RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 NECTIN1Q15223 517 aa13.04□□□□□ -0.32
CMTM1-216ENST00000533078 CLLU1OSQ5K130 101 aa13.04□□□□□ -0.32
CMTM1-216ENST00000533078 TWF2Q6IBS0 349 aaKnown RBP13.04□□□□□ -0.32
CMTM1-216ENST00000533078 ELMSAN1Q6PJG2 1045 aa13.04□□□□□ -0.32
CMTM1-216ENST00000533078 GLB1LQ6UWU2 654 aa13.04□□□□□ -0.32
CMTM1-216ENST00000533078 DHX32Q7L7V1 743 aaKnown RBP13.04□□□□□ -0.32
CMTM1-216ENST00000533078 VPS52Q8N1B4 723 aa13.04□□□□□ -0.32
CMTM1-216ENST00000533078 FLCNQ8NFG4 579 aa13.04□□□□□ -0.32
CMTM1-216ENST00000533078 GCOM2Q9BZD3 368 aaPredicted RBP13.04□□□□□ -0.32
CMTM1-216ENST00000533078 INO80BQ9C086 356 aaPredicted RBP13.04□□□□□ -0.32
CMTM1-216ENST00000533078 ADAMTS10Q9H324 1103 aa13.04□□□□□ -0.32
CMTM1-216ENST00000533078 CHST12Q9NRB3 414 aa13.04□□□□□ -0.32
CMTM1-216ENST00000533078 LIMD1Q9UGP4 676 aa13.04□□□□□ -0.32
CMTM1-216ENST00000533078 SPTBN4Q9H254 2564 aa13.04□□□□□ -0.32
CMTM1-216ENST00000533078 FAM186AA6NE01 2351 aa13.03□□□□□ -0.32
CMTM1-216ENST00000533078 KLF18A0A0U1RQI7 1052 aa13.03□□□□□ -0.32
CMTM1-216ENST00000533078 ESYT2A0FGR8 921 aa13.03□□□□□ -0.32
CMTM1-216ENST00000533078 PRR23AA6NEV1 266 aa13.03□□□□□ -0.32
CMTM1-216ENST00000533078 NT5C1B-RDH14C9J2C7 533 aa13.03□□□□□ -0.32
CMTM1-216ENST00000533078 ASGR2P07307 311 aa13.03□□□□□ -0.32
CMTM1-216ENST00000533078 HMGB1P09429 215 aaKnown RBP13.03□□□□□ -0.32
CMTM1-216ENST00000533078 SFNP31947 248 aa13.03□□□□□ -0.32
CMTM1-216ENST00000533078 GPC3P51654 580 aa13.03□□□□□ -0.32
CMTM1-216ENST00000533078 JAK3P52333 1124 aa13.03□□□□□ -0.32
CMTM1-216ENST00000533078 PRKCEQ02156 737 aa13.03□□□□□ -0.32
CMTM1-216ENST00000533078 PFKFB3Q16875 520 aaPredicted RBP13.03□□□□□ -0.32
CMTM1-216ENST00000533078 CCDC149Q6ZUS6 474 aa13.03□□□□□ -0.32
CMTM1-216ENST00000533078 OTOP3Q7RTS5 596 aa13.03□□□□□ -0.32
CMTM1-216ENST00000533078 TMEM105Q8N8V8 129 aa13.03□□□□□ -0.32
CMTM1-216ENST00000533078 CCDC148Q8NFR7 591 aa13.03□□□□□ -0.32
CMTM1-216ENST00000533078 EMILIN2Q9BXX0 1053 aa13.03□□□□□ -0.32
CMTM1-216ENST00000533078 ZBP1Q9H171 429 aa13.03□□□□□ -0.32
CMTM1-216ENST00000533078 SFXN1Q9H9B4 322 aa13.03□□□□□ -0.32
CMTM1-216ENST00000533078 CYP26B1Q9NR63 512 aa13.03□□□□□ -0.32
CMTM1-216ENST00000533078 DISC1Q9NRI5 854 aa13.03□□□□□ -0.32
CMTM1-216ENST00000533078 RNF19AQ9NV58 838 aa13.03□□□□□ -0.32
CMTM1-216ENST00000533078 FBXL21Q9UKT6 434 aa13.03□□□□□ -0.32
CMTM1-216ENST00000533078 CHMP2AO43633 222 aa13.02□□□□□ -0.33
CMTM1-216ENST00000533078 GAS7O60861 476 aa13.02□□□□□ -0.33
CMTM1-216ENST00000533078 CTSAP10619 480 aa13.02□□□□□ -0.33
CMTM1-216ENST00000533078 RAB27AP51159 221 aa13.02□□□□□ -0.33
CMTM1-216ENST00000533078 FUT2Q10981 343 aa13.02□□□□□ -0.33
CMTM1-216ENST00000533078 ASCL5Q7RTU5 278 aa13.02□□□□□ -0.33
CMTM1-216ENST00000533078 DDX53Q86TM3 631 aaKnown RBP13.02□□□□□ -0.33
CMTM1-216ENST00000533078 URGCPQ8TCY9 931 aa13.02□□□□□ -0.33
CMTM1-216ENST00000533078 ZNF668Q96K58 619 aaPredicted RBP13.02□□□□□ -0.33
CMTM1-216ENST00000533078 JPH2Q9BR39 696 aaPredicted RBP13.02□□□□□ -0.33
CMTM1-216ENST00000533078 ZMYND12Q9H0C1 365 aa13.02□□□□□ -0.33
CMTM1-216ENST00000533078 DPP7Q9UHL4 492 aa13.02□□□□□ -0.33
CMTM1-216ENST00000533078 CDH22Q9UJ99 828 aa13.02□□□□□ -0.33
CMTM1-216ENST00000533078 WEE2P0C1S8 567 aa13.01□□□□□ -0.33
CMTM1-216ENST00000533078 PHKA2P46019 1235 aa13.01□□□□□ -0.33
CMTM1-216ENST00000533078 NONOQ15233 471 aaKnown RBP eCLIP13.01□□□□□ -0.33
CMTM1-216ENST00000533078 NOMO2Q5JPE7 1267 aa13.01□□□□□ -0.33
CMTM1-216ENST00000533078 TMC5Q6UXY8 1006 aa13.01□□□□□ -0.33
CMTM1-216ENST00000533078 ERMP1Q7Z2K6 904 aa13.01□□□□□ -0.33
CMTM1-216ENST00000533078 ZNF598Q86UK7 904 aaKnown RBP13.01□□□□□ -0.33
CMTM1-216ENST00000533078 LINC01465Q8N7H1 131 aa13.01□□□□□ -0.33
CMTM1-216ENST00000533078 C12orf76Q8N812 135 aaPredicted RBP13.01□□□□□ -0.33
CMTM1-216ENST00000533078 PGBD4Q96DM1 585 aa13.01□□□□□ -0.33
CMTM1-216ENST00000533078 IGSF21Q96ID5 467 aa13.01□□□□□ -0.33
CMTM1-216ENST00000533078 FAM193BQ96PV7 902 aaPredicted RBP13.01□□□□□ -0.33
CMTM1-216ENST00000533078 RTP3Q9BQQ7 232 aa13.01□□□□□ -0.33
CMTM1-216ENST00000533078 TEKT3Q9BXF9 490 aa13.01□□□□□ -0.33
CMTM1-216ENST00000533078 SEPT9Q9UHD8 586 aaPredicted RBP13.01□□□□□ -0.33
CMTM1-216ENST00000533078 BRPF3Q9ULD4 1205 aa13.01□□□□□ -0.33
CMTM1-216ENST00000533078 PIN4Q9Y237 131 aaKnown RBP13.01□□□□□ -0.33
CMTM1-216ENST00000533078 INPP5FQ9Y2H2 1132 aa13.01□□□□□ -0.33
CMTM1-216ENST00000533078 IRAK3Q9Y616 596 aa13.01□□□□□ -0.33
CMTM1-216ENST00000533078 PLXNA3P51805 1871 aa13.01□□□□□ -0.33
CMTM1-216ENST00000533078 WDR87Q6ZQQ6 2873 aa13.01□□□□□ -0.33
CMTM1-216ENST00000533078 STK25O00506 426 aa13□□□□□ -0.33
CMTM1-216ENST00000533078 EPCAMP16422 314 aa13□□□□□ -0.33
CMTM1-216ENST00000533078 FGFR4P22455 802 aa13□□□□□ -0.33
CMTM1-216ENST00000533078 KLRC2P26717 231 aa13□□□□□ -0.33
CMTM1-216ENST00000533078 TDGQ13569 410 aa13□□□□□ -0.33
CMTM1-216ENST00000533078 COL9A3Q14050 684 aaPredicted RBP13□□□□□ -0.33
CMTM1-216ENST00000533078 MTERF2Q49AM1 385 aa13□□□□□ -0.33
CMTM1-216ENST00000533078 LRCH2Q5VUJ6 765 aa13□□□□□ -0.33
CMTM1-216ENST00000533078 CATSPER4Q7RTX7 472 aa13□□□□□ -0.33
CMTM1-216ENST00000533078 FRMD5Q7Z6J6 570 aa13□□□□□ -0.33
CMTM1-216ENST00000533078 ZNF410Q86VK4 478 aa13□□□□□ -0.33
CMTM1-216ENST00000533078 RDM1Q8NG50 284 aa13□□□□□ -0.33
CMTM1-216ENST00000533078 CRYGNQ8WXF5 182 aa13□□□□□ -0.33
CMTM1-216ENST00000533078 AUTS2Q8WXX7 1259 aa13□□□□□ -0.33
CMTM1-216ENST00000533078 STAMQ92783 540 aa13□□□□□ -0.33
CMTM1-216ENST00000533078 TCEANC2Q96MN5 208 aa13□□□□□ -0.33
CMTM1-216ENST00000533078 RIT2Q99578 217 aa13□□□□□ -0.33
CMTM1-216ENST00000533078 C22orf23Q9BZE7 217 aa13□□□□□ -0.33
CMTM1-216ENST00000533078 GBP3Q9H0R5 595 aa13□□□□□ -0.33
CMTM1-216ENST00000533078 SSX2IPQ9Y2D8 614 aa13□□□□□ -0.33
CMTM1-216ENST00000533078 DCHS1Q96JQ0 3298 aa12.99□□□□□ -0.33
CMTM1-216ENST00000533078 ZNF862O60290 1169 aa12.99□□□□□ -0.33
CMTM1-216ENST00000533078 CDC27P30260 824 aa12.99□□□□□ -0.33
CMTM1-216ENST00000533078 CIITAP33076 1130 aa12.99□□□□□ -0.33
CMTM1-216ENST00000533078 ADD1P35611 737 aaKnown RBP12.99□□□□□ -0.33
CMTM1-216ENST00000533078 ID4P47928 161 aa12.99□□□□□ -0.33
CMTM1-216ENST00000533078 EXOSC10Q01780 885 aaKnown RBP12.99□□□□□ -0.33
CMTM1-216ENST00000533078 XKR3Q5GH77 459 aa12.99□□□□□ -0.33
CMTM1-216ENST00000533078 MIER3Q7Z3K6 550 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms