RNA–Protein interactions for RNA: ENST00000538446.5

CDK2AP1-204, Transcript of cyclin dependent kinase 2 associated protein 1, humanhuman

TSL 5 BASIC

Gene CDK2AP1, Length 1,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2AP1-204ENST00000538446 PLS3P13797 630 aa14.09□□□□□ -0.15
CDK2AP1-204ENST00000538446 IDEP14735 1019 aa14.09□□□□□ -0.15
CDK2AP1-204ENST00000538446 ITGB8P26012 769 aa14.09□□□□□ -0.15
CDK2AP1-204ENST00000538446 MCM4P33991 863 aa14.09□□□□□ -0.15
CDK2AP1-204ENST00000538446 RFC2P35250 354 aa14.09□□□□□ -0.15
CDK2AP1-204ENST00000538446 NAMPTP43490 491 aa14.09□□□□□ -0.15
CDK2AP1-204ENST00000538446 ASIC1P78348 528 aa14.09□□□□□ -0.15
CDK2AP1-204ENST00000538446 MLLT1Q03111 559 aaPredicted RBP14.09□□□□□ -0.15
CDK2AP1-204ENST00000538446 MGAT3Q09327 533 aa14.09□□□□□ -0.15
CDK2AP1-204ENST00000538446 CAPSQ13938 189 aa14.09□□□□□ -0.15
CDK2AP1-204ENST00000538446 ODR4Q5SWX8 454 aa14.09□□□□□ -0.15
CDK2AP1-204ENST00000538446 TRAF7Q6Q0C0 670 aa14.09□□□□□ -0.15
CDK2AP1-204ENST00000538446 GRAMD1CQ8IYS0 662 aa14.09□□□□□ -0.15
CDK2AP1-204ENST00000538446 DEPTORQ8TB45 409 aa14.09□□□□□ -0.15
CDK2AP1-204ENST00000538446 SCLYQ96I15 445 aa14.09□□□□□ -0.15
CDK2AP1-204ENST00000538446 OSMRQ99650 979 aa14.09□□□□□ -0.15
CDK2AP1-204ENST00000538446 C7orf25Q9BPX7 421 aa14.09□□□□□ -0.15
CDK2AP1-204ENST00000538446 LBHD1Q9BQE6 289 aaPredicted RBP14.09□□□□□ -0.15
CDK2AP1-204ENST00000538446 FDXACB1Q9BRP7 624 aaPredicted RBP14.09□□□□□ -0.15
CDK2AP1-204ENST00000538446 INO80BQ9C086 356 aaPredicted RBP14.09□□□□□ -0.15
CDK2AP1-204ENST00000538446 PARVGQ9HBI0 331 aa14.09□□□□□ -0.15
CDK2AP1-204ENST00000538446 DACT1Q9NYF0 836 aa14.09□□□□□ -0.15
CDK2AP1-204ENST00000538446 KCNG1Q9UIX4 513 aa14.09□□□□□ -0.15
CDK2AP1-204ENST00000538446 SQORQ9Y6N5 450 aa14.09□□□□□ -0.15
CDK2AP1-204ENST00000538446 MYH9P35579 1960 aaKnown RBP14.09□□□□□ -0.15
CDK2AP1-204ENST00000538446 CCDC169A6NNP5 214 aa14.08□□□□□ -0.16
CDK2AP1-204ENST00000538446 GTPBP6O43824 516 aaPredicted RBP14.08□□□□□ -0.16
CDK2AP1-204ENST00000538446 GHRP10912 638 aa14.08□□□□□ -0.16
CDK2AP1-204ENST00000538446 DARSP14868 501 aaKnown RBP14.08□□□□□ -0.16
CDK2AP1-204ENST00000538446 GAP43P17677 238 aa14.08□□□□□ -0.16
CDK2AP1-204ENST00000538446 EIF4BP23588 611 aaKnown RBP14.08□□□□□ -0.16
CDK2AP1-204ENST00000538446 ZNF131P52739 623 aa14.08□□□□□ -0.16
CDK2AP1-204ENST00000538446 SMTNP53814 917 aa14.08□□□□□ -0.16
CDK2AP1-204ENST00000538446 PEX3P56589 373 aa14.08□□□□□ -0.16
CDK2AP1-204ENST00000538446 FPGSQ05932 587 aa14.08□□□□□ -0.16
CDK2AP1-204ENST00000538446 POU5F1BQ06416 359 aa14.08□□□□□ -0.16
CDK2AP1-204ENST00000538446 FBXO47Q5MNV8 452 aa14.08□□□□□ -0.16
CDK2AP1-204ENST00000538446 CNNM4Q6P4Q7 775 aa14.08□□□□□ -0.16
CDK2AP1-204ENST00000538446 ZBTB8OSQ8IWT0 167 aa14.08□□□□□ -0.16
CDK2AP1-204ENST00000538446 CCDC65Q8IXS2 484 aa14.08□□□□□ -0.16
CDK2AP1-204ENST00000538446 MYCT1Q8N699 235 aa14.08□□□□□ -0.16
CDK2AP1-204ENST00000538446 USP38Q8NB14 1042 aa14.08□□□□□ -0.16
CDK2AP1-204ENST00000538446 BSNDQ8WZ55 320 aa14.08□□□□□ -0.16
CDK2AP1-204ENST00000538446 BADQ92934 168 aa14.08□□□□□ -0.16
CDK2AP1-204ENST00000538446 DNAJC19Q96DA6 116 aa14.08□□□□□ -0.16
CDK2AP1-204ENST00000538446 C2orf40Q9H1Z8 148 aa14.08□□□□□ -0.16
CDK2AP1-204ENST00000538446 BLZF1Q9H2G9 400 aa14.08□□□□□ -0.16
CDK2AP1-204ENST00000538446 CDHR5Q9HBB8 845 aa14.08□□□□□ -0.16
CDK2AP1-204ENST00000538446 MBD3O95983 291 aa14.07□□□□□ -0.16
CDK2AP1-204ENST00000538446 CSF2RAP15509 400 aa14.07□□□□□ -0.16
CDK2AP1-204ENST00000538446 PTMSP20962 102 aa14.07□□□□□ -0.16
CDK2AP1-204ENST00000538446 SFPQP23246 707 aaKnown RBP eCLIP14.07□□□□□ -0.16
CDK2AP1-204ENST00000538446 NPTX2P47972 431 aa14.07□□□□□ -0.16
CDK2AP1-204ENST00000538446 PTENP60484 403 aa14.07□□□□□ -0.16
CDK2AP1-204ENST00000538446 PPIGQ13427 754 aaKnown RBP eCLIP14.07□□□□□ -0.16
CDK2AP1-204ENST00000538446 CUL4BQ13620 913 aa14.07□□□□□ -0.16
CDK2AP1-204ENST00000538446 LPIN1Q14693 890 aa14.07□□□□□ -0.16
CDK2AP1-204ENST00000538446 MBTPS1Q14703 1052 aa14.07□□□□□ -0.16
CDK2AP1-204ENST00000538446 POSTNQ15063 836 aa14.07□□□□□ -0.16
CDK2AP1-204ENST00000538446 TSHZ1Q6ZSZ6 1077 aa14.07□□□□□ -0.16
CDK2AP1-204ENST00000538446 SRGAP1Q7Z6B7 1085 aa14.07□□□□□ -0.16
CDK2AP1-204ENST00000538446 TMEM40Q8WWA1 233 aa14.07□□□□□ -0.16
CDK2AP1-204ENST00000538446 SPIRE2Q8WWL2 714 aa14.07□□□□□ -0.16
CDK2AP1-204ENST00000538446 NFKBIZQ9BYH8 718 aa14.07□□□□□ -0.16
CDK2AP1-204ENST00000538446 IFT122Q9HBG6 1241 aa14.07□□□□□ -0.16
CDK2AP1-204ENST00000538446 KMT5AQ9NQR1 393 aa14.07□□□□□ -0.16
CDK2AP1-204ENST00000538446 PANK4Q9NVE7 773 aa14.07□□□□□ -0.16
CDK2AP1-204ENST00000538446 SEL1LQ9UBV2 794 aa14.07□□□□□ -0.16
CDK2AP1-204ENST00000538446 PVALEFA0A1B0GWK0 134 aa14.06□□□□□ -0.16
CDK2AP1-204ENST00000538446 FRMD3A2A2Y4 597 aa14.06□□□□□ -0.16
CDK2AP1-204ENST00000538446 H0YCG3 227 aa14.06□□□□□ -0.16
CDK2AP1-204ENST00000538446 INO80B-WBP1J3KQ70 363 aa14.06□□□□□ -0.16
CDK2AP1-204ENST00000538446 TRAK2O60296 914 aa14.06□□□□□ -0.16
CDK2AP1-204ENST00000538446 NBNO60934 754 aa14.06□□□□□ -0.16
CDK2AP1-204ENST00000538446 RPS6KA5O75582 802 aa14.06□□□□□ -0.16
CDK2AP1-204ENST00000538446 PFKMP08237 780 aa14.06□□□□□ -0.16
CDK2AP1-204ENST00000538446 CASP1P29466 404 aa14.06□□□□□ -0.16
CDK2AP1-204ENST00000538446 EFNA5P52803 228 aa14.06□□□□□ -0.16
CDK2AP1-204ENST00000538446 PAK2Q13177 524 aa14.06□□□□□ -0.16
CDK2AP1-204ENST00000538446 HERC4Q5GLZ8 1057 aaPredicted RBP14.06□□□□□ -0.16
CDK2AP1-204ENST00000538446 CDCA2Q69YH5 1023 aaPredicted RBP14.06□□□□□ -0.16
CDK2AP1-204ENST00000538446 UNC13DQ70J99 1090 aa14.06□□□□□ -0.16
CDK2AP1-204ENST00000538446 DEFB128Q7Z7B8 93 aa14.06□□□□□ -0.16
CDK2AP1-204ENST00000538446 SFR1Q86XK3 245 aa14.06□□□□□ -0.16
CDK2AP1-204ENST00000538446 IFNLR1Q8IU57 520 aaPredicted RBP14.06□□□□□ -0.16
CDK2AP1-204ENST00000538446 FAM178BQ8IXR5 827 aa14.06□□□□□ -0.16
CDK2AP1-204ENST00000538446 ELOA2Q8IYF1 753 aaPredicted RBP14.06□□□□□ -0.16
CDK2AP1-204ENST00000538446 RPUSD2Q8IZ73 545 aaKnown RBP14.06□□□□□ -0.16
CDK2AP1-204ENST00000538446 SLC17A8Q8NDX2 589 aa14.06□□□□□ -0.16
CDK2AP1-204ENST00000538446 CCDC47Q96A33 483 aaKnown RBP14.06□□□□□ -0.16
CDK2AP1-204ENST00000538446 NTPCRQ9BSD7 190 aaKnown RBP14.06□□□□□ -0.16
CDK2AP1-204ENST00000538446 IFIH1Q9BYX4 1025 aaKnown RBP14.06□□□□□ -0.16
CDK2AP1-204ENST00000538446 K7ENM7 598 aa14.05□□□□□ -0.16
CDK2AP1-204ENST00000538446 GPR182O15218 404 aa14.05□□□□□ -0.16
CDK2AP1-204ENST00000538446 SLC16A4O15374 487 aa14.05□□□□□ -0.16
CDK2AP1-204ENST00000538446 CSDE1O75534 798 aaKnown RBP14.05□□□□□ -0.16
CDK2AP1-204ENST00000538446 ERLIN2O94905 339 aa14.05□□□□□ -0.16
CDK2AP1-204ENST00000538446 SMC2O95347 1197 aa14.05□□□□□ -0.16
CDK2AP1-204ENST00000538446 CXCL10P02778 98 aa14.05□□□□□ -0.16
CDK2AP1-204ENST00000538446 PRR29P0C7W0 189 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms