RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 ABL1P00519 1130 aa13.14□□□□□ -0.31
BDNF-218ENST00000533246 BPIFB4P59827 614 aa13.14□□□□□ -0.31
BDNF-218ENST00000533246 TAF12Q16514 161 aa13.14□□□□□ -0.31
BDNF-218ENST00000533246 NAALADL2Q58DX5 795 aa13.14□□□□□ -0.31
BDNF-218ENST00000533246 SDCCAG8Q86SQ7 713 aaPredicted RBP13.14□□□□□ -0.31
BDNF-218ENST00000533246 RNF14Q9UBS8 474 aa13.14□□□□□ -0.31
BDNF-218ENST00000533246 ANAPC5Q9UJX4 755 aa13.14□□□□□ -0.31
BDNF-218ENST00000533246 PREX1Q8TCU6 1659 aa13.14□□□□□ -0.31
BDNF-218ENST00000533246 PLEKHG2Q9H7P9 1386 aa13.14□□□□□ -0.31
BDNF-218ENST00000533246 ZNF189O75820 626 aaPredicted RBP13.13□□□□□ -0.31
BDNF-218ENST00000533246 POLR2BP30876 1174 aaKnown RBP13.13□□□□□ -0.31
BDNF-218ENST00000533246 QARSP47897 775 aaKnown RBP13.13□□□□□ -0.31
BDNF-218ENST00000533246 ERVK-24P63145 666 aa13.13□□□□□ -0.31
BDNF-218ENST00000533246 CDO1Q16878 200 aa13.13□□□□□ -0.31
BDNF-218ENST00000533246 RASIP1Q5U651 963 aa13.13□□□□□ -0.31
BDNF-218ENST00000533246 PDXDC1Q6P996 788 aa13.13□□□□□ -0.31
BDNF-218ENST00000533246 TMEM270Q6UE05 265 aa13.13□□□□□ -0.31
BDNF-218ENST00000533246 PTF1AQ7RTS3 328 aa13.13□□□□□ -0.31
BDNF-218ENST00000533246 DPP9Q86TI2 863 aa13.13□□□□□ -0.31
BDNF-218ENST00000533246 STMN2Q93045 179 aa13.13□□□□□ -0.31
BDNF-218ENST00000533246 FAM167BQ9BTA0 163 aa13.13□□□□□ -0.31
BDNF-218ENST00000533246 KLC4Q9NSK0 619 aa13.13□□□□□ -0.31
BDNF-218ENST00000533246 PRR12Q9ULL5 1215 aa13.13□□□□□ -0.31
BDNF-218ENST00000533246 A0A087X0B3 334 aa13.13□□□□□ -0.31
BDNF-218ENST00000533246 GPR75-ASB3A0A0A6YYF3 556 aa13.13□□□□□ -0.31
BDNF-218ENST00000533246 HIP1RO75146 1068 aa13.13□□□□□ -0.31
BDNF-218ENST00000533246 BASP1P80723 227 aaKnown RBP13.13□□□□□ -0.31
BDNF-218ENST00000533246 PDIA5Q14554 519 aa13.13□□□□□ -0.31
BDNF-218ENST00000533246 GPR162Q16538 588 aa13.13□□□□□ -0.31
BDNF-218ENST00000533246 EMBQ6PCB8 327 aa13.13□□□□□ -0.31
BDNF-218ENST00000533246 GJB7Q6PEY0 223 aa13.13□□□□□ -0.31
BDNF-218ENST00000533246 NME8Q8N427 588 aa13.13□□□□□ -0.31
BDNF-218ENST00000533246 MSTO1Q9BUK6 570 aa13.13□□□□□ -0.31
BDNF-218ENST00000533246 FAM49AQ9H0Q0 323 aaPredicted RBP13.13□□□□□ -0.31
BDNF-218ENST00000533246 TMEM131LA2VDJ0 1609 aa13.13□□□□□ -0.31
BDNF-218ENST00000533246 DEPDC5O75140 1603 aa13.13□□□□□ -0.31
BDNF-218ENST00000533246 ANO9A1A5B4 782 aa13.13□□□□□ -0.31
BDNF-218ENST00000533246 USP11P51784 963 aa13.13□□□□□ -0.31
BDNF-218ENST00000533246 MTM1Q13496 603 aa13.13□□□□□ -0.31
BDNF-218ENST00000533246 FAM133BQ5BKY9 247 aaKnown RBP13.13□□□□□ -0.31
BDNF-218ENST00000533246 DNAJC24Q6P3W2 148 aa13.13□□□□□ -0.31
BDNF-218ENST00000533246 HAUS6Q7Z4H7 955 aa13.13□□□□□ -0.31
BDNF-218ENST00000533246 ADAM22Q9P0K1 906 aa13.13□□□□□ -0.31
BDNF-218ENST00000533246 NDC80O14777 642 aa13.12□□□□□ -0.31
BDNF-218ENST00000533246 RASGRF2O14827 1237 aa13.12□□□□□ -0.31
BDNF-218ENST00000533246 KRT1P04264 644 aa13.12□□□□□ -0.31
BDNF-218ENST00000533246 CCNHP51946 323 aaPredicted RBP13.12□□□□□ -0.31
BDNF-218ENST00000533246 PMS1P54277 932 aaKnown RBP13.12□□□□□ -0.31
BDNF-218ENST00000533246 SMAD1Q15797 465 aaKnown RBP13.12□□□□□ -0.31
BDNF-218ENST00000533246 BBS9Q3SYG4 887 aa13.12□□□□□ -0.31
BDNF-218ENST00000533246 CROCCP2Q86T23 111 aa13.12□□□□□ -0.31
BDNF-218ENST00000533246 DDX42Q86XP3 938 aaKnown RBP eCLIP13.12□□□□□ -0.31
BDNF-218ENST00000533246 SLC30A5Q8TAD4 765 aa13.12□□□□□ -0.31
BDNF-218ENST00000533246 NEK9Q8TD19 979 aa13.12□□□□□ -0.31
BDNF-218ENST00000533246 COG1Q8WTW3 980 aa13.12□□□□□ -0.31
BDNF-218ENST00000533246 SNX12Q9UMY4 172 aa13.12□□□□□ -0.31
BDNF-218ENST00000533246 RSPH10B2B2RC85 870 aa13.12□□□□□ -0.31
BDNF-218ENST00000533246 PPFIA2O75334 1257 aa13.12□□□□□ -0.31
BDNF-218ENST00000533246 RSPH10BP0C881 870 aa13.12□□□□□ -0.31
BDNF-218ENST00000533246 VAMP7P51809 220 aa13.12□□□□□ -0.31
BDNF-218ENST00000533246 NPEPPSP55786 919 aa13.12□□□□□ -0.31
BDNF-218ENST00000533246 SESN3P58005 492 aa13.12□□□□□ -0.31
BDNF-218ENST00000533246 ATP11AP98196 1134 aa13.12□□□□□ -0.31
BDNF-218ENST00000533246 CUL3Q13618 768 aa13.12□□□□□ -0.31
BDNF-218ENST00000533246 TMED2Q15363 201 aa13.12□□□□□ -0.31
BDNF-218ENST00000533246 DALRD3Q5D0E6 543 aaKnown RBP13.12□□□□□ -0.31
BDNF-218ENST00000533246 RFX6Q8HWS3 928 aa13.12□□□□□ -0.31
BDNF-218ENST00000533246 MTRQ99707 1265 aa13.12□□□□□ -0.31
BDNF-218ENST00000533246 C7orf25Q9BPX7 421 aa13.12□□□□□ -0.31
BDNF-218ENST00000533246 TMEM39BQ9GZU3 492 aa13.12□□□□□ -0.31
BDNF-218ENST00000533246 ZWILCHQ9H900 591 aa13.12□□□□□ -0.31
BDNF-218ENST00000533246 AGLP35573 1532 aa13.12□□□□□ -0.31
BDNF-218ENST00000533246 KLRC1P26715 233 aa13.12□□□□□ -0.31
BDNF-218ENST00000533246 HMGCS2P54868 508 aa13.12□□□□□ -0.31
BDNF-218ENST00000533246 EPC2Q52LR7 807 aa13.12□□□□□ -0.31
BDNF-218ENST00000533246 MIS18BP1Q6P0N0 1132 aa13.12□□□□□ -0.31
BDNF-218ENST00000533246 ACER1Q8TDN7 264 aa13.12□□□□□ -0.31
BDNF-218ENST00000533246 NGRNQ9NPE2 291 aaKnown RBP13.12□□□□□ -0.31
BDNF-218ENST00000533246 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.12□□□□□ -0.31
BDNF-218ENST00000533246 H0YCG3 227 aa13.11□□□□□ -0.31
BDNF-218ENST00000533246 GOLGA8MH3BSY2 632 aa13.11□□□□□ -0.31
BDNF-218ENST00000533246 P4HA1P13674 534 aa13.11□□□□□ -0.31
BDNF-218ENST00000533246 UCHL3P15374 230 aa13.11□□□□□ -0.31
BDNF-218ENST00000533246 ECE1P42892 770 aa13.11□□□□□ -0.31
BDNF-218ENST00000533246 USP4Q13107 963 aa13.11□□□□□ -0.31
BDNF-218ENST00000533246 RTKN2Q8IZC4 609 aa13.11□□□□□ -0.31
BDNF-218ENST00000533246 MORC4Q8TE76 937 aa13.11□□□□□ -0.31
BDNF-218ENST00000533246 PAIP2BQ9ULR5 123 aaKnown RBP13.11□□□□□ -0.31
BDNF-218ENST00000533246 VWDEQ8N2E2 1590 aa13.11□□□□□ -0.31
BDNF-218ENST00000533246 WDR64B1ANS9 1081 aa13.11□□□□□ -0.31
BDNF-218ENST00000533246 CYP26A1O43174 497 aa13.11□□□□□ -0.31
BDNF-218ENST00000533246 P4HBP07237 508 aaKnown RBP13.11□□□□□ -0.31
BDNF-218ENST00000533246 PSAPP07602 524 aa13.11□□□□□ -0.31
BDNF-218ENST00000533246 CCND2P30279 289 aa13.11□□□□□ -0.31
BDNF-218ENST00000533246 CCDC38Q502W7 563 aa13.11□□□□□ -0.31
BDNF-218ENST00000533246 DPY19L2Q6NUT2 758 aa13.11□□□□□ -0.31
BDNF-218ENST00000533246 GRK7Q8WTQ7 553 aa13.11□□□□□ -0.31
BDNF-218ENST00000533246 MED10Q9BTT4 135 aa13.11□□□□□ -0.31
BDNF-218ENST00000533246 KRT14P02533 472 aa13.11□□□□□ -0.31
BDNF-218ENST00000533246 GRIK5Q16478 980 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms