RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 RAB34Q9BZG1 259 aa17.12■□□□□ 0.33
CPSF1-210ENST00000532935 ATP6V0A4Q9HBG4 840 aa17.12■□□□□ 0.33
CPSF1-210ENST00000532935 IFT122Q9HBG6 1241 aa17.12■□□□□ 0.33
CPSF1-210ENST00000532935 MTCH2Q9Y6C9 303 aa17.12■□□□□ 0.33
CPSF1-210ENST00000532935 VPS37CA5D8V6 355 aaPredicted RBP17.11■□□□□ 0.33
CPSF1-210ENST00000532935 ASAP2O43150 1006 aa17.11■□□□□ 0.33
CPSF1-210ENST00000532935 SRGAP2CP0DJJ0 459 aa17.11■□□□□ 0.33
CPSF1-210ENST00000532935 MUTP22033 750 aa17.11■□□□□ 0.33
CPSF1-210ENST00000532935 CCT6AP40227 531 aaKnown RBP17.11■□□□□ 0.33
CPSF1-210ENST00000532935 ATP2C1P98194 919 aaPredicted RBP17.11■□□□□ 0.33
CPSF1-210ENST00000532935 CCDC85BQ15834 202 aaPredicted RBP17.11■□□□□ 0.33
CPSF1-210ENST00000532935 IL17AQ16552 155 aa17.11■□□□□ 0.33
CPSF1-210ENST00000532935 DTHD1Q6ZMT9 781 aa17.11■□□□□ 0.33
CPSF1-210ENST00000532935 FERMT3Q86UX7 667 aa17.11■□□□□ 0.33
CPSF1-210ENST00000532935 TMEM192Q8IY95 271 aa17.11■□□□□ 0.33
CPSF1-210ENST00000532935 CMTR2Q8IYT2 770 aaKnown RBP17.11■□□□□ 0.33
CPSF1-210ENST00000532935 PPM1EQ8WY54 764 aa17.11■□□□□ 0.33
CPSF1-210ENST00000532935 SNX21Q969T3 373 aa17.11■□□□□ 0.33
CPSF1-210ENST00000532935 DBR1Q9UK59 544 aaKnown RBP17.11■□□□□ 0.33
CPSF1-210ENST00000532935 STK24Q9Y6E0 443 aa17.11■□□□□ 0.33
CPSF1-210ENST00000532935 MYH15Q9Y2K3 1946 aa17.11■□□□□ 0.33
CPSF1-210ENST00000532935 USO1O60763 962 aaKnown RBP17.1■□□□□ 0.33
CPSF1-210ENST00000532935 LINC00271P0C7V0 271 aa17.1■□□□□ 0.33
CPSF1-210ENST00000532935 GATMP50440 423 aa17.1■□□□□ 0.33
CPSF1-210ENST00000532935 MXD4Q14582 209 aaPredicted RBP17.1■□□□□ 0.33
CPSF1-210ENST00000532935 ECM1Q16610 540 aa17.1■□□□□ 0.33
CPSF1-210ENST00000532935 PAN2Q504Q3 1202 aaKnown RBP17.1■□□□□ 0.33
CPSF1-210ENST00000532935 CATSPER4Q7RTX7 472 aa17.1■□□□□ 0.33
CPSF1-210ENST00000532935 BRAPQ7Z569 592 aa17.1■□□□□ 0.33
CPSF1-210ENST00000532935 MICALL1Q8N3F8 863 aa17.1■□□□□ 0.33
CPSF1-210ENST00000532935 RNF149Q8NC42 400 aa17.1■□□□□ 0.33
CPSF1-210ENST00000532935 CLP1Q92989 425 aaKnown RBP17.1■□□□□ 0.33
CPSF1-210ENST00000532935 ELAC1Q9H777 363 aaKnown RBP17.1■□□□□ 0.33
CPSF1-210ENST00000532935 CHST12Q9NRB3 414 aa17.1■□□□□ 0.33
CPSF1-210ENST00000532935 TMEM161AQ9NX61 479 aa17.1■□□□□ 0.33
CPSF1-210ENST00000532935 RWDD3Q9Y3V2 267 aa17.1■□□□□ 0.33
CPSF1-210ENST00000532935 XIRP2A4UGR9 3374 aa17.1■□□□□ 0.33
CPSF1-210ENST00000532935 CTNNB1P35222 781 aa17.09■□□□□ 0.33
CPSF1-210ENST00000532935 ARL2P36404 184 aa17.09■□□□□ 0.33
CPSF1-210ENST00000532935 FAM102BQ5T8I3 360 aa17.09■□□□□ 0.33
CPSF1-210ENST00000532935 SRGAP1Q7Z6B7 1085 aa17.09■□□□□ 0.33
CPSF1-210ENST00000532935 ECHDC2Q86YB7 292 aa17.09■□□□□ 0.33
CPSF1-210ENST00000532935 ASAP3Q8TDY4 903 aa17.09■□□□□ 0.33
CPSF1-210ENST00000532935 SNX29Q8TEQ0 813 aa17.09■□□□□ 0.33
CPSF1-210ENST00000532935 MINDY3Q9H8M7 445 aa17.09■□□□□ 0.33
CPSF1-210ENST00000532935 FOXD4L1Q9NU39 408 aa17.09■□□□□ 0.33
CPSF1-210ENST00000532935 DACT1Q9NYF0 836 aa17.09■□□□□ 0.33
CPSF1-210ENST00000532935 LMCD1Q9NZU5 365 aa17.09■□□□□ 0.33
CPSF1-210ENST00000532935 MRPL42Q9Y6G3 142 aaKnown RBP17.09■□□□□ 0.33
CPSF1-210ENST00000532935 MYH11P35749 1972 aa17.08■□□□□ 0.33
CPSF1-210ENST00000532935 PLXNA4Q9HCM2 1894 aa17.08■□□□□ 0.33
CPSF1-210ENST00000532935 ARHGEF35A5YM69 484 aa17.08■□□□□ 0.32
CPSF1-210ENST00000532935 TBKBP1A7MCY6 615 aa17.08■□□□□ 0.32
CPSF1-210ENST00000532935 PP2D1A8MPX8 630 aa17.08■□□□□ 0.32
CPSF1-210ENST00000532935 H3BNC9 293 aa17.08■□□□□ 0.32
CPSF1-210ENST00000532935 SYT1P21579 422 aa17.08■□□□□ 0.32
CPSF1-210ENST00000532935 BMPR1AP36894 532 aa17.08■□□□□ 0.32
CPSF1-210ENST00000532935 PHKA2P46019 1235 aa17.08■□□□□ 0.32
CPSF1-210ENST00000532935 GPM6BQ13491 265 aa17.08■□□□□ 0.32
CPSF1-210ENST00000532935 TFDP1Q14186 410 aa17.08■□□□□ 0.32
CPSF1-210ENST00000532935 KRT79Q5XKE5 535 aa17.08■□□□□ 0.32
CPSF1-210ENST00000532935 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.08■□□□□ 0.32
CPSF1-210ENST00000532935 MCPH1Q8NEM0 835 aa17.08■□□□□ 0.32
CPSF1-210ENST00000532935 POLR3FQ9H1D9 316 aaPredicted RBP17.08■□□□□ 0.32
CPSF1-210ENST00000532935 KIAA1024Q9UPX6 916 aa17.08■□□□□ 0.32
CPSF1-210ENST00000532935 PIN4Q9Y237 131 aaKnown RBP17.08■□□□□ 0.32
CPSF1-210ENST00000532935 MYO7AQ13402 2215 aa17.07■□□□□ 0.32
CPSF1-210ENST00000532935 A0A0U1RQF3 1178 aa17.07■□□□□ 0.32
CPSF1-210ENST00000532935 C5orf67F2Z3F1 127 aa17.07■□□□□ 0.32
CPSF1-210ENST00000532935 RB1P06400 928 aa17.07■□□□□ 0.32
CPSF1-210ENST00000532935 FGFR1P11362 822 aa17.07■□□□□ 0.32
CPSF1-210ENST00000532935 GLRA2P23416 452 aa17.07■□□□□ 0.32
CPSF1-210ENST00000532935 CDC25AP30304 524 aa17.07■□□□□ 0.32
CPSF1-210ENST00000532935 PTENP60484 403 aa17.07■□□□□ 0.32
CPSF1-210ENST00000532935 CAPSQ13938 189 aa17.07■□□□□ 0.32
CPSF1-210ENST00000532935 ARL6IP4Q66PJ3 421 aaKnown RBP17.07■□□□□ 0.32
CPSF1-210ENST00000532935 TWF2Q6IBS0 349 aaKnown RBP17.07■□□□□ 0.32
CPSF1-210ENST00000532935 PADI6Q6TGC4 694 aa17.07■□□□□ 0.32
CPSF1-210ENST00000532935 MAEAQ7L5Y9 396 aa17.07■□□□□ 0.32
CPSF1-210ENST00000532935 HSCBQ8IWL3 235 aa17.07■□□□□ 0.32
CPSF1-210ENST00000532935 MMTAG2Q9BU76 263 aaKnown RBP17.07■□□□□ 0.32
CPSF1-210ENST00000532935 GPRC5CQ9NQ84 441 aa17.07■□□□□ 0.32
CPSF1-210ENST00000532935 AGPAT5Q9NUQ2 364 aa17.07■□□□□ 0.32
CPSF1-210ENST00000532935 DDX19AQ9NUU7 478 aaKnown RBP17.07■□□□□ 0.32
CPSF1-210ENST00000532935 VCANP13611 3396 aa17.06■□□□□ 0.32
CPSF1-210ENST00000532935 VWA3AA6NCI4 1184 aa17.06■□□□□ 0.32
CPSF1-210ENST00000532935 HOXA2O43364 376 aa17.06■□□□□ 0.32
CPSF1-210ENST00000532935 EOMESO95936 686 aa17.06■□□□□ 0.32
CPSF1-210ENST00000532935 BMP15O95972 392 aa17.06■□□□□ 0.32
CPSF1-210ENST00000532935 CYP11B2P19099 503 aa17.06■□□□□ 0.32
CPSF1-210ENST00000532935 POU5F1BQ06416 359 aa17.06■□□□□ 0.32
CPSF1-210ENST00000532935 ZNF598Q86UK7 904 aaKnown RBP17.06■□□□□ 0.32
CPSF1-210ENST00000532935 IFNLR1Q8IU57 520 aaPredicted RBP17.06■□□□□ 0.32
CPSF1-210ENST00000532935 RNF169Q8NCN4 708 aa17.06■□□□□ 0.32
CPSF1-210ENST00000532935 C11orf84Q9BUA3 381 aaPredicted RBP17.06■□□□□ 0.32
CPSF1-210ENST00000532935 TRAIPQ9BWF2 469 aa17.06■□□□□ 0.32
CPSF1-210ENST00000532935 BHMT2Q9H2M3 363 aa17.06■□□□□ 0.32
CPSF1-210ENST00000532935 PRDM6Q9NQX0 595 aa17.06■□□□□ 0.32
CPSF1-210ENST00000532935 RNF19AQ9NV58 838 aa17.06■□□□□ 0.32
CPSF1-210ENST00000532935 ATF7P17544 494 aaPredicted RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms