RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 METTL14Q9HCE5 456 aaKnown RBP15.29■□□□□ 0.04
UBE3B-210ENST00000539599 ZNF277Q9NRM2 450 aaPredicted RBP15.29■□□□□ 0.04
UBE3B-210ENST00000539599 SLC16A3O15427 465 aaKnown RBP15.28■□□□□ 0.04
UBE3B-210ENST00000539599 INPP5BP32019 993 aa15.28■□□□□ 0.04
UBE3B-210ENST00000539599 LIG3P49916 1009 aa15.28■□□□□ 0.04
UBE3B-210ENST00000539599 PPP3CAQ08209 521 aa15.28■□□□□ 0.04
UBE3B-210ENST00000539599 ALS2CLQ60I27 953 aa15.28■□□□□ 0.04
UBE3B-210ENST00000539599 PLEKHO2Q8TD55 490 aa15.28■□□□□ 0.04
UBE3B-210ENST00000539599 UBLCP1Q8WVY7 318 aaPredicted RBP15.28■□□□□ 0.04
UBE3B-210ENST00000539599 STXBP5LQ9Y2K9 1186 aa15.28■□□□□ 0.04
UBE3B-210ENST00000539599 MYL7Q01449 175 aa15.28■□□□□ 0.04
UBE3B-210ENST00000539599 ARHGAP27Q6ZUM4 889 aa15.28■□□□□ 0.04
UBE3B-210ENST00000539599 PACS2Q86VP3 889 aa15.28■□□□□ 0.04
UBE3B-210ENST00000539599 SLC30A5Q8TAD4 765 aa15.28■□□□□ 0.04
UBE3B-210ENST00000539599 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.28■□□□□ 0.041e-6■■■■■ 33.9
UBE3B-210ENST00000539599 FBXL5Q9UKA1 691 aa15.28■□□□□ 0.04
UBE3B-210ENST00000539599 TMX2Q9Y320 296 aa15.28■□□□□ 0.04
UBE3B-210ENST00000539599 EMSYQ7Z589 1322 aa15.28■□□□□ 0.04
UBE3B-210ENST00000539599 ARHGEF35A5YM69 484 aa15.27■□□□□ 0.04
UBE3B-210ENST00000539599 PIK3CDO00329 1044 aa15.27■□□□□ 0.04
UBE3B-210ENST00000539599 PPP2R5CQ13362 524 aa15.27■□□□□ 0.04
UBE3B-210ENST00000539599 ALG3Q92685 438 aa15.27■□□□□ 0.04
UBE3B-210ENST00000539599 ARHGEF10LQ9HCE6 1279 aa15.27■□□□□ 0.04
UBE3B-210ENST00000539599 UBE2TQ9NPD8 197 aaPredicted RBP15.27■□□□□ 0.04
UBE3B-210ENST00000539599 RNF14Q9UBS8 474 aa15.27■□□□□ 0.04
UBE3B-210ENST00000539599 TELO2Q9Y4R8 837 aa15.27■□□□□ 0.04
UBE3B-210ENST00000539599 FRMPD4Q14CM0 1322 aa15.27■□□□□ 0.04
UBE3B-210ENST00000539599 MYH11P35749 1972 aa15.27■□□□□ 0.03
UBE3B-210ENST00000539599 SPDYE2BA6NHP3 402 aa15.27■□□□□ 0.03
UBE3B-210ENST00000539599 SPDYE6P0CI01 402 aa15.27■□□□□ 0.03
UBE3B-210ENST00000539599 TMOD1P28289 359 aa15.27■□□□□ 0.03
UBE3B-210ENST00000539599 UGCGQ16739 394 aa15.27■□□□□ 0.03
UBE3B-210ENST00000539599 HS2ST1Q7LGA3 356 aa15.27■□□□□ 0.03
UBE3B-210ENST00000539599 KRT35Q92764 455 aa15.27■□□□□ 0.03
UBE3B-210ENST00000539599 POP1Q99575 1024 aaKnown RBP15.27■□□□□ 0.03
UBE3B-210ENST00000539599 ZNF70Q9UC06 446 aaPredicted RBP15.27■□□□□ 0.03
UBE3B-210ENST00000539599 USP20Q9Y2K6 914 aa15.27■□□□□ 0.03
UBE3B-210ENST00000539599 FRMD4BQ9Y2L6 1034 aa15.27■□□□□ 0.03
UBE3B-210ENST00000539599 ATRNL1Q5VV63 1379 aa15.27■□□□□ 0.03
UBE3B-210ENST00000539599 NR1D1P20393 614 aa15.26■□□□□ 0.03
UBE3B-210ENST00000539599 ITGB3BPQ13352 177 aaPredicted RBP15.26■□□□□ 0.03
UBE3B-210ENST00000539599 PLA2G4FQ68DD2 849 aa15.26■□□□□ 0.03
UBE3B-210ENST00000539599 PADI6Q6TGC4 694 aa15.26■□□□□ 0.03
UBE3B-210ENST00000539599 PHLDB2Q86SQ0 1253 aa15.26■□□□□ 0.03
UBE3B-210ENST00000539599 UHMK1Q8TAS1 419 aaKnown RBP15.26■□□□□ 0.03
UBE3B-210ENST00000539599 ISCUQ9H1K1 167 aa15.26■□□□□ 0.03
UBE3B-210ENST00000539599 TUFT1Q9NNX1 390 aa15.26■□□□□ 0.03
UBE3B-210ENST00000539599 BZW2Q9Y6E2 419 aaKnown RBP15.26■□□□□ 0.03
UBE3B-210ENST00000539599 CNTNAP1P78357 1384 aa15.26■□□□□ 0.03
UBE3B-210ENST00000539599 RBBP6Q7Z6E9 1792 aaKnown RBP15.26■□□□□ 0.03
UBE3B-210ENST00000539599 VIL1P09327 827 aaKnown RBP15.26■□□□□ 0.03
UBE3B-210ENST00000539599 FERP16591 822 aa15.26■□□□□ 0.03
UBE3B-210ENST00000539599 GAP43P17677 238 aa15.26■□□□□ 0.03
UBE3B-210ENST00000539599 BFSP1Q12934 665 aa15.26■□□□□ 0.03
UBE3B-210ENST00000539599 VPS36Q86VN1 386 aa15.26■□□□□ 0.03
UBE3B-210ENST00000539599 ACTRT1Q8TDG2 376 aa15.26■□□□□ 0.03
UBE3B-210ENST00000539599 STK33Q9BYT3 514 aa15.26■□□□□ 0.03
UBE3B-210ENST00000539599 KCNH7Q9NS40 1196 aa15.26■□□□□ 0.03
UBE3B-210ENST00000539599 APEX2Q9UBZ4 518 aa15.26■□□□□ 0.03
UBE3B-210ENST00000539599 ZNF646O15015 1829 aaPredicted RBP15.26■□□□□ 0.03
UBE3B-210ENST00000539599 NDUFAB1O14561 156 aa15.25■□□□□ 0.03
UBE3B-210ENST00000539599 DDX3YO15523 660 aaKnown RBP15.25■□□□□ 0.03
UBE3B-210ENST00000539599 ENTPD3O75355 529 aa15.25■□□□□ 0.03
UBE3B-210ENST00000539599 EIF2AK2P19525 551 aaKnown RBP15.25■□□□□ 0.03
UBE3B-210ENST00000539599 CTNNA1P35221 906 aaKnown RBP15.25■□□□□ 0.03
UBE3B-210ENST00000539599 NPEPPSP55786 919 aa15.25■□□□□ 0.03
UBE3B-210ENST00000539599 CORO7P57737 925 aa15.25■□□□□ 0.03
UBE3B-210ENST00000539599 SLFN11Q7Z7L1 901 aa15.25■□□□□ 0.03
UBE3B-210ENST00000539599 C7orf43Q8WVR3 580 aa15.25■□□□□ 0.03
UBE3B-210ENST00000539599 SAAL1Q96ER3 474 aa15.25■□□□□ 0.03
UBE3B-210ENST00000539599 HES6Q96HZ4 224 aa15.25■□□□□ 0.03
UBE3B-210ENST00000539599 RANBP17Q9H2T7 1088 aaKnown RBP15.25■□□□□ 0.03
UBE3B-210ENST00000539599 PPANQ9NQ55 473 aaKnown RBP15.25■□□□□ 0.03
UBE3B-210ENST00000539599 FZD1Q9UP38 647 aa15.25■□□□□ 0.03
UBE3B-210ENST00000539599 FAM169AQ9Y6X4 670 aa15.25■□□□□ 0.03
UBE3B-210ENST00000539599 BTNL10A8MVZ5 291 aa15.25■□□□□ 0.03
UBE3B-210ENST00000539599 EIF3DO15371 548 aaKnown RBP eCLIP15.25■□□□□ 0.03
UBE3B-210ENST00000539599 TNFAIP3P21580 790 aa15.25■□□□□ 0.03
UBE3B-210ENST00000539599 HDLBPQ00341 1268 aaKnown RBP15.25■□□□□ 0.03
UBE3B-210ENST00000539599 LMO3Q8TAP4 145 aa15.25■□□□□ 0.03
UBE3B-210ENST00000539599 PBKQ96KB5 322 aa15.25■□□□□ 0.03
UBE3B-210ENST00000539599 NACC1Q96RE7 527 aa15.25■□□□□ 0.03
UBE3B-210ENST00000539599 SYT11Q9BT88 431 aa15.25■□□□□ 0.03
UBE3B-210ENST00000539599 TEKT3Q9BXF9 490 aa15.25■□□□□ 0.03
UBE3B-210ENST00000539599 TOPORSQ9NS56 1045 aaPredicted RBP15.25■□□□□ 0.03
UBE3B-210ENST00000539599 AMFRQ9UKV5 643 aa15.25■□□□□ 0.03
UBE3B-210ENST00000539599 CCPG1Q9ULG6 757 aa15.25■□□□□ 0.03
UBE3B-210ENST00000539599 ZHX2Q9Y6X8 837 aa15.25■□□□□ 0.03
UBE3B-210ENST00000539599 COL4A5P29400 1685 aa15.25■□□□□ 0.03
UBE3B-210ENST00000539599 TCRBV7S2A1N4TA0A589 114 aa15.24■□□□□ 0.03
UBE3B-210ENST00000539599 SMIM23A6NLE4 172 aa15.24■□□□□ 0.03
UBE3B-210ENST00000539599 MYO1FO00160 1098 aa15.24■□□□□ 0.03
UBE3B-210ENST00000539599 SLC16A4O15374 487 aa15.24■□□□□ 0.03
UBE3B-210ENST00000539599 LSP1P33241 339 aa15.24■□□□□ 0.03
UBE3B-210ENST00000539599 ZNF844Q08AG5 666 aa15.24■□□□□ 0.03
UBE3B-210ENST00000539599 NBPF9Q3BBW0 867 aa15.24■□□□□ 0.03
UBE3B-210ENST00000539599 NSMFQ6X4W1 530 aa15.24■□□□□ 0.03
UBE3B-210ENST00000539599 MIER3Q7Z3K6 550 aa15.24■□□□□ 0.03
UBE3B-210ENST00000539599 ZDHHC14Q8IZN3 488 aa15.24■□□□□ 0.03
UBE3B-210ENST00000539599 CTNNBL1Q8WYA6 563 aaPredicted RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms