RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 BHMT2Q9H2M3 363 aa14.87□□□□□ -0.03
CAPN1-227ENST00000533909 PTPRSQ13332 1948 aa14.86□□□□□ -0.03
CAPN1-227ENST00000533909 ERLIN2O94905 339 aa14.86□□□□□ -0.03
CAPN1-227ENST00000533909 CDC25AP30304 524 aa14.86□□□□□ -0.03
CAPN1-227ENST00000533909 UBA7P41226 1012 aa14.86□□□□□ -0.03
CAPN1-227ENST00000533909 CEBPZQ03701 1054 aaKnown RBP14.86□□□□□ -0.03
CAPN1-227ENST00000533909 RESTQ13127 1097 aa14.86□□□□□ -0.03
CAPN1-227ENST00000533909 IL17AQ16552 155 aa14.86□□□□□ -0.03
CAPN1-227ENST00000533909 TWF2Q6IBS0 349 aaKnown RBP14.86□□□□□ -0.03
CAPN1-227ENST00000533909 SRGAP1Q7Z6B7 1085 aa14.86□□□□□ -0.03
CAPN1-227ENST00000533909 RTN4RL1Q86UN2 441 aaPredicted RBP14.86□□□□□ -0.03
CAPN1-227ENST00000533909 AK8Q96MA6 479 aa14.86□□□□□ -0.03
CAPN1-227ENST00000533909 SAMD11Q96NU1 681 aa14.86□□□□□ -0.03
CAPN1-227ENST00000533909 NT5C3AQ9H0P0 336 aa14.86□□□□□ -0.03
CAPN1-227ENST00000533909 XPNPEP1Q9NQW7 623 aa14.86□□□□□ -0.03
CAPN1-227ENST00000533909 CHST12Q9NRB3 414 aa14.86□□□□□ -0.03
CAPN1-227ENST00000533909 MTMR6Q9Y217 621 aa14.86□□□□□ -0.03
CAPN1-227ENST00000533909 PIN4Q9Y237 131 aaKnown RBP14.86□□□□□ -0.03
CAPN1-227ENST00000533909 ADGRA3Q8IWK6 1321 aa14.86□□□□□ -0.03
CAPN1-227ENST00000533909 ARID2Q68CP9 1835 aa14.85□□□□□ -0.03
CAPN1-227ENST00000533909 LRRIQ4A6NIV6 560 aa14.85□□□□□ -0.03
CAPN1-227ENST00000533909 HOXA2O43364 376 aa14.85□□□□□ -0.03
CAPN1-227ENST00000533909 MGEA5O60502 916 aa14.85□□□□□ -0.03
CAPN1-227ENST00000533909 SSBP05455 408 aaKnown RBP eCLIP14.85□□□□□ -0.03
CAPN1-227ENST00000533909 PAN2Q504Q3 1202 aaKnown RBP14.85□□□□□ -0.03
CAPN1-227ENST00000533909 SPOUT1Q5T280 376 aaKnown RBP14.85□□□□□ -0.03
CAPN1-227ENST00000533909 ABI1Q8IZP0 508 aa14.85□□□□□ -0.03
CAPN1-227ENST00000533909 MICALL1Q8N3F8 863 aa14.85□□□□□ -0.03
CAPN1-227ENST00000533909 FBXO22Q8NEZ5 403 aa14.85□□□□□ -0.03
CAPN1-227ENST00000533909 MAFAQ8NHW3 353 aaPredicted RBP14.85□□□□□ -0.03
CAPN1-227ENST00000533909 SP7Q8TDD2 431 aaPredicted RBP14.85□□□□□ -0.03
CAPN1-227ENST00000533909 CALML4Q96GE6 196 aa14.85□□□□□ -0.03
CAPN1-227ENST00000533909 TMEM161AQ9NX61 479 aa14.85□□□□□ -0.03
CAPN1-227ENST00000533909 RWDD3Q9Y3V2 267 aa14.85□□□□□ -0.03
CAPN1-227ENST00000533909 TTC3P53804 2025 aa14.84□□□□□ -0.03
CAPN1-227ENST00000533909 C9IYK1 514 aa14.84□□□□□ -0.03
CAPN1-227ENST00000533909 INO80B-WBP1J3KQ70 363 aa14.84□□□□□ -0.03
CAPN1-227ENST00000533909 DGKIO75912 1065 aa14.84□□□□□ -0.03
CAPN1-227ENST00000533909 ARHGEF15O94989 841 aa14.84□□□□□ -0.03
CAPN1-227ENST00000533909 SKIP12755 728 aa14.84□□□□□ -0.03
CAPN1-227ENST00000533909 CYP11B2P19099 503 aa14.84□□□□□ -0.03
CAPN1-227ENST00000533909 CTNNB1P35222 781 aa14.84□□□□□ -0.03
CAPN1-227ENST00000533909 ERVK-21P61565 698 aa14.84□□□□□ -0.03
CAPN1-227ENST00000533909 BECN1Q14457 450 aa14.84□□□□□ -0.03
CAPN1-227ENST00000533909 PCBP1Q15365 356 aaKnown RBP eCLIP14.84□□□□□ -0.03
CAPN1-227ENST00000533909 FOXD4L5Q5VV16 416 aaPredicted RBP14.84□□□□□ -0.03
CAPN1-227ENST00000533909 CABP7Q86V35 215 aa14.84□□□□□ -0.03
CAPN1-227ENST00000533909 ZBTB8OSQ8IWT0 167 aa14.84□□□□□ -0.03
CAPN1-227ENST00000533909 CMTR2Q8IYT2 770 aaKnown RBP14.84□□□□□ -0.03
CAPN1-227ENST00000533909 ASAP3Q8TDY4 903 aa14.84□□□□□ -0.03
CAPN1-227ENST00000533909 FOXD4L4Q8WXT5 416 aaPredicted RBP14.84□□□□□ -0.03
CAPN1-227ENST00000533909 PPM1EQ8WY54 764 aa14.84□□□□□ -0.03
CAPN1-227ENST00000533909 IFT74Q96LB3 600 aa14.84□□□□□ -0.03
CAPN1-227ENST00000533909 ZNF396Q96N95 335 aaPredicted RBP14.84□□□□□ -0.03
CAPN1-227ENST00000533909 C17orf80Q9BSJ5 609 aa14.84□□□□□ -0.03
CAPN1-227ENST00000533909 IFT122Q9HBG6 1241 aa14.84□□□□□ -0.03
CAPN1-227ENST00000533909 TBKBP1A7MCY6 615 aa14.83□□□□□ -0.04
CAPN1-227ENST00000533909 E9PMD0 336 aa14.83□□□□□ -0.04
CAPN1-227ENST00000533909 RFXAPO00287 272 aa14.83□□□□□ -0.04
CAPN1-227ENST00000533909 EYA4O95677 639 aa14.83□□□□□ -0.04
CAPN1-227ENST00000533909 GLRA2P23416 452 aa14.83□□□□□ -0.04
CAPN1-227ENST00000533909 ARL2P36404 184 aa14.83□□□□□ -0.04
CAPN1-227ENST00000533909 LONP1P36776 959 aaKnown RBP14.83□□□□□ -0.04
CAPN1-227ENST00000533909 TXLNAP40222 546 aa14.83□□□□□ -0.04
CAPN1-227ENST00000533909 CAPSQ13938 189 aa14.83□□□□□ -0.04
CAPN1-227ENST00000533909 DSC3Q14574 896 aa14.83□□□□□ -0.04
CAPN1-227ENST00000533909 PPP2R5AQ15172 486 aa14.83□□□□□ -0.04
CAPN1-227ENST00000533909 ECM1Q16610 540 aa14.83□□□□□ -0.04
CAPN1-227ENST00000533909 TMEM132AQ24JP5 1023 aa14.83□□□□□ -0.04
CAPN1-227ENST00000533909 FAM173BQ6P4H8 233 aa14.83□□□□□ -0.04
CAPN1-227ENST00000533909 TMEM192Q8IY95 271 aa14.83□□□□□ -0.04
CAPN1-227ENST00000533909 KCTD17Q8N5Z5 321 aa14.83□□□□□ -0.04
CAPN1-227ENST00000533909 GDPD5Q8WTR4 605 aa14.83□□□□□ -0.04
CAPN1-227ENST00000533909 KIFAP3Q92845 792 aa14.83□□□□□ -0.04
CAPN1-227ENST00000533909 PLIN2Q99541 437 aa14.83□□□□□ -0.04
CAPN1-227ENST00000533909 ELAC1Q9H777 363 aaKnown RBP14.83□□□□□ -0.04
CAPN1-227ENST00000533909 GPRC5CQ9NQ84 441 aa14.83□□□□□ -0.04
CAPN1-227ENST00000533909 CLIC4Q9Y696 253 aa14.83□□□□□ -0.04
CAPN1-227ENST00000533909 SLC26A4O43511 780 aa14.82□□□□□ -0.04
CAPN1-227ENST00000533909 MARCKSP29966 332 aaPredicted RBP14.82□□□□□ -0.04
CAPN1-227ENST00000533909 RAB27AP51159 221 aa14.82□□□□□ -0.04
CAPN1-227ENST00000533909 PTENP60484 403 aa14.82□□□□□ -0.04
CAPN1-227ENST00000533909 FAM189BP81408 668 aa14.82□□□□□ -0.04
CAPN1-227ENST00000533909 POU5F1BQ06416 359 aa14.82□□□□□ -0.04
CAPN1-227ENST00000533909 STK38Q15208 465 aa14.82□□□□□ -0.04
CAPN1-227ENST00000533909 EPC2Q52LR7 807 aa14.82□□□□□ -0.04
CAPN1-227ENST00000533909 SPRED2Q7Z698 418 aa14.82□□□□□ -0.04
CAPN1-227ENST00000533909 ECHDC2Q86YB7 292 aa14.82□□□□□ -0.04
CAPN1-227ENST00000533909 DEPTORQ8TB45 409 aa14.82□□□□□ -0.04
CAPN1-227ENST00000533909 C2orf40Q9H1Z8 148 aa14.82□□□□□ -0.04
CAPN1-227ENST00000533909 AGPAT5Q9NUQ2 364 aa14.82□□□□□ -0.04
CAPN1-227ENST00000533909 A0A0U1RQF3 1178 aa14.81□□□□□ -0.04
CAPN1-227ENST00000533909 EPOPA6NHQ4 379 aa14.81□□□□□ -0.04
CAPN1-227ENST00000533909 EOMESO95936 686 aa14.81□□□□□ -0.04
CAPN1-227ENST00000533909 ZSCAN22P10073 491 aaPredicted RBP14.81□□□□□ -0.04
CAPN1-227ENST00000533909 FGFR1P11362 822 aa14.81□□□□□ -0.04
CAPN1-227ENST00000533909 LIG1P18858 919 aa14.81□□□□□ -0.04
CAPN1-227ENST00000533909 GATMP50440 423 aa14.81□□□□□ -0.04
CAPN1-227ENST00000533909 GRB10Q13322 594 aa14.81□□□□□ -0.04
CAPN1-227ENST00000533909 GPM6BQ13491 265 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms