RNA–Protein interactions for RNA: ENST00000537533.1

PTPN6-209, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 3

Gene PTPN6, Length 673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-209ENST00000537533 FERMT3Q86UX7 667 aa13.92□□□□□ -0.18
PTPN6-209ENST00000537533 KSR1Q8IVT5 923 aa13.92□□□□□ -0.18
PTPN6-209ENST00000537533 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.92□□□□□ -0.18
PTPN6-209ENST00000537533 IGSF22Q8N9C0 903 aa13.92□□□□□ -0.18
PTPN6-209ENST00000537533 GDPD5Q8WTR4 605 aa13.92□□□□□ -0.18
PTPN6-209ENST00000537533 PRPF31Q8WWY3 499 aaKnown RBP13.92□□□□□ -0.18
PTPN6-209ENST00000537533 TMEM143Q96AN5 459 aa13.92□□□□□ -0.18
PTPN6-209ENST00000537533 INTS4Q96HW7 963 aaKnown RBP13.92□□□□□ -0.18
PTPN6-209ENST00000537533 NACC1Q96RE7 527 aa13.92□□□□□ -0.18
PTPN6-209ENST00000537533 TRAIPQ9BWF2 469 aa13.92□□□□□ -0.18
PTPN6-209ENST00000537533 ATP6V0A4Q9HBG4 840 aa13.92□□□□□ -0.18
PTPN6-209ENST00000537533 TMEM161AQ9NX61 479 aa13.92□□□□□ -0.18
PTPN6-209ENST00000537533 DBR1Q9UK59 544 aaKnown RBP13.92□□□□□ -0.18
PTPN6-209ENST00000537533 LRFN2Q9ULH4 789 aa13.92□□□□□ -0.18
PTPN6-209ENST00000537533 STK24Q9Y6E0 443 aa13.92□□□□□ -0.18
PTPN6-209ENST00000537533 BRWD1Q9NSI6 2320 aa13.92□□□□□ -0.18
PTPN6-209ENST00000537533 FGFR4P22455 802 aa13.91□□□□□ -0.18
PTPN6-209ENST00000537533 BMPR1AP36894 532 aa13.91□□□□□ -0.18
PTPN6-209ENST00000537533 POU5F1BQ06416 359 aa13.91□□□□□ -0.18
PTPN6-209ENST00000537533 MXD4Q14582 209 aaPredicted RBP13.91□□□□□ -0.18
PTPN6-209ENST00000537533 SRGAP1Q7Z6B7 1085 aa13.91□□□□□ -0.18
PTPN6-209ENST00000537533 PIGOQ8TEQ8 1089 aa13.91□□□□□ -0.18
PTPN6-209ENST00000537533 NLRP4Q96MN2 994 aa13.91□□□□□ -0.18
PTPN6-209ENST00000537533 RAB34Q9BZG1 259 aa13.91□□□□□ -0.18
PTPN6-209ENST00000537533 DACT1Q9NYF0 836 aa13.91□□□□□ -0.18
PTPN6-209ENST00000537533 VCANP13611 3396 aa13.91□□□□□ -0.18
PTPN6-209ENST00000537533 A0A0U1RQF3 1178 aa13.9□□□□□ -0.18
PTPN6-209ENST00000537533 CSDE1O75534 798 aaKnown RBP13.9□□□□□ -0.18
PTPN6-209ENST00000537533 EOMESO95936 686 aa13.9□□□□□ -0.18
PTPN6-209ENST00000537533 PDCP20941 246 aa13.9□□□□□ -0.18
PTPN6-209ENST00000537533 ARL2P36404 184 aa13.9□□□□□ -0.18
PTPN6-209ENST00000537533 ATP2C1P98194 919 aaPredicted RBP13.9□□□□□ -0.18
PTPN6-209ENST00000537533 PCBP1Q15365 356 aaKnown RBP eCLIP13.9□□□□□ -0.18
PTPN6-209ENST00000537533 IL17AQ16552 155 aa13.9□□□□□ -0.18
PTPN6-209ENST00000537533 ZNF598Q86UK7 904 aaKnown RBP13.9□□□□□ -0.18
PTPN6-209ENST00000537533 ECHDC2Q86YB7 292 aa13.9□□□□□ -0.18
PTPN6-209ENST00000537533 IFNLR1Q8IU57 520 aaPredicted RBP13.9□□□□□ -0.18
PTPN6-209ENST00000537533 SNX21Q969T3 373 aa13.9□□□□□ -0.18
PTPN6-209ENST00000537533 PLVAPQ9BX97 442 aa13.9□□□□□ -0.18
PTPN6-209ENST00000537533 BMP2KQ9NSY1 1161 aaPredicted RBP13.9□□□□□ -0.18
PTPN6-209ENST00000537533 LRWD1Q9UFC0 647 aa13.9□□□□□ -0.18
PTPN6-209ENST00000537533 MRPL42Q9Y6G3 142 aaKnown RBP13.9□□□□□ -0.18
PTPN6-209ENST00000537533 XIRP2A4UGR9 3374 aa13.9□□□□□ -0.18
PTPN6-209ENST00000537533 A0A087WWV3 80 aa13.89□□□□□ -0.19
PTPN6-209ENST00000537533 K7ELQ4 463 aaPredicted RBP13.89□□□□□ -0.19
PTPN6-209ENST00000537533 HOXA2O43364 376 aa13.89□□□□□ -0.19
PTPN6-209ENST00000537533 SRGAP2CP0DJJ0 459 aa13.89□□□□□ -0.19
PTPN6-209ENST00000537533 CTNNB1P35222 781 aa13.89□□□□□ -0.19
PTPN6-209ENST00000537533 GATMP50440 423 aa13.89□□□□□ -0.19
PTPN6-209ENST00000537533 PTENP60484 403 aa13.89□□□□□ -0.19
PTPN6-209ENST00000537533 GPM6BQ13491 265 aa13.89□□□□□ -0.19
PTPN6-209ENST00000537533 CCDC85BQ15834 202 aaPredicted RBP13.89□□□□□ -0.19
PTPN6-209ENST00000537533 ECM1Q16610 540 aa13.89□□□□□ -0.19
PTPN6-209ENST00000537533 NAALADL2Q58DX5 795 aa13.89□□□□□ -0.19
PTPN6-209ENST00000537533 FAM102BQ5T8I3 360 aa13.89□□□□□ -0.19
PTPN6-209ENST00000537533 ARL6IP4Q66PJ3 421 aaKnown RBP13.89□□□□□ -0.19
PTPN6-209ENST00000537533 POTEGQ6S5H5 508 aa13.89□□□□□ -0.19
PTPN6-209ENST00000537533 DTHD1Q6ZMT9 781 aa13.89□□□□□ -0.19
PTPN6-209ENST00000537533 BRAPQ7Z569 592 aa13.89□□□□□ -0.19
PTPN6-209ENST00000537533 RNF149Q8NC42 400 aa13.89□□□□□ -0.19
PTPN6-209ENST00000537533 MCPH1Q8NEM0 835 aa13.89□□□□□ -0.19
PTPN6-209ENST00000537533 PPM1EQ8WY54 764 aa13.89□□□□□ -0.19
PTPN6-209ENST00000537533 P2RX5Q93086 422 aa13.89□□□□□ -0.19
PTPN6-209ENST00000537533 MRPL38Q96DV4 380 aaKnown RBP13.89□□□□□ -0.19
PTPN6-209ENST00000537533 CCDC43Q96MW1 224 aaKnown RBP13.89□□□□□ -0.19
PTPN6-209ENST00000537533 C11orf84Q9BUA3 381 aaPredicted RBP13.89□□□□□ -0.19
PTPN6-209ENST00000537533 NFKBIZQ9BYH8 718 aa13.89□□□□□ -0.19
PTPN6-209ENST00000537533 MINDY3Q9H8M7 445 aa13.89□□□□□ -0.19
PTPN6-209ENST00000537533 AGPAT5Q9NUQ2 364 aa13.89□□□□□ -0.19
PTPN6-209ENST00000537533 RNF19AQ9NV58 838 aa13.89□□□□□ -0.19
PTPN6-209ENST00000537533 PLXNA4Q9HCM2 1894 aa13.89□□□□□ -0.19
PTPN6-209ENST00000537533 ZNF623O75123 536 aa13.88□□□□□ -0.19
PTPN6-209ENST00000537533 SKIP12755 728 aa13.88□□□□□ -0.19
PTPN6-209ENST00000537533 GLRA2P23416 452 aa13.88□□□□□ -0.19
PTPN6-209ENST00000537533 CCT6AP40227 531 aaKnown RBP13.88□□□□□ -0.19
PTPN6-209ENST00000537533 PHKA2P46019 1235 aa13.88□□□□□ -0.19
PTPN6-209ENST00000537533 TFDP1Q14186 410 aa13.88□□□□□ -0.19
PTPN6-209ENST00000537533 PTPROQ16827 1216 aa13.88□□□□□ -0.19
PTPN6-209ENST00000537533 PAN2Q504Q3 1202 aaKnown RBP13.88□□□□□ -0.19
PTPN6-209ENST00000537533 CATSPER4Q7RTX7 472 aa13.88□□□□□ -0.19
PTPN6-209ENST00000537533 ASAP3Q8TDY4 903 aa13.88□□□□□ -0.19
PTPN6-209ENST00000537533 TMEM117Q9H0C3 514 aa13.88□□□□□ -0.19
PTPN6-209ENST00000537533 LMAN2LQ9H0V9 348 aa13.88□□□□□ -0.19
PTPN6-209ENST00000537533 PRDM6Q9NQX0 595 aa13.88□□□□□ -0.19
PTPN6-209ENST00000537533 TBKBP1A7MCY6 615 aa13.87□□□□□ -0.19
PTPN6-209ENST00000537533 USO1O60763 962 aaKnown RBP13.87□□□□□ -0.19
PTPN6-209ENST00000537533 FGFR1P11362 822 aa13.87□□□□□ -0.19
PTPN6-209ENST00000537533 ATF7P17544 494 aaPredicted RBP13.87□□□□□ -0.19
PTPN6-209ENST00000537533 CYP11B2P19099 503 aa13.87□□□□□ -0.19
PTPN6-209ENST00000537533 HOXA11P31270 313 aaPredicted RBP13.87□□□□□ -0.19
PTPN6-209ENST00000537533 CAPSQ13938 189 aa13.87□□□□□ -0.19
PTPN6-209ENST00000537533 KRT79Q5XKE5 535 aa13.87□□□□□ -0.19
PTPN6-209ENST00000537533 PADI6Q6TGC4 694 aa13.87□□□□□ -0.19
PTPN6-209ENST00000537533 MICALL1Q8N3F8 863 aa13.87□□□□□ -0.19
PTPN6-209ENST00000537533 SNX29Q8TEQ0 813 aa13.87□□□□□ -0.19
PTPN6-209ENST00000537533 ATXN2LQ8WWM7 1075 aaKnown RBP13.87□□□□□ -0.19
PTPN6-209ENST00000537533 RSPH1Q8WYR4 309 aa13.87□□□□□ -0.19
PTPN6-209ENST00000537533 CASD1Q96PB1 797 aa13.87□□□□□ -0.19
PTPN6-209ENST00000537533 MMTAG2Q9BU76 263 aaKnown RBP13.87□□□□□ -0.19
PTPN6-209ENST00000537533 POLR3FQ9H1D9 316 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms