RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 TBCKQ8TEA7 893 aa13.52□□□□□ -0.25
CBX3P4-202ENST00000540428 NLRP7Q8WX94 980 aa13.52□□□□□ -0.25
CBX3P4-202ENST00000540428 CEP89Q96ST8 783 aa13.52□□□□□ -0.25
CBX3P4-202ENST00000540428 INO80BQ9C086 356 aaPredicted RBP13.52□□□□□ -0.25
CBX3P4-202ENST00000540428 PCDHA4Q9UN74 947 aa13.52□□□□□ -0.25
CBX3P4-202ENST00000540428 C5orf42Q9H799 3197 aa13.51□□□□□ -0.25
CBX3P4-202ENST00000540428 SKIP12755 728 aa13.51□□□□□ -0.25
CBX3P4-202ENST00000540428 SFPQP23246 707 aaKnown RBP eCLIP13.51□□□□□ -0.25
CBX3P4-202ENST00000540428 PBX3P40426 434 aa13.51□□□□□ -0.25
CBX3P4-202ENST00000540428 ALDH7A1P49419 539 aaKnown RBP13.51□□□□□ -0.25
CBX3P4-202ENST00000540428 DNM2P50570 870 aa13.51□□□□□ -0.25
CBX3P4-202ENST00000540428 CCT2P78371 535 aaKnown RBP13.51□□□□□ -0.25
CBX3P4-202ENST00000540428 ITIH3Q06033 890 aa13.51□□□□□ -0.25
CBX3P4-202ENST00000540428 GALNT17Q6IS24 598 aa13.51□□□□□ -0.25
CBX3P4-202ENST00000540428 ZNF410Q86VK4 478 aa13.51□□□□□ -0.25
CBX3P4-202ENST00000540428 DAGLBQ8NCG7 672 aa13.51□□□□□ -0.25
CBX3P4-202ENST00000540428 RNF169Q8NCN4 708 aa13.51□□□□□ -0.25
CBX3P4-202ENST00000540428 HELQQ8TDG4 1101 aa13.51□□□□□ -0.25
CBX3P4-202ENST00000540428 ASIC4Q96FT7 647 aa13.51□□□□□ -0.25
CBX3P4-202ENST00000540428 ZNF668Q96K58 619 aaPredicted RBP13.51□□□□□ -0.25
CBX3P4-202ENST00000540428 MBOAT7Q96N66 472 aa13.51□□□□□ -0.25
CBX3P4-202ENST00000540428 NECTIN4Q96NY8 510 aa13.51□□□□□ -0.25
CBX3P4-202ENST00000540428 SEPT9Q9UHD8 586 aaPredicted RBP13.51□□□□□ -0.25
CBX3P4-202ENST00000540428 HCFC2Q9Y5Z7 792 aa13.51□□□□□ -0.25
CBX3P4-202ENST00000540428 MYH9P35579 1960 aaKnown RBP13.51□□□□□ -0.25
CBX3P4-202ENST00000540428 C2orf71A6NGG8 1288 aa13.5□□□□□ -0.25
CBX3P4-202ENST00000540428 M0R2N6 131 aa13.5□□□□□ -0.25
CBX3P4-202ENST00000540428 STBD1O95210 358 aa13.5□□□□□ -0.25
CBX3P4-202ENST00000540428 DEXIO95424 95 aa13.5□□□□□ -0.25
CBX3P4-202ENST00000540428 FGFR4P22455 802 aa13.5□□□□□ -0.25
CBX3P4-202ENST00000540428 PHKA2P46019 1235 aa13.5□□□□□ -0.25
CBX3P4-202ENST00000540428 SSRP1Q08945 709 aaKnown RBP13.5□□□□□ -0.25
CBX3P4-202ENST00000540428 DRP2Q13474 957 aa13.5□□□□□ -0.25
CBX3P4-202ENST00000540428 GIT2Q14161 759 aa13.5□□□□□ -0.25
CBX3P4-202ENST00000540428 MTERF2Q49AM1 385 aa13.5□□□□□ -0.25
CBX3P4-202ENST00000540428 CES5AQ6NT32 575 aa13.5□□□□□ -0.25
CBX3P4-202ENST00000540428 LLGL2Q6P1M3 1020 aa13.5□□□□□ -0.25
CBX3P4-202ENST00000540428 RUFY3Q7L099 469 aa13.5□□□□□ -0.25
CBX3P4-202ENST00000540428 PRSS33Q8NF86 280 aa13.5□□□□□ -0.25
CBX3P4-202ENST00000540428 ETNPPLQ8TBG4 499 aa13.5□□□□□ -0.25
CBX3P4-202ENST00000540428 TMEM169Q96HH4 297 aa13.5□□□□□ -0.25
CBX3P4-202ENST00000540428 JPH2Q9BR39 696 aaPredicted RBP13.5□□□□□ -0.25
CBX3P4-202ENST00000540428 ADAM7Q9H2U9 754 aa13.5□□□□□ -0.25
CBX3P4-202ENST00000540428 NCOA5Q9HCD5 579 aaKnown RBP13.5□□□□□ -0.25
CBX3P4-202ENST00000540428 NR2E1Q9Y466 385 aa13.5□□□□□ -0.25
CBX3P4-202ENST00000540428 IRAK3Q9Y616 596 aa13.5□□□□□ -0.25
CBX3P4-202ENST00000540428 CLASP2O75122 1294 aaKnown RBP13.49□□□□□ -0.25
CBX3P4-202ENST00000540428 ZNF623O75123 536 aa13.49□□□□□ -0.25
CBX3P4-202ENST00000540428 MAFO75444 373 aaPredicted RBP13.49□□□□□ -0.25
CBX3P4-202ENST00000540428 TDP2O95551 362 aa13.49□□□□□ -0.25
CBX3P4-202ENST00000540428 RAB27AP51159 221 aa13.49□□□□□ -0.25
CBX3P4-202ENST00000540428 POLGP54098 1239 aaPredicted RBP13.49□□□□□ -0.25
CBX3P4-202ENST00000540428 BCAR1P56945 870 aa13.49□□□□□ -0.25
CBX3P4-202ENST00000540428 TOB2Q14106 344 aaPredicted RBP13.49□□□□□ -0.25
CBX3P4-202ENST00000540428 IER5LQ5T953 404 aa13.49□□□□□ -0.25
CBX3P4-202ENST00000540428 BLIDQ8IZY5 108 aa13.49□□□□□ -0.25
CBX3P4-202ENST00000540428 GJA10Q969M2 543 aa13.49□□□□□ -0.25
CBX3P4-202ENST00000540428 ZNF274Q96GC6 653 aaPredicted RBP13.49□□□□□ -0.25
CBX3P4-202ENST00000540428 ZBP1Q9H171 429 aa13.49□□□□□ -0.25
CBX3P4-202ENST00000540428 ZSWIM6Q9HCJ5 1215 aa13.49□□□□□ -0.25
CBX3P4-202ENST00000540428 A0A087WZ62 844 aa13.48□□□□□ -0.25
CBX3P4-202ENST00000540428 CPLX1O14810 134 aa13.48□□□□□ -0.25
CBX3P4-202ENST00000540428 DKC1O60832 514 aaKnown RBP eCLIP13.48□□□□□ -0.25
CBX3P4-202ENST00000540428 CSDE1O75534 798 aaKnown RBP13.48□□□□□ -0.25
CBX3P4-202ENST00000540428 MTHFRP42898 656 aa13.48□□□□□ -0.25
CBX3P4-202ENST00000540428 NUBP1P53384 320 aa13.48□□□□□ -0.25
CBX3P4-202ENST00000540428 PSMC5P62195 406 aa13.48□□□□□ -0.25
CBX3P4-202ENST00000540428 NONOQ15233 471 aaKnown RBP eCLIP13.48□□□□□ -0.25
CBX3P4-202ENST00000540428 TWF2Q6IBS0 349 aaKnown RBP13.48□□□□□ -0.25
CBX3P4-202ENST00000540428 CPLX2Q6PUV4 134 aaKnown RBP13.48□□□□□ -0.25
CBX3P4-202ENST00000540428 UBALD2Q8IYN6 164 aa13.48□□□□□ -0.25
CBX3P4-202ENST00000540428 FDXACB1Q9BRP7 624 aaPredicted RBP13.48□□□□□ -0.25
CBX3P4-202ENST00000540428 APOL5Q9BWW9 433 aa13.48□□□□□ -0.25
CBX3P4-202ENST00000540428 IRF2BPLQ9H1B7 796 aa13.48□□□□□ -0.25
CBX3P4-202ENST00000540428 FAM105AQ9NUU6 356 aa13.48□□□□□ -0.25
CBX3P4-202ENST00000540428 DZANK1Q9NVP4 752 aa13.48□□□□□ -0.25
CBX3P4-202ENST00000540428 SUCLA2Q9P2R7 463 aaPredicted RBP13.48□□□□□ -0.25
CBX3P4-202ENST00000540428 STK39Q9UEW8 545 aa13.48□□□□□ -0.25
CBX3P4-202ENST00000540428 PPME1Q9Y570 386 aa13.48□□□□□ -0.25
CBX3P4-202ENST00000540428 TMEM150BA6NC51 233 aa13.47□□□□□ -0.25
CBX3P4-202ENST00000540428 NT5C1B-RDH14C9J2C7 533 aa13.47□□□□□ -0.25
CBX3P4-202ENST00000540428 ZC3H11AO75152 810 aaKnown RBP eCLIP13.47□□□□□ -0.25
CBX3P4-202ENST00000540428 CXCL14O95715 111 aa13.47□□□□□ -0.25
CBX3P4-202ENST00000540428 CTSAP10619 480 aa13.47□□□□□ -0.25
CBX3P4-202ENST00000540428 TCF15Q12870 199 aa13.47□□□□□ -0.25
CBX3P4-202ENST00000540428 NPY5RQ15761 445 aa13.47□□□□□ -0.25
CBX3P4-202ENST00000540428 GLB1LQ6UWU2 654 aa13.47□□□□□ -0.25
CBX3P4-202ENST00000540428 ANO5Q75V66 913 aa13.47□□□□□ -0.25
CBX3P4-202ENST00000540428 KRT25Q7Z3Z0 450 aa13.47□□□□□ -0.25
CBX3P4-202ENST00000540428 ZBTB33Q86T24 672 aa13.47□□□□□ -0.25
CBX3P4-202ENST00000540428 DDX53Q86TM3 631 aaKnown RBP13.47□□□□□ -0.25
CBX3P4-202ENST00000540428 RHPN2Q8IUC4 686 aa13.47□□□□□ -0.25
CBX3P4-202ENST00000540428 EXOC8Q8IYI6 725 aa13.47□□□□□ -0.25
CBX3P4-202ENST00000540428 VPS52Q8N1B4 723 aa13.47□□□□□ -0.25
CBX3P4-202ENST00000540428 PGBD4Q96DM1 585 aa13.47□□□□□ -0.25
CBX3P4-202ENST00000540428 IGSF21Q96ID5 467 aa13.47□□□□□ -0.25
CBX3P4-202ENST00000540428 RIPOR3Q96MK2 946 aa13.47□□□□□ -0.25
CBX3P4-202ENST00000540428 TM6SF1Q9BZW5 370 aa13.47□□□□□ -0.25
CBX3P4-202ENST00000540428 POMKQ9H5K3 350 aa13.47□□□□□ -0.25
CBX3P4-202ENST00000540428 NRDE2Q9H7Z3 1164 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms