPTF-208	ENST00000544778	TMEM60	Q9H2L4	133 aa		21.3	■■□□□ 1
BPTF-208	ENST00000544778	RALA	P11233	206 aa		21.3	■■□□□ 1
BPTF-208	ENST00000544778	RAD51	Q06609	339 aa		21.3	■■□□□ 1
BPTF-208	ENST00000544778	NAALADL2	Q58DX5	795 aa		21.3	■■□□□ 1
BPTF-208	ENST00000544778	BHMT2	Q9H2M3	363 aa		21.3	■■□□□ 1
BPTF-208	ENST00000544778	MLH3	Q9UHC1	1453 aa		21.3	■■□□□ 1
BPTF-208	ENST00000544778	SLC39A14	Q15043	492 aa		21.3	■■□□□ 1
BPTF-208	ENST00000544778	GPBP1L1	Q9HC44	474 aa	Predicted RBP	21.3	■■□□□ 1
BPTF-208	ENST00000544778	CDK8	P49336	464 aa		21.3	■■□□□ 1
BPTF-208	ENST00000544778	EIF3B	P55884	814 aa	Known RBP	21.3	■■□□□ 1
BPTF-208	ENST00000544778	RBM41	Q96IZ5	413 aa	Known RBP	21.3	■■□□□ 1
BPTF-208	ENST00000544778	KRT38	O76015	456 aa		21.29	■■□□□ 1
BPTF-208	ENST00000544778	HDAC4	P56524	1084 aa		21.29	■■□□□ 1
BPTF-208	ENST00000544778	APOA5	Q6Q788	366 aa		21.29	■■□□□ 1
BPTF-208	ENST00000544778	MB21D1	Q8N884	522 aa		21.29	■■□□□ 1
BPTF-208	ENST00000544778	TSSK1B	Q9BXA7	367 aa		21.29	■■□□□ 1
BPTF-208	ENST00000544778	CYP4F11	Q9HBI6	524 aa		21.29	■■□□□ 1
BPTF-208	ENST00000544778	CTIF	O43310	598 aa	Known RBP	21.29	■■□□□ 1

Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms