RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 GPRC5CQ9NQ84 441 aa10.26□□□□□ -0.77
SNHG1-215ENST00000540904 RGS18Q9NS28 235 aa10.26□□□□□ -0.77
SNHG1-215ENST00000540904 DNM3Q9UQ16 869 aa10.26□□□□□ -0.77
SNHG1-215ENST00000540904 SIP14410 1827 aa10.26□□□□□ -0.77
SNHG1-215ENST00000540904 LINC01553A4QN01 128 aa10.25□□□□□ -0.77
SNHG1-215ENST00000540904 C9IYK1 514 aa10.25□□□□□ -0.77
SNHG1-215ENST00000540904 E9PMD0 336 aa10.25□□□□□ -0.77
SNHG1-215ENST00000540904 STAG3L1P0CL83 205 aa10.25□□□□□ -0.77
SNHG1-215ENST00000540904 ZSCAN22P10073 491 aaPredicted RBP10.25□□□□□ -0.77
SNHG1-215ENST00000540904 ZSCAN20P17040 1043 aaPredicted RBP10.25□□□□□ -0.77
SNHG1-215ENST00000540904 CYP11B2P19099 503 aa10.25□□□□□ -0.77
SNHG1-215ENST00000540904 MARCKSP29966 332 aaPredicted RBP10.25□□□□□ -0.77
SNHG1-215ENST00000540904 ARL2P36404 184 aa10.25□□□□□ -0.77
SNHG1-215ENST00000540904 PHKA2P46019 1235 aa10.25□□□□□ -0.77
SNHG1-215ENST00000540904 SARSP49591 514 aaKnown RBP10.25□□□□□ -0.77
SNHG1-215ENST00000540904 HTRA4P83105 476 aaPredicted RBP10.25□□□□□ -0.77
SNHG1-215ENST00000540904 GRIN1Q05586 938 aa10.25□□□□□ -0.77
SNHG1-215ENST00000540904 TFDP1Q14186 410 aa10.25□□□□□ -0.77
SNHG1-215ENST00000540904 DSC3Q14574 896 aa10.25□□□□□ -0.77
SNHG1-215ENST00000540904 FAM102BQ5T8I3 360 aa10.25□□□□□ -0.77
SNHG1-215ENST00000540904 FAM43BQ6ZT52 329 aaPredicted RBP10.25□□□□□ -0.77
SNHG1-215ENST00000540904 SLC24A5Q71RS6 500 aa10.25□□□□□ -0.77
SNHG1-215ENST00000540904 CATSPER4Q7RTX7 472 aa10.25□□□□□ -0.77
SNHG1-215ENST00000540904 MCPH1Q8NEM0 835 aa10.25□□□□□ -0.77
SNHG1-215ENST00000540904 ASAP3Q8TDY4 903 aa10.25□□□□□ -0.77
SNHG1-215ENST00000540904 CDK5RAP3Q96JB5 506 aa10.25□□□□□ -0.77
SNHG1-215ENST00000540904 AK8Q96MA6 479 aa10.25□□□□□ -0.77
SNHG1-215ENST00000540904 C1orf112Q9NSG2 853 aa10.25□□□□□ -0.77
SNHG1-215ENST00000540904 MTUS1Q9ULD2 1270 aa10.25□□□□□ -0.77
SNHG1-215ENST00000540904 LRFN2Q9ULH4 789 aa10.25□□□□□ -0.77
SNHG1-215ENST00000540904 PCDHB7Q9Y5E2 793 aa10.25□□□□□ -0.77
SNHG1-215ENST00000540904 EPOPA6NHQ4 379 aa10.24□□□□□ -0.77
SNHG1-215ENST00000540904 LRRIQ4A6NIV6 560 aa10.24□□□□□ -0.77
SNHG1-215ENST00000540904 RFXAPO00287 272 aa10.24□□□□□ -0.77
SNHG1-215ENST00000540904 DGKIO75912 1065 aa10.24□□□□□ -0.77
SNHG1-215ENST00000540904 EYA4O95677 639 aa10.24□□□□□ -0.77
SNHG1-215ENST00000540904 SSBP05455 408 aaKnown RBP eCLIP10.24□□□□□ -0.77
SNHG1-215ENST00000540904 PDIA4P13667 645 aaKnown RBP10.24□□□□□ -0.77
SNHG1-215ENST00000540904 FOSL2P15408 326 aa10.24□□□□□ -0.77
SNHG1-215ENST00000540904 GLRA2P23416 452 aa10.24□□□□□ -0.77
SNHG1-215ENST00000540904 LONP1P36776 959 aaKnown RBP10.24□□□□□ -0.77
SNHG1-215ENST00000540904 UBA7P41226 1012 aa10.24□□□□□ -0.77
SNHG1-215ENST00000540904 PKP1Q13835 747 aa10.24□□□□□ -0.77
SNHG1-215ENST00000540904 CAPSQ13938 189 aa10.24□□□□□ -0.77
SNHG1-215ENST00000540904 PTPAQ15257 358 aa10.24□□□□□ -0.77
SNHG1-215ENST00000540904 FOXD4L6Q3SYB3 417 aaPredicted RBP10.24□□□□□ -0.77
SNHG1-215ENST00000540904 PAN2Q504Q3 1202 aaKnown RBP10.24□□□□□ -0.77
SNHG1-215ENST00000540904 FOXD4L3Q6VB84 417 aaPredicted RBP10.24□□□□□ -0.77
SNHG1-215ENST00000540904 KCNK18Q7Z418 384 aa10.24□□□□□ -0.77
SNHG1-215ENST00000540904 SRGAP1Q7Z6B7 1085 aa10.24□□□□□ -0.77
SNHG1-215ENST00000540904 CABP7Q86V35 215 aa10.24□□□□□ -0.77
SNHG1-215ENST00000540904 CRIPAKQ8N1N5 446 aa10.24□□□□□ -0.77
SNHG1-215ENST00000540904 RNF169Q8NCN4 708 aa10.24□□□□□ -0.77
SNHG1-215ENST00000540904 RASSF8Q8NHQ8 419 aa10.24□□□□□ -0.77
SNHG1-215ENST00000540904 TGS1Q96RS0 853 aaKnown RBP10.24□□□□□ -0.77
SNHG1-215ENST00000540904 USP28Q96RU2 1077 aa10.24□□□□□ -0.77
SNHG1-215ENST00000540904 GAS2L1Q99501 681 aaPredicted RBP10.24□□□□□ -0.77
SNHG1-215ENST00000540904 NT5C3AQ9H0P0 336 aa10.24□□□□□ -0.77
SNHG1-215ENST00000540904 MINDY3Q9H8M7 445 aa10.24□□□□□ -0.77
SNHG1-215ENST00000540904 POLD4Q9HCU8 107 aa10.24□□□□□ -0.77
SNHG1-215ENST00000540904 DACT1Q9NYF0 836 aa10.24□□□□□ -0.77
SNHG1-215ENST00000540904 PIN4Q9Y237 131 aaKnown RBP10.24□□□□□ -0.77
SNHG1-215ENST00000540904 STXBP5LQ9Y2K9 1186 aa10.24□□□□□ -0.77
SNHG1-215ENST00000540904 WDR81Q562E7 1941 aa10.24□□□□□ -0.77
SNHG1-215ENST00000540904 EVPLQ92817 2033 aa10.24□□□□□ -0.77
SNHG1-215ENST00000540904 INO80B-WBP1J3KQ70 363 aa10.23□□□□□ -0.77
SNHG1-215ENST00000540904 ERLIN2O94905 339 aa10.23□□□□□ -0.77
SNHG1-215ENST00000540904 F13A1P00488 732 aa10.23□□□□□ -0.77
SNHG1-215ENST00000540904 FGFR1P11362 822 aa10.23□□□□□ -0.77
SNHG1-215ENST00000540904 IGFBP4P22692 258 aa10.23□□□□□ -0.77
SNHG1-215ENST00000540904 GATMP50440 423 aa10.23□□□□□ -0.77
SNHG1-215ENST00000540904 CLCN6P51797 869 aa10.23□□□□□ -0.77
SNHG1-215ENST00000540904 PTENP60484 403 aa10.23□□□□□ -0.77
SNHG1-215ENST00000540904 ERVK-21P61565 698 aa10.23□□□□□ -0.77
SNHG1-215ENST00000540904 FAM189BP81408 668 aa10.23□□□□□ -0.77
SNHG1-215ENST00000540904 POU5F1BQ06416 359 aa10.23□□□□□ -0.77
SNHG1-215ENST00000540904 GRB10Q13322 594 aa10.23□□□□□ -0.77
SNHG1-215ENST00000540904 BTG3Q14201 252 aaPredicted RBP10.23□□□□□ -0.77
SNHG1-215ENST00000540904 BECN1Q14457 450 aa10.23□□□□□ -0.77
SNHG1-215ENST00000540904 SPECC1Q5M775 1068 aa10.23□□□□□ -0.77
SNHG1-215ENST00000540904 HYIQ5T013 277 aa10.23□□□□□ -0.77
SNHG1-215ENST00000540904 TWF2Q6IBS0 349 aaKnown RBP10.23□□□□□ -0.77
SNHG1-215ENST00000540904 ECHDC2Q86YB7 292 aa10.23□□□□□ -0.77
SNHG1-215ENST00000540904 FIBCD1Q8N539 461 aa10.23□□□□□ -0.77
SNHG1-215ENST00000540904 ZNF689Q96CS4 500 aaPredicted RBP10.23□□□□□ -0.77
SNHG1-215ENST00000540904 CALML4Q96GE6 196 aa10.23□□□□□ -0.77
SNHG1-215ENST00000540904 ZNF396Q96N95 335 aaPredicted RBP10.23□□□□□ -0.77
SNHG1-215ENST00000540904 PNMA5Q96PV4 448 aa10.23□□□□□ -0.77
SNHG1-215ENST00000540904 C17orf80Q9BSJ5 609 aa10.23□□□□□ -0.77
SNHG1-215ENST00000540904 RUSC1Q9BVN2 902 aa10.23□□□□□ -0.77
SNHG1-215ENST00000540904 CSRNP2Q9H175 543 aa10.23□□□□□ -0.77
SNHG1-215ENST00000540904 CHST12Q9NRB3 414 aa10.23□□□□□ -0.77
SNHG1-215ENST00000540904 AGPAT5Q9NUQ2 364 aa10.23□□□□□ -0.77
SNHG1-215ENST00000540904 TMEM161AQ9NX61 479 aa10.23□□□□□ -0.77
SNHG1-215ENST00000540904 TFIP11Q9UBB9 837 aaKnown RBP10.23□□□□□ -0.77
SNHG1-215ENST00000540904 DAXXQ9UER7 740 aaPredicted RBP10.23□□□□□ -0.77
SNHG1-215ENST00000540904 FBXO2Q9UK22 296 aaPredicted RBP10.23□□□□□ -0.77
SNHG1-215ENST00000540904 SRPRBQ9Y5M8 271 aaKnown RBP10.23□□□□□ -0.77
SNHG1-215ENST00000540904 ADGRA3Q8IWK6 1321 aa10.23□□□□□ -0.77
SNHG1-215ENST00000540904 MICAL3Q7RTP6 2002 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms