RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 E9PMD0 336 aa12.28□□□□□ -0.44
DDB1-222ENST00000543627 INO80B-WBP1J3KQ70 363 aa12.28□□□□□ -0.44
DDB1-222ENST00000543627 ASAP2O43150 1006 aa12.28□□□□□ -0.44
DDB1-222ENST00000543627 LYPLA2O95372 231 aa12.28□□□□□ -0.44
DDB1-222ENST00000543627 XRCC6P12956 609 aaKnown RBP eCLIP12.28□□□□□ -0.44
DDB1-222ENST00000543627 SFPQP23246 707 aaKnown RBP eCLIP12.28□□□□□ -0.44
DDB1-222ENST00000543627 PRPHP41219 470 aa12.28□□□□□ -0.44
DDB1-222ENST00000543627 SARSP49591 514 aaKnown RBP12.28□□□□□ -0.44
DDB1-222ENST00000543627 RESTQ13127 1097 aa12.28□□□□□ -0.44
DDB1-222ENST00000543627 TFDP1Q14186 410 aa12.28□□□□□ -0.44
DDB1-222ENST00000543627 DHX8Q14562 1220 aaKnown RBP12.28□□□□□ -0.44
DDB1-222ENST00000543627 TMEM132AQ24JP5 1023 aa12.28□□□□□ -0.44
DDB1-222ENST00000543627 TWF2Q6IBS0 349 aaKnown RBP12.28□□□□□ -0.44
DDB1-222ENST00000543627 SLC24A5Q71RS6 500 aa12.28□□□□□ -0.44
DDB1-222ENST00000543627 ZNF410Q86VK4 478 aa12.28□□□□□ -0.44
DDB1-222ENST00000543627 NPAS4Q8IUM7 802 aa12.28□□□□□ -0.44
DDB1-222ENST00000543627 ZNF710Q8N1W2 664 aa12.28□□□□□ -0.44
DDB1-222ENST00000543627 TGS1Q96RS0 853 aaKnown RBP12.28□□□□□ -0.44
DDB1-222ENST00000543627 TSPYL2Q9H2G4 693 aaPredicted RBP12.28□□□□□ -0.44
DDB1-222ENST00000543627 XPNPEP1Q9NQW7 623 aa12.28□□□□□ -0.44
DDB1-222ENST00000543627 RGS18Q9NS28 235 aa12.28□□□□□ -0.44
DDB1-222ENST00000543627 C1orf112Q9NSG2 853 aa12.28□□□□□ -0.44
DDB1-222ENST00000543627 STK24Q9Y6E0 443 aa12.28□□□□□ -0.44
DDB1-222ENST00000543627 MYO9BQ13459 2157 aa12.28□□□□□ -0.44
DDB1-222ENST00000543627 EPOPA6NHQ4 379 aa12.27□□□□□ -0.45
DDB1-222ENST00000543627 TBKBP1A7MCY6 615 aa12.27□□□□□ -0.45
DDB1-222ENST00000543627 GTPBP6O43824 516 aaPredicted RBP12.27□□□□□ -0.45
DDB1-222ENST00000543627 GAS2O43903 313 aaKnown RBP12.27□□□□□ -0.45
DDB1-222ENST00000543627 ERLIN2O94905 339 aa12.27□□□□□ -0.45
DDB1-222ENST00000543627 FGFR1P11362 822 aa12.27□□□□□ -0.45
DDB1-222ENST00000543627 UBA7P41226 1012 aa12.27□□□□□ -0.45
DDB1-222ENST00000543627 PHKA2P46019 1235 aa12.27□□□□□ -0.45
DDB1-222ENST00000543627 HTRA4P83105 476 aaPredicted RBP12.27□□□□□ -0.45
DDB1-222ENST00000543627 RAD51AP2Q09MP3 1159 aa12.27□□□□□ -0.45
DDB1-222ENST00000543627 MXD4Q14582 209 aaPredicted RBP12.27□□□□□ -0.45
DDB1-222ENST00000543627 SKIV2LQ15477 1246 aaKnown RBP12.27□□□□□ -0.45
DDB1-222ENST00000543627 SPECC1Q5M775 1068 aa12.27□□□□□ -0.45
DDB1-222ENST00000543627 CABP7Q86V35 215 aa12.27□□□□□ -0.45
DDB1-222ENST00000543627 ABI1Q8IZP0 508 aa12.27□□□□□ -0.45
DDB1-222ENST00000543627 IGSF22Q8N9C0 903 aa12.27□□□□□ -0.45
DDB1-222ENST00000543627 FBXO22Q8NEZ5 403 aa12.27□□□□□ -0.45
DDB1-222ENST00000543627 MAFAQ8NHW3 353 aaPredicted RBP12.27□□□□□ -0.45
DDB1-222ENST00000543627 ASAP3Q8TDY4 903 aa12.27□□□□□ -0.45
DDB1-222ENST00000543627 GDPD5Q8WTR4 605 aa12.27□□□□□ -0.45
DDB1-222ENST00000543627 TFIP11Q9UBB9 837 aaKnown RBP12.27□□□□□ -0.45
DDB1-222ENST00000543627 DBR1Q9UK59 544 aaKnown RBP12.27□□□□□ -0.45
DDB1-222ENST00000543627 PTPRSQ13332 1948 aa12.27□□□□□ -0.45
DDB1-222ENST00000543627 DGKIO75912 1065 aa12.26□□□□□ -0.45
DDB1-222ENST00000543627 BMP15O95972 392 aa12.26□□□□□ -0.45
DDB1-222ENST00000543627 GLRA2P23416 452 aa12.26□□□□□ -0.45
DDB1-222ENST00000543627 CTNNB1P35222 781 aa12.26□□□□□ -0.45
DDB1-222ENST00000543627 GRIN1Q05586 938 aa12.26□□□□□ -0.45
DDB1-222ENST00000543627 NCBP1Q09161 790 aaKnown RBP12.26□□□□□ -0.45
DDB1-222ENST00000543627 ADGRE1Q14246 886 aa12.26□□□□□ -0.45
DDB1-222ENST00000543627 SRGAP1Q7Z6B7 1085 aa12.26□□□□□ -0.45
DDB1-222ENST00000543627 TMEM192Q8IY95 271 aa12.26□□□□□ -0.45
DDB1-222ENST00000543627 MCPH1Q8NEM0 835 aa12.26□□□□□ -0.45
DDB1-222ENST00000543627 CALML4Q96GE6 196 aa12.26□□□□□ -0.45
DDB1-222ENST00000543627 CPB2Q96IY4 423 aa12.26□□□□□ -0.45
DDB1-222ENST00000543627 ZSCAN16Q9H4T2 348 aaPredicted RBP12.26□□□□□ -0.45
DDB1-222ENST00000543627 MINDY3Q9H8M7 445 aa12.26□□□□□ -0.45
DDB1-222ENST00000543627 IFT122Q9HBG6 1241 aa12.26□□□□□ -0.45
DDB1-222ENST00000543627 RNF216Q9NWF9 866 aaPredicted RBP12.26□□□□□ -0.45
DDB1-222ENST00000543627 DACT1Q9NYF0 836 aa12.26□□□□□ -0.45
DDB1-222ENST00000543627 CCDC169A6NNP5 214 aa12.25□□□□□ -0.45
DDB1-222ENST00000543627 C9IYK1 514 aa12.25□□□□□ -0.45
DDB1-222ENST00000543627 CYP11B2P19099 503 aa12.25□□□□□ -0.45
DDB1-222ENST00000543627 ARL2P36404 184 aa12.25□□□□□ -0.45
DDB1-222ENST00000543627 ERVK-21P61565 698 aa12.25□□□□□ -0.45
DDB1-222ENST00000543627 GRB10Q13322 594 aa12.25□□□□□ -0.45
DDB1-222ENST00000543627 GPM6BQ13491 265 aa12.25□□□□□ -0.45
DDB1-222ENST00000543627 CAPSQ13938 189 aa12.25□□□□□ -0.45
DDB1-222ENST00000543627 DSC3Q14574 896 aa12.25□□□□□ -0.45
DDB1-222ENST00000543627 STK38Q15208 465 aa12.25□□□□□ -0.45
DDB1-222ENST00000543627 TPRNQ4KMQ1 711 aa12.25□□□□□ -0.45
DDB1-222ENST00000543627 EPC2Q52LR7 807 aa12.25□□□□□ -0.45
DDB1-222ENST00000543627 ARL6IP4Q66PJ3 421 aaKnown RBP12.25□□□□□ -0.45
DDB1-222ENST00000543627 ECHDC2Q86YB7 292 aa12.25□□□□□ -0.45
DDB1-222ENST00000543627 DEPTORQ8TB45 409 aa12.25□□□□□ -0.45
DDB1-222ENST00000543627 LPPQ93052 612 aa12.25□□□□□ -0.45
DDB1-222ENST00000543627 IFT74Q96LB3 600 aa12.25□□□□□ -0.45
DDB1-222ENST00000543627 CLIC6Q96NY7 704 aa12.25□□□□□ -0.45
DDB1-222ENST00000543627 USP28Q96RU2 1077 aa12.25□□□□□ -0.45
DDB1-222ENST00000543627 MMTAG2Q9BU76 263 aaKnown RBP12.25□□□□□ -0.45
DDB1-222ENST00000543627 ADGRA3Q8IWK6 1321 aa12.25□□□□□ -0.45
DDB1-222ENST00000543627 SFI1A8K8P3 1242 aa12.24□□□□□ -0.45
DDB1-222ENST00000543627 EYA4O95677 639 aa12.24□□□□□ -0.45
DDB1-222ENST00000543627 MUTP22033 750 aa12.24□□□□□ -0.45
DDB1-222ENST00000543627 KARSQ15046 597 aaKnown RBP12.24□□□□□ -0.45
DDB1-222ENST00000543627 KCNK18Q7Z418 384 aa12.24□□□□□ -0.45
DDB1-222ENST00000543627 CDR2LQ86X02 465 aaPredicted RBP12.24□□□□□ -0.45
DDB1-222ENST00000543627 ZBTB8OSQ8IWT0 167 aa12.24□□□□□ -0.45
DDB1-222ENST00000543627 SLC17A8Q8NDX2 589 aa12.24□□□□□ -0.45
DDB1-222ENST00000543627 HELQQ8TDG4 1101 aa12.24□□□□□ -0.45
DDB1-222ENST00000543627 ZNF396Q96N95 335 aaPredicted RBP12.24□□□□□ -0.45
DDB1-222ENST00000543627 PNMA5Q96PV4 448 aa12.24□□□□□ -0.45
DDB1-222ENST00000543627 APOL6Q9BWW8 343 aa12.24□□□□□ -0.45
DDB1-222ENST00000543627 PANK2Q9BZ23 570 aa12.24□□□□□ -0.45
DDB1-222ENST00000543627 NT5C3AQ9H0P0 336 aa12.24□□□□□ -0.45
DDB1-222ENST00000543627 CSRNP2Q9H175 543 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms