RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-231	ENST00000544639	POLR3B	Q9NW08	1133 aa	Predicted RBP	5.74	□□□□□ -1.49
RAP1B-231	ENST00000544639	SAE1	Q9UBE0	346 aa	Predicted RBP	5.74	□□□□□ -1.49
RAP1B-231	ENST00000544639	MAGEL2	Q9UJ55	1249 aa		5.74	□□□□□ -1.49
RAP1B-231	ENST00000544639	TNKS	O95271	1327 aa		5.74	□□□□□ -1.49
RAP1B-231	ENST00000544639	FZD9	O00144	591 aa		5.73	□□□□□ -1.49
RAP1B-231	ENST00000544639	HMGCR	P04035	888 aa		5.73	□□□□□ -1.49
RAP1B-231	ENST00000544639	MYBL2	P10244	700 aa		5.73	□□□□□ -1.49
RAP1B-231	ENST00000544639	GPR15	P49685	360 aa		5.73	□□□□□ -1.49
RAP1B-231	ENST00000544639	STAT5B	P51692	787 aa		5.73	□□□□□ -1.49
RAP1B-231	ENST00000544639	MRPS9	P82933	396 aa	Known RBP	5.73	□□□□□ -1.49
RAP1B-231	ENST00000544639	PPARA	Q07869	468 aa		5.73	□□□□□ -1.49
RAP1B-231	ENST00000544639	ZNF827	Q17R98	1081 aa		5.73	□□□□□ -1.49
RAP1B-231	ENST00000544639	TRIM68	Q6AZZ1	485 aa		5.73	□□□□□ -1.49
RAP1B-231	ENST00000544639	LARP4	Q71RC2	724 aa	Known RBP eCLIP	5.73	□□□□□ -1.49
RAP1B-231	ENST00000544639	KCNK18	Q7Z418	384 aa		5.73	□□□□□ -1.49
RAP1B-231	ENST00000544639	NKD2	Q969F2	451 aa	Predicted RBP	5.73	□□□□□ -1.49
RAP1B-231	ENST00000544639	DYDC2	Q96IM9	177 aa		5.73	□□□□□ -1.49
RAP1B-231	ENST00000544639	RAX2	Q96IS3	184 aa		5.73	□□□□□ -1.49
RAP1B-231	ENST00000544639	HIST1H2AH	Q96KK5	128 aa		5.73	□□□□□ -1.49
RAP1B-231	ENST00000544639	CEP89	Q96ST8	783 aa		5.73	□□□□□ -1.49
RAP1B-231	ENST00000544639	HIST1H2AJ	Q99878	128 aa		5.73	□□□□□ -1.49
RAP1B-231	ENST00000544639	QRSL1	Q9H0R6	528 aa	Known RBP	5.73	□□□□□ -1.49
RAP1B-231	ENST00000544639	PRSS50	Q9UI38	385 aa		5.73	□□□□□ -1.49
RAP1B-231	ENST00000544639	EDAR	Q9UNE0	448 aa		5.73	□□□□□ -1.49
RAP1B-231	ENST00000544639		A0A0A6YYK5	440 aa	Predicted RBP	5.72	□□□□□ -1.49
RAP1B-231	ENST00000544639	SHTN1	A0MZ66	631 aa		5.72	□□□□□ -1.49
RAP1B-231	ENST00000544639	MROH6	A6NGR9	719 aa		5.72	□□□□□ -1.49
RAP1B-231	ENST00000544639	NOBOX	O60393	691 aa		5.72	□□□□□ -1.49
RAP1B-231	ENST00000544639	SEC24D	O94855	1032 aa	Predicted RBP	5.72	□□□□□ -1.49
RAP1B-231	ENST00000544639	CFB	P00751	764 aa		5.72	□□□□□ -1.49
RAP1B-231	ENST00000544639	ZNF888	P0CJ79	500 aa	Predicted RBP	5.72	□□□□□ -1.49
RAP1B-231	ENST00000544639	RBP3	P10745	1247 aa		5.72	□□□□□ -1.49
RAP1B-231	ENST00000544639	KCNC1	P48547	511 aa		5.72	□□□□□ -1.49
RAP1B-231	ENST00000544639	MTNR1B	P49286	362 aa		5.72	□□□□□ -1.49
RAP1B-231	ENST00000544639	LGALS4	P56470	323 aa		5.72	□□□□□ -1.49
RAP1B-231	ENST00000544639	SRSF2	Q01130	221 aa	Known RBP	5.72	□□□□□ -1.49
RAP1B-231	ENST00000544639	USP10	Q14694	798 aa	Known RBP	5.72	□□□□□ -1.49
RAP1B-231	ENST00000544639	CCDC178	Q5BJE1	867 aa		5.72	□□□□□ -1.49
RAP1B-231	ENST00000544639	TOR2A	Q5JU69	321 aa		5.72	□□□□□ -1.49
RAP1B-231	ENST00000544639	GPR155	Q7Z3F1	870 aa		5.72	□□□□□ -1.49
RAP1B-231	ENST00000544639	SP8	Q8IXZ3	490 aa		5.72	□□□□□ -1.49
RAP1B-231	ENST00000544639	OR14C36	Q8NHC7	312 aa		5.72	□□□□□ -1.49
RAP1B-231	ENST00000544639	GAB3	Q8WWW8	586 aa		5.72	□□□□□ -1.49
RAP1B-231	ENST00000544639	FUBP3	Q96I24	572 aa	Known RBP eCLIP	5.72	□□□□□ -1.49
RAP1B-231	ENST00000544639	SOX7	Q9BT81	388 aa		5.72	□□□□□ -1.49
RAP1B-231	ENST00000544639	CARD11	Q9BXL7	1154 aa		5.72	□□□□□ -1.49
RAP1B-231	ENST00000544639	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	5.72	□□□□□ -1.49
RAP1B-231	ENST00000544639	DNAJC28	Q9NX36	388 aa		5.72	□□□□□ -1.49
RAP1B-231	ENST00000544639	USP18	Q9UMW8	372 aa		5.72	□□□□□ -1.49
RAP1B-231	ENST00000544639	VWA7	Q9Y334	891 aa		5.72	□□□□□ -1.49
RAP1B-231	ENST00000544639	SPEF1	Q9Y4P9	236 aa		5.72	□□□□□ -1.49
RAP1B-231	ENST00000544639	CDY2A	Q9Y6F7	541 aa		5.72	□□□□□ -1.49
RAP1B-231	ENST00000544639	ALDH1L1	O75891	902 aa		5.71	□□□□□ -1.5
RAP1B-231	ENST00000544639	NEK2	P51955	445 aa		5.71	□□□□□ -1.5
RAP1B-231	ENST00000544639	GJA9	P57773	515 aa		5.71	□□□□□ -1.5
RAP1B-231	ENST00000544639	KRT85	P78386	507 aa		5.71	□□□□□ -1.5
RAP1B-231	ENST00000544639	SPIDR	Q14159	915 aa		5.71	□□□□□ -1.5
RAP1B-231	ENST00000544639	PCOLCE	Q15113	449 aa		5.71	□□□□□ -1.5
RAP1B-231	ENST00000544639	TTF1	Q15361	905 aa	Predicted RBP	5.71	□□□□□ -1.5
RAP1B-231	ENST00000544639	PTPN21	Q16825	1174 aa		5.71	□□□□□ -1.5
RAP1B-231	ENST00000544639	MUM1	Q2TAK8	710 aa		5.71	□□□□□ -1.5
RAP1B-231	ENST00000544639	PGM2L1	Q6PCE3	622 aa		5.71	□□□□□ -1.5
RAP1B-231	ENST00000544639	GAREM2	Q75VX8	874 aa		5.71	□□□□□ -1.5
RAP1B-231	ENST00000544639	AMOTL1	Q8IY63	956 aa		5.71	□□□□□ -1.5
RAP1B-231	ENST00000544639	PPP1R14C	Q8TAE6	165 aa		5.71	□□□□□ -1.5
RAP1B-231	ENST00000544639	TSPEAR	Q8WU66	669 aa		5.71	□□□□□ -1.5
RAP1B-231	ENST00000544639	FAXDC2	Q96IV6	333 aa		5.71	□□□□□ -1.5
RAP1B-231	ENST00000544639	WDR92	Q96MX6	357 aa		5.71	□□□□□ -1.5
RAP1B-231	ENST00000544639	FDXACB1	Q9BRP7	624 aa	Predicted RBP	5.71	□□□□□ -1.5
RAP1B-231	ENST00000544639	SLC13A1	Q9BZW2	595 aa		5.71	□□□□□ -1.5
RAP1B-231	ENST00000544639	KIAA1683	Q9H0B3	1180 aa		5.71	□□□□□ -1.5
RAP1B-231	ENST00000544639	DPP7	Q9UHL4	492 aa		5.71	□□□□□ -1.5
RAP1B-231	ENST00000544639	EVL	Q9UI08	416 aa	Predicted RBP	5.71	□□□□□ -1.5
RAP1B-231	ENST00000544639	DNAI1	Q9UI46	699 aa		5.71	□□□□□ -1.5
RAP1B-231	ENST00000544639	SYNPO2	Q9UMS6	1093 aa		5.71	□□□□□ -1.5
RAP1B-231	ENST00000544639	PTPN22	Q9Y2R2	807 aa		5.71	□□□□□ -1.5
RAP1B-231	ENST00000544639	S100B	P04271	92 aa	Predicted RBP	5.7	□□□□□ -1.5
RAP1B-231	ENST00000544639	MTHFD2	P13995	350 aa		5.7	□□□□□ -1.5
RAP1B-231	ENST00000544639	RRAD	P55042	308 aa		5.7	□□□□□ -1.5
RAP1B-231	ENST00000544639	PCBP2	Q15366	365 aa	Known RBP eCLIP	5.7	□□□□□ -1.5
RAP1B-231	ENST00000544639	ODR4	Q5SWX8	454 aa		5.7	□□□□□ -1.5
RAP1B-231	ENST00000544639	NT5DC1	Q5TFE4	455 aa		5.7	□□□□□ -1.5
RAP1B-231	ENST00000544639	KLHDC10	Q6PID8	442 aa		5.7	□□□□□ -1.5
RAP1B-231	ENST00000544639	RALYL	Q86SE5	291 aa	Known RBP	5.7	□□□□□ -1.5
RAP1B-231	ENST00000544639	FAM124A	Q86V42	546 aa		5.7	□□□□□ -1.5
RAP1B-231	ENST00000544639	RTKN2	Q8IZC4	609 aa		5.7	□□□□□ -1.5
RAP1B-231	ENST00000544639	SYT8	Q8NBV8	401 aa		5.7	□□□□□ -1.5
RAP1B-231	ENST00000544639	AUTS2	Q8WXX7	1259 aa		5.7	□□□□□ -1.5
RAP1B-231	ENST00000544639	CHMP4C	Q96CF2	233 aa		5.7	□□□□□ -1.5
RAP1B-231	ENST00000544639	OSBPL6	Q9BZF3	934 aa		5.7	□□□□□ -1.5
RAP1B-231	ENST00000544639	ZNF277	Q9NRM2	450 aa	Predicted RBP	5.7	□□□□□ -1.5
RAP1B-231	ENST00000544639	MKS1	Q9NXB0	559 aa		5.7	□□□□□ -1.5
RAP1B-231	ENST00000544639	THRAP3	Q9Y2W1	955 aa	Known RBP	5.7	□□□□□ -1.5
RAP1B-231	ENST00000544639	ZDHHC9	Q9Y397	364 aa		5.7	□□□□□ -1.5
RAP1B-231	ENST00000544639	GPR45	Q9Y5Y3	372 aa		5.7	□□□□□ -1.5
RAP1B-231	ENST00000544639	OTOL1	A6NHN0	477 aa	Predicted RBP	5.69	□□□□□ -1.5
RAP1B-231	ENST00000544639	PCDHGA12	O60330	932 aa		5.69	□□□□□ -1.5
RAP1B-231	ENST00000544639	NRP2	O60462	931 aa		5.69	□□□□□ -1.5
RAP1B-231	ENST00000544639	B4GALT3	O60512	393 aa		5.69	□□□□□ -1.5
RAP1B-231	ENST00000544639	OSM	P13725	252 aa		5.69	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms