RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 FBXO22Q8NEZ5 403 aa14.42□□□□□ -0.1
TRAPPC4-212ENST00000533058 SH2D3AQ9BRG2 576 aa14.42□□□□□ -0.1
TRAPPC4-212ENST00000533058 GCOM2Q9BZD3 368 aaPredicted RBP14.42□□□□□ -0.1
TRAPPC4-212ENST00000533058 CHST12Q9NRB3 414 aa14.42□□□□□ -0.1
TRAPPC4-212ENST00000533058 SUCLA2Q9P2R7 463 aaPredicted RBP14.42□□□□□ -0.1
TRAPPC4-212ENST00000533058 PCDHB7Q9Y5E2 793 aa14.42□□□□□ -0.1
TRAPPC4-212ENST00000533058 SPTLC2O15270 562 aa14.41□□□□□ -0.1
TRAPPC4-212ENST00000533058 ASAP2O43150 1006 aa14.41□□□□□ -0.1
TRAPPC4-212ENST00000533058 ZSCAN20P17040 1043 aaPredicted RBP14.41□□□□□ -0.1
TRAPPC4-212ENST00000533058 BMPR1AP36894 532 aa14.41□□□□□ -0.1
TRAPPC4-212ENST00000533058 CCT6AP40227 531 aaKnown RBP14.41□□□□□ -0.1
TRAPPC4-212ENST00000533058 NASPP49321 788 aaPredicted RBP14.41□□□□□ -0.1
TRAPPC4-212ENST00000533058 BTG3Q14201 252 aaPredicted RBP14.41□□□□□ -0.1
TRAPPC4-212ENST00000533058 CTTNQ14247 550 aaKnown RBP14.41□□□□□ -0.1
TRAPPC4-212ENST00000533058 PDIA5Q14554 519 aa14.41□□□□□ -0.1
TRAPPC4-212ENST00000533058 SLC39A14Q15043 492 aa14.41□□□□□ -0.1
TRAPPC4-212ENST00000533058 PTPAQ15257 358 aa14.41□□□□□ -0.1
TRAPPC4-212ENST00000533058 KRT79Q5XKE5 535 aa14.41□□□□□ -0.1
TRAPPC4-212ENST00000533058 HAUS3Q68CZ6 603 aa14.41□□□□□ -0.1
TRAPPC4-212ENST00000533058 ZNF579Q8NAF0 562 aaKnown RBP14.41□□□□□ -0.1
TRAPPC4-212ENST00000533058 RASSF8Q8NHQ8 419 aa14.41□□□□□ -0.1
TRAPPC4-212ENST00000533058 SNX29Q8TEQ0 813 aa14.41□□□□□ -0.1
TRAPPC4-212ENST00000533058 GDPD5Q8WTR4 605 aa14.41□□□□□ -0.1
TRAPPC4-212ENST00000533058 ATXN2LQ8WWM7 1075 aaKnown RBP14.41□□□□□ -0.1
TRAPPC4-212ENST00000533058 TCP11Q8WWU5 503 aa14.41□□□□□ -0.1
TRAPPC4-212ENST00000533058 NLRP7Q8WX94 980 aa14.41□□□□□ -0.1
TRAPPC4-212ENST00000533058 PPP1R16BQ96T49 567 aa14.41□□□□□ -0.1
TRAPPC4-212ENST00000533058 TRAIPQ9BWF2 469 aa14.41□□□□□ -0.1
TRAPPC4-212ENST00000533058 PLVAPQ9BX97 442 aa14.41□□□□□ -0.1
TRAPPC4-212ENST00000533058 TUFT1Q9NNX1 390 aa14.41□□□□□ -0.1
TRAPPC4-212ENST00000533058 TMEM161AQ9NX61 479 aa14.41□□□□□ -0.1
TRAPPC4-212ENST00000533058 MTUS1Q9ULD2 1270 aa14.41□□□□□ -0.1
TRAPPC4-212ENST00000533058 STK24Q9Y6E0 443 aa14.41□□□□□ -0.1
TRAPPC4-212ENST00000533058 PRRC2BQ5JSZ5 2229 aaKnown RBP14.4□□□□□ -0.1
TRAPPC4-212ENST00000533058 A0A087WZ62 844 aa14.4□□□□□ -0.1
TRAPPC4-212ENST00000533058 DGAT1O75907 488 aa14.4□□□□□ -0.1
TRAPPC4-212ENST00000533058 YEATS4O95619 227 aa14.4□□□□□ -0.1
TRAPPC4-212ENST00000533058 MUTP22033 750 aa14.4□□□□□ -0.1
TRAPPC4-212ENST00000533058 ME1P48163 572 aa14.4□□□□□ -0.1
TRAPPC4-212ENST00000533058 POLGP54098 1239 aaPredicted RBP14.4□□□□□ -0.1
TRAPPC4-212ENST00000533058 POU5F1BQ06416 359 aa14.4□□□□□ -0.1
TRAPPC4-212ENST00000533058 IL17AQ16552 155 aa14.4□□□□□ -0.1
TRAPPC4-212ENST00000533058 PTPROQ16827 1216 aa14.4□□□□□ -0.1
TRAPPC4-212ENST00000533058 NAALADL2Q58DX5 795 aa14.4□□□□□ -0.1
TRAPPC4-212ENST00000533058 XKR9Q5GH70 373 aa14.4□□□□□ -0.1
TRAPPC4-212ENST00000533058 KRI1Q8N9T8 703 aaKnown RBP14.4□□□□□ -0.1
TRAPPC4-212ENST00000533058 LINC00301Q8NCQ3 95 aa14.4□□□□□ -0.1
TRAPPC4-212ENST00000533058 KCNG4Q8TDN1 519 aa14.4□□□□□ -0.1
TRAPPC4-212ENST00000533058 PSPC1Q8WXF1 523 aaKnown RBP14.4□□□□□ -0.1
TRAPPC4-212ENST00000533058 PPM1EQ8WY54 764 aa14.4□□□□□ -0.1
TRAPPC4-212ENST00000533058 P2RX5Q93086 422 aa14.4□□□□□ -0.1
TRAPPC4-212ENST00000533058 CDK5RAP3Q96JB5 506 aa14.4□□□□□ -0.1
TRAPPC4-212ENST00000533058 CHAMP1Q96JM3 812 aa14.4□□□□□ -0.1
TRAPPC4-212ENST00000533058 SPATA32Q96LK8 384 aa14.4□□□□□ -0.1
TRAPPC4-212ENST00000533058 CCDC43Q96MW1 224 aaKnown RBP14.4□□□□□ -0.1
TRAPPC4-212ENST00000533058 FDXACB1Q9BRP7 624 aaPredicted RBP14.4□□□□□ -0.1
TRAPPC4-212ENST00000533058 POLR3CQ9BUI4 534 aaPredicted RBP14.4□□□□□ -0.1
TRAPPC4-212ENST00000533058 LRFN2Q9ULH4 789 aa14.4□□□□□ -0.1
TRAPPC4-212ENST00000533058 A0A0C4DFX4 3053 aa14.39□□□□□ -0.11
TRAPPC4-212ENST00000533058 A0A0U1RQF3 1178 aa14.39□□□□□ -0.11
TRAPPC4-212ENST00000533058 PP2D1A8MPX8 630 aa14.39□□□□□ -0.11
TRAPPC4-212ENST00000533058 HOXA2O43364 376 aa14.39□□□□□ -0.11
TRAPPC4-212ENST00000533058 SPATA31C1P0DKV0 1188 aa14.39□□□□□ -0.11
TRAPPC4-212ENST00000533058 SFPQP23246 707 aaKnown RBP eCLIP14.39□□□□□ -0.11
TRAPPC4-212ENST00000533058 CDC25AP30304 524 aa14.39□□□□□ -0.11
TRAPPC4-212ENST00000533058 LONP1P36776 959 aaKnown RBP14.39□□□□□ -0.11
TRAPPC4-212ENST00000533058 GPM6BQ13491 265 aa14.39□□□□□ -0.11
TRAPPC4-212ENST00000533058 PCBP1Q15365 356 aaKnown RBP eCLIP14.39□□□□□ -0.11
TRAPPC4-212ENST00000533058 CCDC85BQ15834 202 aaPredicted RBP14.39□□□□□ -0.11
TRAPPC4-212ENST00000533058 TPRNQ4KMQ1 711 aa14.39□□□□□ -0.11
TRAPPC4-212ENST00000533058 SRGAP1Q7Z6B7 1085 aa14.39□□□□□ -0.11
TRAPPC4-212ENST00000533058 CATSPER3Q86XQ3 398 aa14.39□□□□□ -0.11
TRAPPC4-212ENST00000533058 RHPN2Q8IUC4 686 aa14.39□□□□□ -0.11
TRAPPC4-212ENST00000533058 IGSF22Q8N9C0 903 aa14.39□□□□□ -0.11
TRAPPC4-212ENST00000533058 PRPF31Q8WWY3 499 aaKnown RBP14.39□□□□□ -0.11
TRAPPC4-212ENST00000533058 RSPH1Q8WYR4 309 aa14.39□□□□□ -0.11
TRAPPC4-212ENST00000533058 MRPL38Q96DV4 380 aaKnown RBP14.39□□□□□ -0.11
TRAPPC4-212ENST00000533058 SCLT1Q96NL6 688 aa14.39□□□□□ -0.11
TRAPPC4-212ENST00000533058 C11orf84Q9BUA3 381 aaPredicted RBP14.39□□□□□ -0.11
TRAPPC4-212ENST00000533058 LMAN2LQ9H0V9 348 aa14.39□□□□□ -0.11
TRAPPC4-212ENST00000533058 IFT122Q9HBG6 1241 aa14.39□□□□□ -0.11
TRAPPC4-212ENST00000533058 DACT1Q9NYF0 836 aa14.39□□□□□ -0.11
TRAPPC4-212ENST00000533058 THEGQ9P2T0 379 aa14.39□□□□□ -0.11
TRAPPC4-212ENST00000533058 COG5Q9UP83 839 aa14.39□□□□□ -0.11
TRAPPC4-212ENST00000533058 SRPRBQ9Y5M8 271 aaKnown RBP14.39□□□□□ -0.11
TRAPPC4-212ENST00000533058 COL4A3BPQ9Y5P4 624 aa14.39□□□□□ -0.11
TRAPPC4-212ENST00000533058 ZBTB39O15060 712 aa14.38□□□□□ -0.11
TRAPPC4-212ENST00000533058 EOMESO95936 686 aa14.38□□□□□ -0.11
TRAPPC4-212ENST00000533058 RPA1P27694 616 aa14.38□□□□□ -0.11
TRAPPC4-212ENST00000533058 UBA7P41226 1012 aa14.38□□□□□ -0.11
TRAPPC4-212ENST00000533058 RARRES1P49788 294 aa14.38□□□□□ -0.11
TRAPPC4-212ENST00000533058 GRIN1Q05586 938 aa14.38□□□□□ -0.11
TRAPPC4-212ENST00000533058 MXD4Q14582 209 aaPredicted RBP14.38□□□□□ -0.11
TRAPPC4-212ENST00000533058 EMC2Q15006 297 aa14.38□□□□□ -0.11
TRAPPC4-212ENST00000533058 SPECC1Q5M775 1068 aa14.38□□□□□ -0.11
TRAPPC4-212ENST00000533058 AK8Q96MA6 479 aa14.38□□□□□ -0.11
TRAPPC4-212ENST00000533058 CLIC6Q96NY7 704 aa14.38□□□□□ -0.11
TRAPPC4-212ENST00000533058 NACC1Q96RE7 527 aa14.38□□□□□ -0.11
TRAPPC4-212ENST00000533058 MTRQ99707 1265 aa14.38□□□□□ -0.11
TRAPPC4-212ENST00000533058 CSRNP2Q9H175 543 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms