RNA–Protein interactions for RNA: ENST00000534208.5

NDUFS3-212, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 4 BASIC

Gene NDUFS3, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-212ENST00000534208 PPM1AP35813 382 aa22.18■■□□□ 1.14
NDUFS3-212ENST00000534208 ERVFC1P60507 584 aa22.18■■□□□ 1.14
NDUFS3-212ENST00000534208 CLLU1OSQ5K130 101 aa22.18■■□□□ 1.14
NDUFS3-212ENST00000534208 RBM23Q86U06 439 aaKnown RBP22.18■■□□□ 1.14
NDUFS3-212ENST00000534208 MRPS27Q92552 414 aaKnown RBP22.18■■□□□ 1.14
NDUFS3-212ENST00000534208 JPH2Q9BR39 696 aaPredicted RBP22.18■■□□□ 1.14
NDUFS3-212ENST00000534208 SH2D3AQ9BRG2 576 aa22.18■■□□□ 1.14
NDUFS3-212ENST00000534208 TRAIPQ9BWF2 469 aa22.18■■□□□ 1.14
NDUFS3-212ENST00000534208 HCN4Q9Y3Q4 1203 aa22.18■■□□□ 1.14
NDUFS3-212ENST00000534208 PRR33A8MZF0 331 aa22.17■■□□□ 1.14
NDUFS3-212ENST00000534208 DKC1O60832 514 aaKnown RBP eCLIP22.17■■□□□ 1.14
NDUFS3-212ENST00000534208 ATF7P17544 494 aaPredicted RBP22.17■■□□□ 1.14
NDUFS3-212ENST00000534208 FGFR4P22455 802 aa22.17■■□□□ 1.14
NDUFS3-212ENST00000534208 SFPQP23246 707 aaKnown RBP eCLIP22.17■■□□□ 1.14
NDUFS3-212ENST00000534208 PLA2G5P39877 138 aa22.17■■□□□ 1.14
NDUFS3-212ENST00000534208 QARSP47897 775 aaKnown RBP22.17■■□□□ 1.14
NDUFS3-212ENST00000534208 KCNT2Q6UVM3 1135 aa22.17■■□□□ 1.14
NDUFS3-212ENST00000534208 OXER1Q8TDS5 423 aa22.17■■□□□ 1.14
NDUFS3-212ENST00000534208 RSPH1Q8WYR4 309 aa22.17■■□□□ 1.14
NDUFS3-212ENST00000534208 WASF1Q92558 559 aa22.17■■□□□ 1.14
NDUFS3-212ENST00000534208 HAS1Q92839 578 aa22.17■■□□□ 1.14
NDUFS3-212ENST00000534208 ZNF558Q96NG5 402 aa22.17■■□□□ 1.14
NDUFS3-212ENST00000534208 INO80BQ9C086 356 aaPredicted RBP22.17■■□□□ 1.14
NDUFS3-212ENST00000534208 GJB4Q9NTQ9 266 aa22.17■■□□□ 1.14
NDUFS3-212ENST00000534208 SUCLA2Q9P2R7 463 aaPredicted RBP22.17■■□□□ 1.14
NDUFS3-212ENST00000534208 PUF60Q9UHX1 559 aaKnown RBP22.17■■□□□ 1.14
NDUFS3-212ENST00000534208 PPME1Q9Y570 386 aa22.17■■□□□ 1.14
NDUFS3-212ENST00000534208 A0A087WZ62 844 aa22.16■■□□□ 1.14
NDUFS3-212ENST00000534208 CCNT1O60563 726 aaKnown RBP22.16■■□□□ 1.14
NDUFS3-212ENST00000534208 CSDE1O75534 798 aaKnown RBP22.16■■□□□ 1.14
NDUFS3-212ENST00000534208 P4HBP07237 508 aaKnown RBP22.16■■□□□ 1.14
NDUFS3-212ENST00000534208 AK2P54819 239 aa22.16■■□□□ 1.14
NDUFS3-212ENST00000534208 DUSP6Q16828 381 aa22.16■■□□□ 1.14
NDUFS3-212ENST00000534208 PIK3AP1Q6ZUJ8 805 aa22.16■■□□□ 1.14
NDUFS3-212ENST00000534208 RNF169Q8NCN4 708 aa22.16■■□□□ 1.14
NDUFS3-212ENST00000534208 FDXACB1Q9BRP7 624 aaPredicted RBP22.16■■□□□ 1.14
NDUFS3-212ENST00000534208 CYP26B1Q9NR63 512 aa22.16■■□□□ 1.14
NDUFS3-212ENST00000534208 ORC3Q9UBD5 711 aaPredicted RBP22.16■■□□□ 1.14
NDUFS3-212ENST00000534208 BARX2Q9UMQ3 279 aaPredicted RBP22.16■■□□□ 1.14
NDUFS3-212ENST00000534208 TRIOO75962 3097 aa22.16■■□□□ 1.14
NDUFS3-212ENST00000534208 PLA2G4FQ68DD2 849 aa22.15■■□□□ 1.14
NDUFS3-212ENST00000534208 RHPN2Q8IUC4 686 aa22.15■■□□□ 1.14
NDUFS3-212ENST00000534208 EXOC8Q8IYI6 725 aa22.15■■□□□ 1.14
NDUFS3-212ENST00000534208 MRPL9Q9BYD2 267 aaKnown RBP22.15■■□□□ 1.14
NDUFS3-212ENST00000534208 NGRNQ9NPE2 291 aaKnown RBP22.15■■□□□ 1.14
NDUFS3-212ENST00000534208 SPG21Q9NZD8 308 aa22.15■■□□□ 1.14
NDUFS3-212ENST00000534208 PER2O15055 1255 aa22.14■■□□□ 1.13
NDUFS3-212ENST00000534208 FDPSP14324 419 aaKnown RBP22.14■■□□□ 1.13
NDUFS3-212ENST00000534208 PHKA2P46019 1235 aa22.14■■□□□ 1.13
NDUFS3-212ENST00000534208 KRT17Q04695 432 aa22.14■■□□□ 1.13
NDUFS3-212ENST00000534208 EPHA7Q15375 998 aa22.14■■□□□ 1.13
NDUFS3-212ENST00000534208 EARS2Q5JPH6 523 aaKnown RBP22.14■■□□□ 1.13
NDUFS3-212ENST00000534208 TMEM184AQ6ZMB5 413 aa22.14■■□□□ 1.13
NDUFS3-212ENST00000534208 VN1R2Q8NFZ6 395 aa22.14■■□□□ 1.13
NDUFS3-212ENST00000534208 HELQQ8TDG4 1101 aa22.14■■□□□ 1.13
NDUFS3-212ENST00000534208 SLC7A3Q8WY07 619 aa22.14■■□□□ 1.13
NDUFS3-212ENST00000534208 FAM122AQ96E09 287 aa22.14■■□□□ 1.13
NDUFS3-212ENST00000534208 SKIP12755 728 aa22.13■■□□□ 1.13
NDUFS3-212ENST00000534208 NPEPPSP55786 919 aa22.13■■□□□ 1.13
NDUFS3-212ENST00000534208 KCNC3Q14003 757 aa22.13■■□□□ 1.13
NDUFS3-212ENST00000534208 C4orf19Q8IY42 314 aa22.13■■□□□ 1.13
NDUFS3-212ENST00000534208 SLC39A11Q8N1S5 342 aa22.13■■□□□ 1.13
NDUFS3-212ENST00000534208 TNFRSF25Q93038 417 aa22.13■■□□□ 1.13
NDUFS3-212ENST00000534208 GTF3C6Q969F1 213 aa22.13■■□□□ 1.13
NDUFS3-212ENST00000534208 TCF25Q9BQ70 676 aa22.13■■□□□ 1.13
NDUFS3-212ENST00000534208 DHX33Q9H6R0 707 aaKnown RBP22.13■■□□□ 1.13
NDUFS3-212ENST00000534208 IFT122Q9HBG6 1241 aa22.13■■□□□ 1.13
NDUFS3-212ENST00000534208 ENTPD7Q9NQZ7 604 aa22.13■■□□□ 1.13
NDUFS3-212ENST00000534208 WRAP73Q9P2S5 460 aaPredicted RBP22.13■■□□□ 1.13
NDUFS3-212ENST00000534208 USP15Q9Y4E8 981 aaPredicted RBP22.13■■□□□ 1.13
NDUFS3-212ENST00000534208 DTNBO60941 627 aa22.12■■□□□ 1.13
NDUFS3-212ENST00000534208 ZNF623O75123 536 aa22.12■■□□□ 1.13
NDUFS3-212ENST00000534208 KRT2P35908 639 aa22.12■■□□□ 1.13
NDUFS3-212ENST00000534208 PBX3P40426 434 aa22.12■■□□□ 1.13
NDUFS3-212ENST00000534208 RFC5P40937 340 aa22.12■■□□□ 1.13
NDUFS3-212ENST00000534208 RAB27AP51159 221 aa22.12■■□□□ 1.13
NDUFS3-212ENST00000534208 SPIRE1Q08AE8 756 aa22.12■■□□□ 1.13
NDUFS3-212ENST00000534208 ME3Q16798 604 aa22.12■■□□□ 1.13
NDUFS3-212ENST00000534208 HERC4Q5GLZ8 1057 aaPredicted RBP22.12■■□□□ 1.13
NDUFS3-212ENST00000534208 PLPP4Q5VZY2 271 aa22.12■■□□□ 1.13
NDUFS3-212ENST00000534208 TWF2Q6IBS0 349 aaKnown RBP22.12■■□□□ 1.13
NDUFS3-212ENST00000534208 POTEDQ86YR6 584 aa22.12■■□□□ 1.13
NDUFS3-212ENST00000534208 KSR1Q8IVT5 923 aa22.12■■□□□ 1.13
NDUFS3-212ENST00000534208 SLFN12Q8IYM2 578 aa22.12■■□□□ 1.13
NDUFS3-212ENST00000534208 ZNF579Q8NAF0 562 aaKnown RBP22.12■■□□□ 1.13
NDUFS3-212ENST00000534208 CEP170P1Q96L14 293 aa22.12■■□□□ 1.13
NDUFS3-212ENST00000534208 NLRP4Q96MN2 994 aa22.12■■□□□ 1.13
NDUFS3-212ENST00000534208 LXNQ9BS40 222 aa22.12■■□□□ 1.13
NDUFS3-212ENST00000534208 BRMS1Q9HCU9 246 aa22.12■■□□□ 1.13
NDUFS3-212ENST00000534208 PIN4Q9Y237 131 aaKnown RBP22.12■■□□□ 1.13
NDUFS3-212ENST00000534208 COL4A3BPQ9Y5P4 624 aa22.12■■□□□ 1.13
NDUFS3-212ENST00000534208 MUC6Q6W4X9 2439 aa22.11■■□□□ 1.13
NDUFS3-212ENST00000534208 CARNS1A5YM72 827 aa22.11■■□□□ 1.13
NDUFS3-212ENST00000534208 SRGAP2BP0DMP2 458 aa22.11■■□□□ 1.13
NDUFS3-212ENST00000534208 RBM10P98175 930 aaKnown RBP22.11■■□□□ 1.13
NDUFS3-212ENST00000534208 NR5A1Q13285 461 aa22.11■■□□□ 1.13
NDUFS3-212ENST00000534208 CATSPER4Q7RTX7 472 aa22.11■■□□□ 1.13
NDUFS3-212ENST00000534208 RNF135Q8IUD6 432 aa22.11■■□□□ 1.13
NDUFS3-212ENST00000534208 NECAB1Q8N987 351 aa22.11■■□□□ 1.13
NDUFS3-212ENST00000534208 SUSD6Q92537 303 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms