RNA–Protein interactions for RNA: ENST00000540804.5

MSRB3-209, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 2 BASIC

Gene MSRB3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-209ENST00000540804 TLE6Q9H808 572 aa16.24■□□□□ 0.19
MSRB3-209ENST00000540804 CYP26B1Q9NR63 512 aa16.24■□□□□ 0.19
MSRB3-209ENST00000540804 TLR9Q9NR96 1032 aa16.24■□□□□ 0.19
MSRB3-209ENST00000540804 AAASQ9NRG9 546 aa16.24■□□□□ 0.19
MSRB3-209ENST00000540804 CD207Q9UJ71 328 aa16.24■□□□□ 0.19
MSRB3-209ENST00000540804 BRWD1Q9NSI6 2320 aa16.23■□□□□ 0.19
MSRB3-209ENST00000540804 PLXNA4Q9HCM2 1894 aa16.23■□□□□ 0.19
MSRB3-209ENST00000540804 A0A0U1RQF3 1178 aa16.23■□□□□ 0.19
MSRB3-209ENST00000540804 MEIS3P2A8K0S8 358 aa16.23■□□□□ 0.19
MSRB3-209ENST00000540804 NT5C1B-RDH14C9J2C7 533 aa16.23■□□□□ 0.19
MSRB3-209ENST00000540804 XBP1P17861 261 aa16.23■□□□□ 0.19
MSRB3-209ENST00000540804 LAG3P18627 525 aa16.23■□□□□ 0.19
MSRB3-209ENST00000540804 KRT2P35908 639 aa16.23■□□□□ 0.19
MSRB3-209ENST00000540804 CYP4A11Q02928 519 aa16.23■□□□□ 0.19
MSRB3-209ENST00000540804 ANKRD1Q15327 319 aa16.23■□□□□ 0.19
MSRB3-209ENST00000540804 SMAD2Q15796 467 aaKnown RBP16.23■□□□□ 0.19
MSRB3-209ENST00000540804 KCNT2Q6UVM3 1135 aa16.23■□□□□ 0.19
MSRB3-209ENST00000540804 ADHFE1Q8IWW8 467 aa16.23■□□□□ 0.19
MSRB3-209ENST00000540804 TMEM143Q96AN5 459 aa16.23■□□□□ 0.19
MSRB3-209ENST00000540804 FAM20AQ96MK3 541 aa16.23■□□□□ 0.19
MSRB3-209ENST00000540804 A0A087WWV3 80 aa16.22■□□□□ 0.19
MSRB3-209ENST00000540804 C19orf67A6NJJ6 358 aa16.22■□□□□ 0.19
MSRB3-209ENST00000540804 HIDE1A8MVS5 230 aa16.22■□□□□ 0.19
MSRB3-209ENST00000540804 BTBD18B2RXH4 712 aa16.22■□□□□ 0.19
MSRB3-209ENST00000540804 FSCN2O14926 492 aa16.22■□□□□ 0.19
MSRB3-209ENST00000540804 MARCH6O60337 910 aa16.22■□□□□ 0.19
MSRB3-209ENST00000540804 P4HBP07237 508 aaKnown RBP16.22■□□□□ 0.19
MSRB3-209ENST00000540804 GCFC2P16383 781 aaKnown RBP16.22■□□□□ 0.19
MSRB3-209ENST00000540804 DNM2P50570 870 aa16.22■□□□□ 0.19
MSRB3-209ENST00000540804 NEK4P51957 841 aa16.22■□□□□ 0.19
MSRB3-209ENST00000540804 SPIRE1Q08AE8 756 aa16.22■□□□□ 0.19
MSRB3-209ENST00000540804 SMAD4Q13485 552 aaKnown RBP16.22■□□□□ 0.19
MSRB3-209ENST00000540804 EPHA7Q15375 998 aa16.22■□□□□ 0.19
MSRB3-209ENST00000540804 ABI1Q8IZP0 508 aa16.22■□□□□ 0.19
MSRB3-209ENST00000540804 MRPS27Q92552 414 aaKnown RBP16.22■□□□□ 0.19
MSRB3-209ENST00000540804 CEP170P1Q96L14 293 aa16.22■□□□□ 0.19
MSRB3-209ENST00000540804 LXNQ9BS40 222 aa16.22■□□□□ 0.19
MSRB3-209ENST00000540804 MINDY3Q9H8M7 445 aa16.22■□□□□ 0.19
MSRB3-209ENST00000540804 IFT122Q9HBG6 1241 aa16.22■□□□□ 0.19
MSRB3-209ENST00000540804 RNF216Q9NWF9 866 aaPredicted RBP16.22■□□□□ 0.19
MSRB3-209ENST00000540804 PIN4Q9Y237 131 aaKnown RBP16.22■□□□□ 0.19
MSRB3-209ENST00000540804 FNDC1Q4ZHG4 1894 aaPredicted RBP16.22■□□□□ 0.19
MSRB3-209ENST00000540804 MYO7AQ13402 2215 aa16.22■□□□□ 0.19
MSRB3-209ENST00000540804 C5orf42Q9H799 3197 aa16.22■□□□□ 0.19
MSRB3-209ENST00000540804 MYH9P35579 1960 aaKnown RBP16.21■□□□□ 0.19
MSRB3-209ENST00000540804 GPR37L1O60883 481 aa16.21■□□□□ 0.19
MSRB3-209ENST00000540804 GUCY1B3Q02153 619 aa16.21■□□□□ 0.19
MSRB3-209ENST00000540804 UBE3AQ05086 875 aa16.21■□□□□ 0.19
MSRB3-209ENST00000540804 FAM43BQ6ZT52 329 aaPredicted RBP16.21■□□□□ 0.19
MSRB3-209ENST00000540804 LRRC43Q8N309 656 aa16.21■□□□□ 0.19
MSRB3-209ENST00000540804 WASF1Q92558 559 aa16.21■□□□□ 0.19
MSRB3-209ENST00000540804 PPP2R3CQ969Q6 453 aa16.21■□□□□ 0.19
MSRB3-209ENST00000540804 ZNF558Q96NG5 402 aa16.21■□□□□ 0.19
MSRB3-209ENST00000540804 TCF25Q9BQ70 676 aa16.21■□□□□ 0.19
MSRB3-209ENST00000540804 FAM50BQ9Y247 325 aa16.21■□□□□ 0.19
MSRB3-209ENST00000540804 TBX3O15119 743 aa16.2■□□□□ 0.18
MSRB3-209ENST00000540804 HOXA2O43364 376 aa16.2■□□□□ 0.18
MSRB3-209ENST00000540804 SLITRK3O94933 977 aa16.2■□□□□ 0.18
MSRB3-209ENST00000540804 EYA4O95677 639 aa16.2■□□□□ 0.18
MSRB3-209ENST00000540804 SRGAP2CP0DJJ0 459 aa16.2■□□□□ 0.18
MSRB3-209ENST00000540804 YWHABP31946 246 aaKnown RBP16.2■□□□□ 0.18
MSRB3-209ENST00000540804 PHKA2P46019 1235 aa16.2■□□□□ 0.18
MSRB3-209ENST00000540804 POLGP54098 1239 aaPredicted RBP16.2■□□□□ 0.18
MSRB3-209ENST00000540804 PLCB3Q01970 1234 aa16.2■□□□□ 0.18
MSRB3-209ENST00000540804 DUSP6Q16828 381 aa16.2■□□□□ 0.18
MSRB3-209ENST00000540804 TWF2Q6IBS0 349 aaKnown RBP16.2■□□□□ 0.18
MSRB3-209ENST00000540804 LLGL2Q6P1M3 1020 aa16.2■□□□□ 0.18
MSRB3-209ENST00000540804 CATSPER4Q7RTX7 472 aa16.2■□□□□ 0.18
MSRB3-209ENST00000540804 ZNF410Q86VK4 478 aa16.2■□□□□ 0.18
MSRB3-209ENST00000540804 TMEM173Q86WV6 379 aaPredicted RBP16.2■□□□□ 0.18
MSRB3-209ENST00000540804 DIS3L2Q8IYB7 885 aaKnown RBP16.2■□□□□ 0.18
MSRB3-209ENST00000540804 SLC39A11Q8N1S5 342 aa16.2■□□□□ 0.18
MSRB3-209ENST00000540804 ZNF710Q8N1W2 664 aa16.2■□□□□ 0.18
MSRB3-209ENST00000540804 PRPF31Q8WWY3 499 aaKnown RBP16.2■□□□□ 0.18
MSRB3-209ENST00000540804 APOL5Q9BWW9 433 aa16.2■□□□□ 0.18
MSRB3-209ENST00000540804 DHX33Q9H6R0 707 aaKnown RBP16.2■□□□□ 0.18
MSRB3-209ENST00000540804 ENTPD7Q9NQZ7 604 aa16.2■□□□□ 0.18
MSRB3-209ENST00000540804 PRKAG3Q9UGI9 489 aa16.2■□□□□ 0.18
MSRB3-209ENST00000540804 COL4A3BPQ9Y5P4 624 aa16.2■□□□□ 0.18
MSRB3-209ENST00000540804 EOMESO95936 686 aa16.19■□□□□ 0.18
MSRB3-209ENST00000540804 SFPQP23246 707 aaKnown RBP eCLIP16.19■□□□□ 0.18
MSRB3-209ENST00000540804 AFF1P51825 1210 aaKnown RBP16.19■□□□□ 0.18
MSRB3-209ENST00000540804 BCAR1P56945 870 aa16.19■□□□□ 0.18
MSRB3-209ENST00000540804 COASYQ13057 564 aa16.19■□□□□ 0.18
MSRB3-209ENST00000540804 XKR9Q5GH70 373 aa16.19■□□□□ 0.18
MSRB3-209ENST00000540804 TPH2Q8IWU9 490 aa16.19■□□□□ 0.18
MSRB3-209ENST00000540804 C4orf19Q8IY42 314 aa16.19■□□□□ 0.18
MSRB3-209ENST00000540804 SMRP1Q8NCR6 262 aa16.19■□□□□ 0.18
MSRB3-209ENST00000540804 BCL7CQ8WUZ0 217 aaPredicted RBP16.19■□□□□ 0.18
MSRB3-209ENST00000540804 SLC7A3Q8WY07 619 aa16.19■□□□□ 0.18
MSRB3-209ENST00000540804 CHST12Q9NRB3 414 aa16.19■□□□□ 0.18
MSRB3-209ENST00000540804 FAM105AQ9NUU6 356 aa16.19■□□□□ 0.18
MSRB3-209ENST00000540804 DACT1Q9NYF0 836 aa16.19■□□□□ 0.18
MSRB3-209ENST00000540804 SPG21Q9NZD8 308 aa16.19■□□□□ 0.18
MSRB3-209ENST00000540804 MUTYHQ9UIF7 546 aa16.19■□□□□ 0.18
MSRB3-209ENST00000540804 CDH22Q9UJ99 828 aa16.19■□□□□ 0.18
MSRB3-209ENST00000540804 INPP5FQ9Y2H2 1132 aa16.19■□□□□ 0.18
MSRB3-209ENST00000540804 USP15Q9Y4E8 981 aaPredicted RBP16.19■□□□□ 0.18
MSRB3-209ENST00000540804 WDR81Q562E7 1941 aa16.19■□□□□ 0.18
MSRB3-209ENST00000540804 DCXO43602 365 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms