RNA–Protein interactions for RNA: ENST00000539413.1

CIT-210, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-210ENST00000539413 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.46■□□□□ 0.39
CIT-210ENST00000539413 RNF216Q9NWF9 866 aaPredicted RBP17.46■□□□□ 0.39
CIT-210ENST00000539413 DGAT1O75907 488 aa17.45■□□□□ 0.38
CIT-210ENST00000539413 XRCC6P12956 609 aaKnown RBP eCLIP17.45■□□□□ 0.38
CIT-210ENST00000539413 RPA1P27694 616 aa17.45■□□□□ 0.38
CIT-210ENST00000539413 SKIV2LQ15477 1246 aaKnown RBP17.45■□□□□ 0.38
CIT-210ENST00000539413 RILPL1Q5EBL4 403 aa17.45■□□□□ 0.38
CIT-210ENST00000539413 ECHDC2Q86YB7 292 aa17.45■□□□□ 0.38
CIT-210ENST00000539413 MINDY3Q9H8M7 445 aa17.45■□□□□ 0.38
CIT-210ENST00000539413 LRWD1Q9UFC0 647 aa17.45■□□□□ 0.38
CIT-210ENST00000539413 RWDD3Q9Y3V2 267 aa17.45■□□□□ 0.38
CIT-210ENST00000539413 REV3LO60673 3130 aa17.45■□□□□ 0.38
CIT-210ENST00000539413 UNC80Q8N2C7 3258 aa17.45■□□□□ 0.38
CIT-210ENST00000539413 PRUNE2Q8WUY3 3088 aa17.44■□□□□ 0.38
CIT-210ENST00000539413 TBKBP1A7MCY6 615 aa17.44■□□□□ 0.38
CIT-210ENST00000539413 USO1O60763 962 aaKnown RBP17.44■□□□□ 0.38
CIT-210ENST00000539413 RB1P06400 928 aa17.44■□□□□ 0.38
CIT-210ENST00000539413 IL17AQ16552 155 aa17.44■□□□□ 0.38
CIT-210ENST00000539413 CATSPER4Q7RTX7 472 aa17.44■□□□□ 0.38
CIT-210ENST00000539413 RNF149Q8NC42 400 aa17.44■□□□□ 0.38
CIT-210ENST00000539413 RNF169Q8NCN4 708 aa17.44■□□□□ 0.38
CIT-210ENST00000539413 MRPL38Q96DV4 380 aaKnown RBP17.44■□□□□ 0.38
CIT-210ENST00000539413 NACC1Q96RE7 527 aa17.44■□□□□ 0.38
CIT-210ENST00000539413 CHST12Q9NRB3 414 aa17.44■□□□□ 0.38
CIT-210ENST00000539413 RNF19AQ9NV58 838 aa17.44■□□□□ 0.38
CIT-210ENST00000539413 THEGQ9P2T0 379 aa17.44■□□□□ 0.38
CIT-210ENST00000539413 HCSTQ9UBK5 93 aa17.44■□□□□ 0.38
CIT-210ENST00000539413 DBR1Q9UK59 544 aaKnown RBP17.44■□□□□ 0.38
CIT-210ENST00000539413 PIN4Q9Y237 131 aaKnown RBP17.44■□□□□ 0.38
CIT-210ENST00000539413 KIAA1671Q9BY89 1806 aa17.43■□□□□ 0.38
CIT-210ENST00000539413 A0A0U1RQF3 1178 aa17.43■□□□□ 0.38
CIT-210ENST00000539413 LAD1O00515 517 aa17.43■□□□□ 0.38
CIT-210ENST00000539413 ASAP2O43150 1006 aa17.43■□□□□ 0.38
CIT-210ENST00000539413 ARL2P36404 184 aa17.43■□□□□ 0.38
CIT-210ENST00000539413 CCT6AP40227 531 aaKnown RBP17.43■□□□□ 0.38
CIT-210ENST00000539413 ECM1Q16610 540 aa17.43■□□□□ 0.38
CIT-210ENST00000539413 HAUS3Q68CZ6 603 aa17.43■□□□□ 0.38
CIT-210ENST00000539413 SRGAP1Q7Z6B7 1085 aa17.43■□□□□ 0.38
CIT-210ENST00000539413 IGSF22Q8N9C0 903 aa17.43■□□□□ 0.38
CIT-210ENST00000539413 ASAP3Q8TDY4 903 aa17.43■□□□□ 0.38
CIT-210ENST00000539413 C11orf84Q9BUA3 381 aaPredicted RBP17.43■□□□□ 0.38
CIT-210ENST00000539413 DACT1Q9NYF0 836 aa17.43■□□□□ 0.38
CIT-210ENST00000539413 PP2D1A8MPX8 630 aa17.42■□□□□ 0.38
CIT-210ENST00000539413 GRM6O15303 877 aa17.42■□□□□ 0.38
CIT-210ENST00000539413 ATF7P17544 494 aaPredicted RBP17.42■□□□□ 0.38
CIT-210ENST00000539413 GLRA2P23416 452 aa17.42■□□□□ 0.38
CIT-210ENST00000539413 PRPHP41219 470 aa17.42■□□□□ 0.38
CIT-210ENST00000539413 PHKA2P46019 1235 aa17.42■□□□□ 0.38
CIT-210ENST00000539413 CAPSQ13938 189 aa17.42■□□□□ 0.38
CIT-210ENST00000539413 PDIA5Q14554 519 aa17.42■□□□□ 0.38
CIT-210ENST00000539413 MXD4Q14582 209 aaPredicted RBP17.42■□□□□ 0.38
CIT-210ENST00000539413 PTPROQ16827 1216 aa17.42■□□□□ 0.38
CIT-210ENST00000539413 TWF2Q6IBS0 349 aaKnown RBP17.42■□□□□ 0.38
CIT-210ENST00000539413 DTHD1Q6ZMT9 781 aa17.42■□□□□ 0.38
CIT-210ENST00000539413 MAEAQ7L5Y9 396 aa17.42■□□□□ 0.38
CIT-210ENST00000539413 ZNF598Q86UK7 904 aaKnown RBP17.42■□□□□ 0.38
CIT-210ENST00000539413 SNX29Q8TEQ0 813 aa17.42■□□□□ 0.38
CIT-210ENST00000539413 CASD1Q96PB1 797 aa17.42■□□□□ 0.38
CIT-210ENST00000539413 PLVAPQ9BX97 442 aa17.42■□□□□ 0.38
CIT-210ENST00000539413 TMEM117Q9H0C3 514 aa17.42■□□□□ 0.38
CIT-210ENST00000539413 POLR3FQ9H1D9 316 aaPredicted RBP17.42■□□□□ 0.38
CIT-210ENST00000539413 GPRC5CQ9NQ84 441 aa17.42■□□□□ 0.38
CIT-210ENST00000539413 AGPAT5Q9NUQ2 364 aa17.42■□□□□ 0.38
CIT-210ENST00000539413 TYW1Q9NV66 732 aaKnown RBP17.42■□□□□ 0.38
CIT-210ENST00000539413 FNDC1Q4ZHG4 1894 aaPredicted RBP17.41■□□□□ 0.38
CIT-210ENST00000539413 VPS37CA5D8V6 355 aaPredicted RBP17.41■□□□□ 0.38
CIT-210ENST00000539413 HOXA2O43364 376 aa17.41■□□□□ 0.38
CIT-210ENST00000539413 EOMESO95936 686 aa17.41■□□□□ 0.38
CIT-210ENST00000539413 MUTP22033 750 aa17.41■□□□□ 0.38
CIT-210ENST00000539413 PTENP60484 403 aa17.41■□□□□ 0.38
CIT-210ENST00000539413 ATP2C1P98194 919 aaPredicted RBP17.41■□□□□ 0.38
CIT-210ENST00000539413 TFDP1Q14186 410 aa17.41■□□□□ 0.38
CIT-210ENST00000539413 CLLU1OSQ5K130 101 aa17.41■□□□□ 0.38
CIT-210ENST00000539413 SPOUT1Q5T280 376 aaKnown RBP17.41■□□□□ 0.38
CIT-210ENST00000539413 KLHL23Q8NBE8 558 aa17.41■□□□□ 0.38
CIT-210ENST00000539413 ATXN2LQ8WWM7 1075 aaKnown RBP17.41■□□□□ 0.38
CIT-210ENST00000539413 P2RX5Q93086 422 aa17.41■□□□□ 0.38
CIT-210ENST00000539413 TRAIPQ9BWF2 469 aa17.41■□□□□ 0.38
CIT-210ENST00000539413 RAB34Q9BZG1 259 aa17.41■□□□□ 0.38
CIT-210ENST00000539413 CWH43Q9H720 699 aa17.41■□□□□ 0.38
CIT-210ENST00000539413 ALG13Q9NP73 1137 aaKnown RBP17.41■□□□□ 0.38
CIT-210ENST00000539413 FAM105AQ9NUU6 356 aa17.41■□□□□ 0.38
CIT-210ENST00000539413 ARHGEF35A5YM69 484 aa17.4■□□□□ 0.38
CIT-210ENST00000539413 K7ELQ4 463 aaPredicted RBP17.4■□□□□ 0.38
CIT-210ENST00000539413 CSPG5O95196 566 aa17.4■□□□□ 0.38
CIT-210ENST00000539413 CDC25AP30304 524 aa17.4■□□□□ 0.38
CIT-210ENST00000539413 TFF2Q03403 129 aa17.4■□□□□ 0.38
CIT-210ENST00000539413 PADI6Q6TGC4 694 aa17.4■□□□□ 0.38
CIT-210ENST00000539413 LRRC55Q6ZSA7 311 aa17.4■□□□□ 0.38
CIT-210ENST00000539413 ABI1Q8IZP0 508 aa17.4■□□□□ 0.38
CIT-210ENST00000539413 MCPH1Q8NEM0 835 aa17.4■□□□□ 0.38
CIT-210ENST00000539413 HELQQ8TDG4 1101 aa17.4■□□□□ 0.38
CIT-210ENST00000539413 LPPQ93052 612 aa17.4■□□□□ 0.38
CIT-210ENST00000539413 COL25A1Q9BXS0 654 aaPredicted RBP17.4■□□□□ 0.38
CIT-210ENST00000539413 LMAN2LQ9H0V9 348 aa17.4■□□□□ 0.38
CIT-210ENST00000539413 FOXD4L1Q9NU39 408 aa17.4■□□□□ 0.38
CIT-210ENST00000539413 DDX19AQ9NUU7 478 aaKnown RBP17.4■□□□□ 0.38
CIT-210ENST00000539413 PLAGL2Q9UPG8 496 aa17.4■□□□□ 0.38
CIT-210ENST00000539413 KIAA1024Q9UPX6 916 aa17.4■□□□□ 0.38
CIT-210ENST00000539413 INO80B-WBP1J3KQ70 363 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms