RNA–Protein interactions for RNA: ENST00000543082.5

TCF4-208, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,399 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-208ENST00000543082 SMCO2A6NFE2 343 aa10.48□□□□□ -0.73
TCF4-208ENST00000543082 SPDYE5A6NIY4 337 aa10.48□□□□□ -0.73
TCF4-208ENST00000543082 CYTH3O43739 400 aa10.48□□□□□ -0.73
TCF4-208ENST00000543082 AFPP02771 609 aaKnown RBP10.48□□□□□ -0.73
TCF4-208ENST00000543082 TMEM253P0C7T8 217 aa10.48□□□□□ -0.73
TCF4-208ENST00000543082 TPBGLP0DKB5 382 aa10.48□□□□□ -0.73
TCF4-208ENST00000543082 PTGIRP43119 386 aa10.48□□□□□ -0.73
TCF4-208ENST00000543082 RPL21P46778 160 aaKnown RBP10.48□□□□□ -0.73
TCF4-208ENST00000543082 PEX5P50542 639 aa10.48□□□□□ -0.73
TCF4-208ENST00000543082 GALCP54803 685 aa10.48□□□□□ -0.73
TCF4-208ENST00000543082 ADAM9Q13443 819 aa10.48□□□□□ -0.73
TCF4-208ENST00000543082 EXOC3L4Q17RC7 722 aa10.48□□□□□ -0.73
TCF4-208ENST00000543082 TRMT10CQ7L0Y3 403 aaKnown RBP10.48□□□□□ -0.73
TCF4-208ENST00000543082 CCDC65Q8IXS2 484 aa10.48□□□□□ -0.73
TCF4-208ENST00000543082 ZNF34Q8IZ26 560 aa10.48□□□□□ -0.73
TCF4-208ENST00000543082 UHMK1Q8TAS1 419 aaKnown RBP10.48□□□□□ -0.73
TCF4-208ENST00000543082 ASAP3Q8TDY4 903 aa10.48□□□□□ -0.73
TCF4-208ENST00000543082 INPP5DQ92835 1189 aa10.48□□□□□ -0.73
TCF4-208ENST00000543082 ARHGEF2Q92974 986 aaKnown RBP10.48□□□□□ -0.73
TCF4-208ENST00000543082 UTP4Q969X6 686 aaKnown RBP10.48□□□□□ -0.73
TCF4-208ENST00000543082 SERPINB12Q96P63 405 aa10.48□□□□□ -0.73
TCF4-208ENST00000543082 TMEM237Q96Q45 408 aa10.48□□□□□ -0.73
TCF4-208ENST00000543082 SPZ1Q9BXG8 430 aa10.48□□□□□ -0.73
TCF4-208ENST00000543082 KANSL2Q9H9L4 492 aa10.48□□□□□ -0.73
TCF4-208ENST00000543082 RGL1Q9NZL6 768 aa10.48□□□□□ -0.73
TCF4-208ENST00000543082 WDR35Q9P2L0 1181 aa10.48□□□□□ -0.73
TCF4-208ENST00000543082 DBR1Q9UK59 544 aaKnown RBP10.48□□□□□ -0.73
TCF4-208ENST00000543082 RPL26L1Q9UNX3 145 aaKnown RBP10.48□□□□□ -0.73
TCF4-208ENST00000543082 THRAP3Q9Y2W1 955 aaKnown RBP10.48□□□□□ -0.73
TCF4-208ENST00000543082 C2CD2Q9Y426 696 aa10.48□□□□□ -0.73
TCF4-208ENST00000543082 DDX3XO00571 662 aaKnown RBP eCLIP10.48□□□□□ -0.73
TCF4-208ENST00000543082 LMNAP02545 664 aaKnown RBP10.48□□□□□ -0.73
TCF4-208ENST00000543082 IL2RBP14784 551 aa10.48□□□□□ -0.73
TCF4-208ENST00000543082 SLC9A1P19634 815 aa10.48□□□□□ -0.73
TCF4-208ENST00000543082 JAM2P57087 298 aa10.48□□□□□ -0.73
TCF4-208ENST00000543082 TFAP4Q01664 338 aa10.48□□□□□ -0.73
TCF4-208ENST00000543082 EVX2Q03828 476 aa10.48□□□□□ -0.73
TCF4-208ENST00000543082 PPATQ06203 517 aa10.48□□□□□ -0.73
TCF4-208ENST00000543082 LAMB3Q13751 1172 aa10.48□□□□□ -0.73
TCF4-208ENST00000543082 SETDB1Q15047 1291 aa10.48□□□□□ -0.73
TCF4-208ENST00000543082 WASHC2DQ5SRD0 308 aa10.48□□□□□ -0.73
TCF4-208ENST00000543082 IRGCQ6NXR0 463 aa10.48□□□□□ -0.73
TCF4-208ENST00000543082 VSTM1Q6UX27 236 aa10.48□□□□□ -0.73
TCF4-208ENST00000543082 FRMD5Q7Z6J6 570 aa10.48□□□□□ -0.73
TCF4-208ENST00000543082 NBPF5PQ86XG9 351 aaPredicted RBP10.48□□□□□ -0.73
TCF4-208ENST00000543082 DNAAF5Q86Y56 855 aa10.48□□□□□ -0.73
TCF4-208ENST00000543082 NELFCDQ8IXH7 590 aa10.48□□□□□ -0.73
TCF4-208ENST00000543082 RBM46Q8TBY0 533 aaKnown RBP10.48□□□□□ -0.73
TCF4-208ENST00000543082 BICD1Q96G01 975 aa10.48□□□□□ -0.73
TCF4-208ENST00000543082 TRAPPC9Q96Q05 1148 aa10.48□□□□□ -0.73
TCF4-208ENST00000543082 TGS1Q96RS0 853 aaKnown RBP10.48□□□□□ -0.73
TCF4-208ENST00000543082 TRIM4Q9C037 500 aa10.48□□□□□ -0.73
TCF4-208ENST00000543082 KCTD10Q9H3F6 313 aa10.48□□□□□ -0.73
TCF4-208ENST00000543082 IRAK4Q9NWZ3 460 aa10.48□□□□□ -0.73
TCF4-208ENST00000543082 PCYOX1Q9UHG3 505 aa10.48□□□□□ -0.73
TCF4-208ENST00000543082 SLIT2O94813 1529 aa10.48□□□□□ -0.73
TCF4-208ENST00000543082 POTEFA5A3E0 1075 aa10.47□□□□□ -0.73
TCF4-208ENST00000543082 PALM3A6NDB9 673 aaPredicted RBP10.47□□□□□ -0.73
TCF4-208ENST00000543082 EIF4E1BA6NMX2 242 aaKnown RBP10.47□□□□□ -0.73
TCF4-208ENST00000543082 ADAMTS2O95450 1211 aa10.47□□□□□ -0.73
TCF4-208ENST00000543082 EYA4O95677 639 aa10.47□□□□□ -0.73
TCF4-208ENST00000543082 GGPS1O95749 300 aa10.47□□□□□ -0.73
TCF4-208ENST00000543082 PDHA1P08559 390 aa10.47□□□□□ -0.73
TCF4-208ENST00000543082 POTEIP0CG38 1075 aa10.47□□□□□ -0.73
TCF4-208ENST00000543082 POTEJP0CG39 1038 aa10.47□□□□□ -0.73
TCF4-208ENST00000543082 CYP2D6P10635 497 aa10.47□□□□□ -0.73
TCF4-208ENST00000543082 LMNB1P20700 586 aa10.47□□□□□ -0.73
TCF4-208ENST00000543082 SP100P23497 879 aaPredicted RBP10.47□□□□□ -0.73
TCF4-208ENST00000543082 PON1P27169 355 aa10.47□□□□□ -0.73
TCF4-208ENST00000543082 COPB2P35606 906 aa10.47□□□□□ -0.73
TCF4-208ENST00000543082 CHRNDQ07001 517 aa10.47□□□□□ -0.73
TCF4-208ENST00000543082 DYNC1I2Q13409 638 aaKnown RBP10.47□□□□□ -0.73
TCF4-208ENST00000543082 MTFR1Q15390 333 aa10.47□□□□□ -0.73
TCF4-208ENST00000543082 TMEM154Q6P9G4 183 aa10.47□□□□□ -0.73
TCF4-208ENST00000543082 POTEEQ6S8J3 1075 aa10.47□□□□□ -0.73
TCF4-208ENST00000543082 KCNK18Q7Z418 384 aa10.47□□□□□ -0.73
TCF4-208ENST00000543082 ADAT2Q7Z6V5 191 aaKnown RBP10.47□□□□□ -0.73
TCF4-208ENST00000543082 PROSER2Q86WR7 435 aaPredicted RBP10.47□□□□□ -0.73
TCF4-208ENST00000543082 REXO1Q8N1G1 1221 aaKnown RBP10.47□□□□□ -0.73
TCF4-208ENST00000543082 SLC35G2Q8TBE7 412 aa10.47□□□□□ -0.73
TCF4-208ENST00000543082 DNAJC9Q8WXX5 260 aa10.47□□□□□ -0.73
TCF4-208ENST00000543082 CTNNBL1Q8WYA6 563 aaPredicted RBP10.47□□□□□ -0.73
TCF4-208ENST00000543082 MAGEB18Q96M61 343 aa10.47□□□□□ -0.73
TCF4-208ENST00000543082 SYT15Q9BQS2 421 aa10.47□□□□□ -0.73
TCF4-208ENST00000543082 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.47□□□□□ -0.73
TCF4-208ENST00000543082 ARMCX3Q9UH62 379 aaPredicted RBP10.47□□□□□ -0.73
TCF4-208ENST00000543082 PPP1R9AQ9ULJ8 1098 aa10.47□□□□□ -0.73
TCF4-208ENST00000543082 ROBO3Q96MS0 1386 aa10.47□□□□□ -0.73
TCF4-208ENST00000543082 POTEMA6NI47 508 aa10.47□□□□□ -0.73
TCF4-208ENST00000543082 GSTA2P09210 222 aa10.47□□□□□ -0.73
TCF4-208ENST00000543082 ALAS1P13196 640 aa10.47□□□□□ -0.73
TCF4-208ENST00000543082 VCAM1P19320 739 aa10.47□□□□□ -0.73
TCF4-208ENST00000543082 STX2P32856 288 aa10.47□□□□□ -0.73
TCF4-208ENST00000543082 TUBP50607 506 aa10.47□□□□□ -0.73
TCF4-208ENST00000543082 CUL3Q13618 768 aa10.47□□□□□ -0.73
TCF4-208ENST00000543082 FAM43BQ6ZT52 329 aaPredicted RBP10.47□□□□□ -0.73
TCF4-208ENST00000543082 CYFIP1Q7L576 1253 aa10.47□□□□□ -0.73
TCF4-208ENST00000543082 MAEAQ7L5Y9 396 aa10.47□□□□□ -0.73
TCF4-208ENST00000543082 ECHDC2Q86YB7 292 aa10.47□□□□□ -0.73
TCF4-208ENST00000543082 RPUSD2Q8IZ73 545 aaKnown RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms