RNA–Protein interactions for RNA: ENST00000540057.1

C2CD3-214, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 4

Gene C2CD3, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-214ENST00000540057 ROBO3Q96MS0 1386 aa4.82□□□□□ -1.64
C2CD3-214ENST00000540057 CDK5RAP2Q96SN8 1893 aa4.82□□□□□ -1.64
C2CD3-214ENST00000540057 MROH7-TTC4A0A0A0MT08 1334 aa4.82□□□□□ -1.64
C2CD3-214ENST00000540057 UMODL1Q5DID0 1318 aa4.82□□□□□ -1.64
C2CD3-214ENST00000540057 MROH7Q68CQ1 1323 aa4.82□□□□□ -1.64
C2CD3-214ENST00000540057 BRWD1Q9NSI6 2320 aa4.82□□□□□ -1.64
C2CD3-214ENST00000540057 DNAJC25-GNG10A0A024R161 153 aa4.82□□□□□ -1.64
C2CD3-214ENST00000540057 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.82□□□□□ -1.64
C2CD3-214ENST00000540057 PATL2C9JE40 543 aaKnown RBP4.82□□□□□ -1.64
C2CD3-214ENST00000540057 STRNO43815 780 aa4.82□□□□□ -1.64
C2CD3-214ENST00000540057 LPXNO60711 386 aa4.82□□□□□ -1.64
C2CD3-214ENST00000540057 KRT37O76014 449 aa4.82□□□□□ -1.64
C2CD3-214ENST00000540057 KRT1P04264 644 aa4.82□□□□□ -1.64
C2CD3-214ENST00000540057 CYP7A1P22680 504 aa4.82□□□□□ -1.64
C2CD3-214ENST00000540057 ST13P50502 369 aaKnown RBP4.82□□□□□ -1.64
C2CD3-214ENST00000540057 RPL6Q02878 288 aaKnown RBP4.82□□□□□ -1.64
C2CD3-214ENST00000540057 GRB10Q13322 594 aa4.82□□□□□ -1.64
C2CD3-214ENST00000540057 ZYXQ15942 572 aaKnown RBP4.82□□□□□ -1.64
C2CD3-214ENST00000540057 KCNA10Q16322 511 aa4.82□□□□□ -1.64
C2CD3-214ENST00000540057 PKN1Q16512 942 aa4.82□□□□□ -1.64
C2CD3-214ENST00000540057 GAB4Q2WGN9 574 aa4.82□□□□□ -1.64
C2CD3-214ENST00000540057 RABL6Q3YEC7 729 aaPredicted RBP4.82□□□□□ -1.64
C2CD3-214ENST00000540057 LEXMQ3ZCV2 418 aa4.82□□□□□ -1.64
C2CD3-214ENST00000540057 TMEM67Q5HYA8 995 aa4.82□□□□□ -1.64
C2CD3-214ENST00000540057 RALGPS1Q5JS13 557 aa4.82□□□□□ -1.64
C2CD3-214ENST00000540057 CCSAPQ6IQ19 270 aaPredicted RBP4.82□□□□□ -1.64
C2CD3-214ENST00000540057 ERMP1Q7Z2K6 904 aa4.82□□□□□ -1.64
C2CD3-214ENST00000540057 DZIP1Q86YF9 867 aaKnown RBP4.82□□□□□ -1.64
C2CD3-214ENST00000540057 C1QL4Q86Z23 238 aa4.82□□□□□ -1.64
C2CD3-214ENST00000540057 FAM126BQ8IXS8 530 aa4.82□□□□□ -1.64
C2CD3-214ENST00000540057 KLHDC9Q8NEP7 349 aa4.82□□□□□ -1.64
C2CD3-214ENST00000540057 PIWIL2Q8TC59 973 aaKnown RBP4.82□□□□□ -1.64
C2CD3-214ENST00000540057 ZNF384Q8TF68 577 aa4.82□□□□□ -1.64
C2CD3-214ENST00000540057 NUP133Q8WUM0 1156 aa4.82□□□□□ -1.64
C2CD3-214ENST00000540057 ARNTL2Q8WYA1 636 aa4.82□□□□□ -1.64
C2CD3-214ENST00000540057 LPIN2Q92539 896 aa4.82□□□□□ -1.64
C2CD3-214ENST00000540057 VWCEQ96DN2 955 aa4.82□□□□□ -1.64
C2CD3-214ENST00000540057 MAML3Q96JK9 1138 aa4.82□□□□□ -1.64
C2CD3-214ENST00000540057 NOC4LQ9BVI4 516 aaKnown RBP4.82□□□□□ -1.64
C2CD3-214ENST00000540057 MOV10L1Q9BXT6 1211 aaKnown RBP4.82□□□□□ -1.64
C2CD3-214ENST00000540057 DUSP15Q9H1R2 295 aaPredicted RBP4.82□□□□□ -1.64
C2CD3-214ENST00000540057 BICC1Q9H694 974 aaKnown RBP4.82□□□□□ -1.64
C2CD3-214ENST00000540057 DNAJC18Q9H819 358 aa4.82□□□□□ -1.64
C2CD3-214ENST00000540057 C9orf78Q9NZ63 289 aaPredicted RBP4.82□□□□□ -1.64
C2CD3-214ENST00000540057 ZSWIM5Q9P217 1185 aa4.82□□□□□ -1.64
C2CD3-214ENST00000540057 PI4KBQ9UBF8 816 aa4.82□□□□□ -1.64
C2CD3-214ENST00000540057 DENND2AQ9ULE3 1009 aa4.82□□□□□ -1.64
C2CD3-214ENST00000540057 ZBTB21Q9ULJ3 1066 aa4.82□□□□□ -1.64
C2CD3-214ENST00000540057 SLC4A7Q9Y6M7 1214 aa4.82□□□□□ -1.64
C2CD3-214ENST00000540057 DCHS1Q96JQ0 3298 aa4.82□□□□□ -1.64
C2CD3-214ENST00000540057 ZDBF2Q9HCK1 2354 aa4.82□□□□□ -1.64
C2CD3-214ENST00000540057 ELP1O95163 1332 aa4.81□□□□□ -1.64
C2CD3-214ENST00000540057 SYNRGQ9UMZ2 1314 aa4.81□□□□□ -1.64
C2CD3-214ENST00000540057 FAM221AA4D161 298 aa4.81□□□□□ -1.64
C2CD3-214ENST00000540057 MYADML2A6NDP7 307 aa4.81□□□□□ -1.64
C2CD3-214ENST00000540057 ARVCFO00192 962 aa4.81□□□□□ -1.64
C2CD3-214ENST00000540057 APAF1O14727 1248 aa4.81□□□□□ -1.64
C2CD3-214ENST00000540057 CILPO75339 1184 aa4.81□□□□□ -1.64
C2CD3-214ENST00000540057 TSPAN15O95858 294 aa4.81□□□□□ -1.64
C2CD3-214ENST00000540057 CD4P01730 458 aa4.81□□□□□ -1.64
C2CD3-214ENST00000540057 NBPF7P0C2Y1 421 aaPredicted RBP4.81□□□□□ -1.64
C2CD3-214ENST00000540057 AKR1A1P14550 325 aa4.81□□□□□ -1.64
C2CD3-214ENST00000540057 ATP2A2P16615 1042 aaKnown RBP4.81□□□□□ -1.64
C2CD3-214ENST00000540057 VCAM1P19320 739 aa4.81□□□□□ -1.64
C2CD3-214ENST00000540057 ERCC3P19447 782 aa4.81□□□□□ -1.64
C2CD3-214ENST00000540057 PHKA1P46020 1223 aa4.81□□□□□ -1.64
C2CD3-214ENST00000540057 CCL23P55773 120 aa4.81□□□□□ -1.64
C2CD3-214ENST00000540057 TAP1Q03518 808 aa4.81□□□□□ -1.64
C2CD3-214ENST00000540057 TCF15Q12870 199 aa4.81□□□□□ -1.64
C2CD3-214ENST00000540057 BNC2Q6ZN30 1099 aaPredicted RBP4.81□□□□□ -1.64
C2CD3-214ENST00000540057 ZGPATQ8N5A5 531 aaKnown RBP4.81□□□□□ -1.64
C2CD3-214ENST00000540057 ANKRD44Q8N8A2 993 aa4.81□□□□□ -1.64
C2CD3-214ENST00000540057 GLT1D1Q96MS3 346 aa4.81□□□□□ -1.64
C2CD3-214ENST00000540057 SLC38A3Q99624 504 aa4.81□□□□□ -1.64
C2CD3-214ENST00000540057 UBE2ZQ9H832 354 aaPredicted RBP4.81□□□□□ -1.64
C2CD3-214ENST00000540057 SP110Q9HB58 689 aa4.81□□□□□ -1.64
C2CD3-214ENST00000540057 GINM1Q9NU53 330 aa4.81□□□□□ -1.64
C2CD3-214ENST00000540057 FAM86C1Q9NVL1 165 aa4.81□□□□□ -1.64
C2CD3-214ENST00000540057 GNL3LQ9NVN8 582 aaKnown RBP4.81□□□□□ -1.64
C2CD3-214ENST00000540057 SLC5A4Q9NY91 659 aa4.81□□□□□ -1.64
C2CD3-214ENST00000540057 SLAMF8Q9P0V8 285 aa4.81□□□□□ -1.64
C2CD3-214ENST00000540057 ABCF2Q9UG63 623 aa4.81□□□□□ -1.64
C2CD3-214ENST00000540057 NRBP1Q9UHY1 535 aa4.81□□□□□ -1.64
C2CD3-214ENST00000540057 PLXNA3P51805 1871 aa4.81□□□□□ -1.64
C2CD3-214ENST00000540057 TECTAO75443 2155 aa4.8□□□□□ -1.64
C2CD3-214ENST00000540057 A0A0U1RQG5 324 aaPredicted RBP4.8□□□□□ -1.64
C2CD3-214ENST00000540057 EYA2O00167 538 aa4.8□□□□□ -1.64
C2CD3-214ENST00000540057 TLR3O15455 904 aaKnown RBP4.8□□□□□ -1.64
C2CD3-214ENST00000540057 ALDH1L1O75891 902 aa4.8□□□□□ -1.64
C2CD3-214ENST00000540057 MAP4K4O95819 1239 aaPredicted RBP4.8□□□□□ -1.64
C2CD3-214ENST00000540057 ASGR1P07306 291 aa4.8□□□□□ -1.64
C2CD3-214ENST00000540057 SRFP11831 508 aa4.8□□□□□ -1.64
C2CD3-214ENST00000540057 KCNA5P22460 613 aa4.8□□□□□ -1.64
C2CD3-214ENST00000540057 CST5P28325 142 aaPredicted RBP4.8□□□□□ -1.64
C2CD3-214ENST00000540057 ETV3P41162 512 aa4.8□□□□□ -1.64
C2CD3-214ENST00000540057 ERVFC1P60507 584 aa4.8□□□□□ -1.64
C2CD3-214ENST00000540057 MECOMQ03112 1051 aa4.8□□□□□ -1.64
C2CD3-214ENST00000540057 PDE4BQ07343 736 aa4.8□□□□□ -1.64
C2CD3-214ENST00000540057 RASGRF1Q13972 1273 aa4.8□□□□□ -1.64
C2CD3-214ENST00000540057 WDR43Q15061 677 aaKnown RBP eCLIP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 214.8 ms