RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 CCDC6Q16204 474 aa12.17□□□□□ -0.46
CDH4-201ENST00000543233 KRT71Q3SY84 523 aa12.17□□□□□ -0.46
CDH4-201ENST00000543233 ZFPM1Q8IX07 1006 aa12.17□□□□□ -0.46
CDH4-201ENST00000543233 REXO1Q8N1G1 1221 aaKnown RBP12.17□□□□□ -0.46
CDH4-201ENST00000543233 OGFOD1Q8N543 542 aa12.17□□□□□ -0.46
CDH4-201ENST00000543233 WDR60Q8WVS4 1066 aa12.17□□□□□ -0.46
CDH4-201ENST00000543233 ABHD8Q96I13 439 aa12.17□□□□□ -0.46
CDH4-201ENST00000543233 ARHGEF38Q9NXL2 777 aa12.17□□□□□ -0.46
CDH4-201ENST00000543233 SLC12A6Q9UHW9 1150 aa12.17□□□□□ -0.46
CDH4-201ENST00000543233 SH3GLB1Q9Y371 365 aa12.17□□□□□ -0.46
CDH4-201ENST00000543233 C5orf60A6NFR6 353 aa12.17□□□□□ -0.46
CDH4-201ENST00000543233 BBOX1O75936 387 aa12.17□□□□□ -0.46
CDH4-201ENST00000543233 GNA14O95837 355 aa12.17□□□□□ -0.46
CDH4-201ENST00000543233 TAL1P17542 331 aaPredicted RBP12.17□□□□□ -0.46
CDH4-201ENST00000543233 COPB1P53618 953 aaKnown RBP12.17□□□□□ -0.46
CDH4-201ENST00000543233 PDE4DQ08499 809 aa12.17□□□□□ -0.46
CDH4-201ENST00000543233 NFRKBQ6P4R8 1299 aa12.17□□□□□ -0.46
CDH4-201ENST00000543233 SIKE1Q9BRV8 207 aa12.17□□□□□ -0.46
CDH4-201ENST00000543233 OXCT2Q9BYC2 517 aaPredicted RBP12.17□□□□□ -0.46
CDH4-201ENST00000543233 ITM2BQ9Y287 266 aa12.17□□□□□ -0.46
CDH4-201ENST00000543233 REXO2Q9Y3B8 237 aaKnown RBP12.17□□□□□ -0.46
CDH4-201ENST00000543233 DUSP10Q9Y6W6 482 aa12.17□□□□□ -0.46
CDH4-201ENST00000543233 POLRMTO00411 1230 aaKnown RBP12.16□□□□□ -0.46
CDH4-201ENST00000543233 P4HA2O15460 535 aa12.16□□□□□ -0.46
CDH4-201ENST00000543233 OR52Z1P0C646 297 aa12.16□□□□□ -0.46
CDH4-201ENST00000543233 PDE6CP51160 858 aa12.16□□□□□ -0.46
CDH4-201ENST00000543233 RNASELQ05823 741 aaKnown RBP12.16□□□□□ -0.46
CDH4-201ENST00000543233 ZNF658Q5TYW1 1059 aaPredicted RBP12.16□□□□□ -0.46
CDH4-201ENST00000543233 GRAMD4Q6IC98 578 aa12.16□□□□□ -0.46
CDH4-201ENST00000543233 HAUS1Q96CS2 278 aa12.16□□□□□ -0.46
CDH4-201ENST00000543233 A0A1B0GUL6 1792 aa12.16□□□□□ -0.46
CDH4-201ENST00000543233 SCN7AQ01118 1682 aa12.16□□□□□ -0.46
CDH4-201ENST00000543233 SHBGP04278 402 aa12.16□□□□□ -0.46
CDH4-201ENST00000543233 GLI1P08151 1106 aa12.16□□□□□ -0.46
CDH4-201ENST00000543233 PEX5P50542 639 aa12.16□□□□□ -0.46
CDH4-201ENST00000543233 CRY2Q49AN0 593 aa12.16□□□□□ -0.46
CDH4-201ENST00000543233 CDKAL1Q5VV42 579 aa12.16□□□□□ -0.46
CDH4-201ENST00000543233 NEK8Q86SG6 692 aa12.16□□□□□ -0.46
CDH4-201ENST00000543233 XPO6Q96QU8 1125 aaKnown RBP12.16□□□□□ -0.46
CDH4-201ENST00000543233 PCDH18Q9HCL0 1135 aa12.16□□□□□ -0.46
CDH4-201ENST00000543233 R3HDM2Q9Y2K5 976 aaKnown RBP12.16□□□□□ -0.46
CDH4-201ENST00000543233 GMEB1Q9Y692 573 aa12.16□□□□□ -0.46
CDH4-201ENST00000543233 LAMB2P55268 1798 aa12.16□□□□□ -0.46
CDH4-201ENST00000543233 DCDC2CA8MYV0 355 aa12.15□□□□□ -0.46
CDH4-201ENST00000543233 NKRFO15226 690 aaKnown RBP eCLIP12.15□□□□□ -0.46
CDH4-201ENST00000543233 MMEP08473 750 aa12.15□□□□□ -0.46
CDH4-201ENST00000543233 SPATA31D3P0C874 917 aa12.15□□□□□ -0.46
CDH4-201ENST00000543233 UBTFL6P0CB48 400 aaPredicted RBP12.15□□□□□ -0.46
CDH4-201ENST00000543233 PYGMP11217 842 aa12.15□□□□□ -0.46
CDH4-201ENST00000543233 IL1R1P14778 569 aa12.15□□□□□ -0.46
CDH4-201ENST00000543233 PLCG2P16885 1265 aa12.15□□□□□ -0.46
CDH4-201ENST00000543233 OXCT1P55809 520 aa12.15□□□□□ -0.46
CDH4-201ENST00000543233 ARL6IP4Q66PJ3 421 aaKnown RBP12.15□□□□□ -0.46
CDH4-201ENST00000543233 OR52E8Q6IFG1 317 aa12.15□□□□□ -0.46
CDH4-201ENST00000543233 SPATA31D4Q6ZUB0 917 aa12.15□□□□□ -0.46
CDH4-201ENST00000543233 AGAP3Q96P47 875 aa12.15□□□□□ -0.46
CDH4-201ENST00000543233 DDX50Q9BQ39 737 aaKnown RBP12.15□□□□□ -0.46
CDH4-201ENST00000543233 RBM12Q9NTZ6 932 aaKnown RBP12.15□□□□□ -0.46
CDH4-201ENST00000543233 RMND1Q9NWS8 449 aa12.15□□□□□ -0.46
CDH4-201ENST00000543233 ZCCHC18P0CG32 403 aa12.15□□□□□ -0.46
CDH4-201ENST00000543233 CCDC166P0CW27 439 aa12.15□□□□□ -0.46
CDH4-201ENST00000543233 GNA11P29992 359 aa12.15□□□□□ -0.46
CDH4-201ENST00000543233 HOXD12P35452 270 aa12.15□□□□□ -0.46
CDH4-201ENST00000543233 KLK7P49862 253 aa12.15□□□□□ -0.46
CDH4-201ENST00000543233 CYP27A1Q02318 531 aa12.15□□□□□ -0.46
CDH4-201ENST00000543233 STK4Q13043 487 aa12.15□□□□□ -0.46
CDH4-201ENST00000543233 IKQ13123 557 aaPredicted RBP12.15□□□□□ -0.46
CDH4-201ENST00000543233 CNPY1Q3B7I2 92 aa12.15□□□□□ -0.46
CDH4-201ENST00000543233 TCP11X2Q5H9J9 407 aa12.15□□□□□ -0.46
CDH4-201ENST00000543233 CHADLQ6NUI6 762 aa12.15□□□□□ -0.46
CDH4-201ENST00000543233 TMEM53Q6P2H8 277 aa12.15□□□□□ -0.46
CDH4-201ENST00000543233 EXOC3L1Q86VI1 746 aa12.15□□□□□ -0.46
CDH4-201ENST00000543233 PROM2Q8N271 834 aa12.15□□□□□ -0.46
CDH4-201ENST00000543233 TMCO5AQ8N6Q1 288 aa12.15□□□□□ -0.46
CDH4-201ENST00000543233 CLIP3Q96DZ5 547 aa12.15□□□□□ -0.46
CDH4-201ENST00000543233 CDK5RAP3Q96JB5 506 aa12.15□□□□□ -0.46
CDH4-201ENST00000543233 NUDCD1Q96RS6 583 aa12.15□□□□□ -0.46
CDH4-201ENST00000543233 CTAGE1Q96RT6 745 aa12.15□□□□□ -0.46
CDH4-201ENST00000543233 CCDC113Q9H0I3 377 aa12.15□□□□□ -0.46
CDH4-201ENST00000543233 FAM114A2Q9NRY5 505 aa12.15□□□□□ -0.46
CDH4-201ENST00000543233 ITIH6Q6UXX5 1313 aa12.15□□□□□ -0.46
CDH4-201ENST00000543233 SLC37A4O43826 429 aa12.15□□□□□ -0.47
CDH4-201ENST00000543233 MMP10P09238 476 aa12.15□□□□□ -0.47
CDH4-201ENST00000543233 RARAP10276 462 aa12.15□□□□□ -0.47
CDH4-201ENST00000543233 NFKBIAP25963 317 aa12.15□□□□□ -0.47
CDH4-201ENST00000543233 PLOD1Q02809 727 aaPredicted RBP12.15□□□□□ -0.47
CDH4-201ENST00000543233 KCTD19Q17RG1 926 aaPredicted RBP12.15□□□□□ -0.47
CDH4-201ENST00000543233 ZNF554Q86TJ5 538 aa12.15□□□□□ -0.47
CDH4-201ENST00000543233 IQCF2Q8IXL9 164 aa12.15□□□□□ -0.47
CDH4-201ENST00000543233 LRRC34Q8IZ02 419 aa12.15□□□□□ -0.47
CDH4-201ENST00000543233 CSGALNACT2Q8N6G5 542 aa12.15□□□□□ -0.47
CDH4-201ENST00000543233 DYDC2Q96IM9 177 aa12.15□□□□□ -0.47
CDH4-201ENST00000543233 LACRTQ9GZZ8 138 aa12.15□□□□□ -0.47
CDH4-201ENST00000543233 PFDN4Q9NQP4 134 aa12.15□□□□□ -0.47
CDH4-201ENST00000543233 EXOC1Q9NV70 894 aa12.15□□□□□ -0.47
CDH4-201ENST00000543233 MTMR4Q9NYA4 1195 aa12.15□□□□□ -0.47
CDH4-201ENST00000543233 RWDD2AQ9UIY3 292 aa12.15□□□□□ -0.47
CDH4-201ENST00000543233 LUC7L2Q9Y383 392 aaKnown RBP12.15□□□□□ -0.47
CDH4-201ENST00000543233 GSTA2P09210 222 aa12.14□□□□□ -0.47
CDH4-201ENST00000543233 HERVK_113P62684 666 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms