RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 FERMT3Q86UX7 667 aa25.6■■□□□ 1.69
CAPN1-222ENST00000532285 RAB34Q9BZG1 259 aa25.6■■□□□ 1.69
CAPN1-222ENST00000532285 ATP6V0A4Q9HBG4 840 aa25.6■■□□□ 1.69
CAPN1-222ENST00000532285 IFT122Q9HBG6 1241 aa25.6■■□□□ 1.69
CAPN1-222ENST00000532285 CHST12Q9NRB3 414 aa25.6■■□□□ 1.69
CAPN1-222ENST00000532285 DACT1Q9NYF0 836 aa25.6■■□□□ 1.69
CAPN1-222ENST00000532285 LRWD1Q9UFC0 647 aa25.6■■□□□ 1.69
CAPN1-222ENST00000532285 A0A0C4DFX4 3053 aa25.6■■□□□ 1.69
CAPN1-222ENST00000532285 H3BNC9 293 aa25.59■■□□□ 1.69
CAPN1-222ENST00000532285 RB1P06400 928 aa25.59■■□□□ 1.69
CAPN1-222ENST00000532285 SRGAP2CP0DJJ0 459 aa25.59■■□□□ 1.69
CAPN1-222ENST00000532285 BMPR1AP36894 532 aa25.59■■□□□ 1.69
CAPN1-222ENST00000532285 PRPHP41219 470 aa25.59■■□□□ 1.69
CAPN1-222ENST00000532285 MXD4Q14582 209 aaPredicted RBP25.59■■□□□ 1.69
CAPN1-222ENST00000532285 HAUS3Q68CZ6 603 aa25.59■■□□□ 1.69
CAPN1-222ENST00000532285 XPNPEP1Q9NQW7 623 aa25.59■■□□□ 1.69
CAPN1-222ENST00000532285 DBR1Q9UK59 544 aaKnown RBP25.59■■□□□ 1.69
CAPN1-222ENST00000532285 STK24Q9Y6E0 443 aa25.59■■□□□ 1.69
CAPN1-222ENST00000532285 A0A087WWV3 80 aa25.58■■□□□ 1.69
CAPN1-222ENST00000532285 C5orf67F2Z3F1 127 aa25.58■■□□□ 1.69
CAPN1-222ENST00000532285 LINC00271P0C7V0 271 aa25.58■■□□□ 1.69
CAPN1-222ENST00000532285 PDCP20941 246 aa25.58■■□□□ 1.69
CAPN1-222ENST00000532285 CTNNB1P35222 781 aa25.58■■□□□ 1.69
CAPN1-222ENST00000532285 GPM6BQ13491 265 aa25.58■■□□□ 1.69
CAPN1-222ENST00000532285 PAN2Q504Q3 1202 aaKnown RBP25.58■■□□□ 1.69
CAPN1-222ENST00000532285 SRGAP1Q7Z6B7 1085 aa25.58■■□□□ 1.69
CAPN1-222ENST00000532285 IGSF22Q8N9C0 903 aa25.58■■□□□ 1.69
CAPN1-222ENST00000532285 GATMP50440 423 aa25.57■■□□□ 1.68
CAPN1-222ENST00000532285 FAM102BQ5T8I3 360 aa25.57■■□□□ 1.68
CAPN1-222ENST00000532285 CATSPER4Q7RTX7 472 aa25.57■■□□□ 1.68
CAPN1-222ENST00000532285 ECHDC2Q86YB7 292 aa25.57■■□□□ 1.68
CAPN1-222ENST00000532285 C11orf84Q9BUA3 381 aaPredicted RBP25.57■■□□□ 1.68
CAPN1-222ENST00000532285 PLVAPQ9BX97 442 aa25.57■■□□□ 1.68
CAPN1-222ENST00000532285 MRPL42Q9Y6G3 142 aaKnown RBP25.57■■□□□ 1.68
CAPN1-222ENST00000532285 A0A0U1RQF3 1178 aa25.56■■□□□ 1.68
CAPN1-222ENST00000532285 HOXA2O43364 376 aa25.56■■□□□ 1.68
CAPN1-222ENST00000532285 CCT6AP40227 531 aaKnown RBP25.56■■□□□ 1.68
CAPN1-222ENST00000532285 PTPROQ16827 1216 aa25.56■■□□□ 1.68
CAPN1-222ENST00000532285 POTEGQ6S5H5 508 aa25.56■■□□□ 1.68
CAPN1-222ENST00000532285 DTHD1Q6ZMT9 781 aa25.56■■□□□ 1.68
CAPN1-222ENST00000532285 RNF149Q8NC42 400 aa25.56■■□□□ 1.68
CAPN1-222ENST00000532285 INTS4Q96HW7 963 aaKnown RBP25.56■■□□□ 1.68
CAPN1-222ENST00000532285 TBKBP1A7MCY6 615 aa25.55■■□□□ 1.68
CAPN1-222ENST00000532285 EOMESO95936 686 aa25.55■■□□□ 1.68
CAPN1-222ENST00000532285 ARL2P36404 184 aa25.55■■□□□ 1.68
CAPN1-222ENST00000532285 PHKA2P46019 1235 aa25.55■■□□□ 1.68
CAPN1-222ENST00000532285 POU5F1BQ06416 359 aa25.55■■□□□ 1.68
CAPN1-222ENST00000532285 TFDP1Q14186 410 aa25.55■■□□□ 1.68
CAPN1-222ENST00000532285 BRAPQ7Z569 592 aa25.55■■□□□ 1.68
CAPN1-222ENST00000532285 MRPL38Q96DV4 380 aaKnown RBP25.55■■□□□ 1.68
CAPN1-222ENST00000532285 TRAIPQ9BWF2 469 aa25.55■■□□□ 1.68
CAPN1-222ENST00000532285 PIN4Q9Y237 131 aaKnown RBP25.55■■□□□ 1.68
CAPN1-222ENST00000532285 K7ELQ4 463 aaPredicted RBP25.54■■□□□ 1.68
CAPN1-222ENST00000532285 USO1O60763 962 aaKnown RBP25.54■■□□□ 1.68
CAPN1-222ENST00000532285 ATP2C1P98194 919 aaPredicted RBP25.54■■□□□ 1.68
CAPN1-222ENST00000532285 NAALADL2Q58DX5 795 aa25.54■■□□□ 1.68
CAPN1-222ENST00000532285 TWF2Q6IBS0 349 aaKnown RBP25.54■■□□□ 1.68
CAPN1-222ENST00000532285 MCPH1Q8NEM0 835 aa25.54■■□□□ 1.68
CAPN1-222ENST00000532285 MINDY3Q9H8M7 445 aa25.54■■□□□ 1.68
CAPN1-222ENST00000532285 PRDM6Q9NQX0 595 aa25.54■■□□□ 1.68
CAPN1-222ENST00000532285 FGFR1P11362 822 aa25.53■■□□□ 1.68
CAPN1-222ENST00000532285 SKIP12755 728 aa25.53■■□□□ 1.68
CAPN1-222ENST00000532285 PTENP60484 403 aa25.53■■□□□ 1.68
CAPN1-222ENST00000532285 PCBP1Q15365 356 aaKnown RBP eCLIP25.53■■□□□ 1.68
CAPN1-222ENST00000532285 SKIV2LQ15477 1246 aaKnown RBP25.53■■□□□ 1.68
CAPN1-222ENST00000532285 IL17AQ16552 155 aa25.53■■□□□ 1.68
CAPN1-222ENST00000532285 KRT79Q5XKE5 535 aa25.53■■□□□ 1.68
CAPN1-222ENST00000532285 SNX29Q8TEQ0 813 aa25.53■■□□□ 1.68
CAPN1-222ENST00000532285 P2RX5Q93086 422 aa25.53■■□□□ 1.68
CAPN1-222ENST00000532285 TMEM117Q9H0C3 514 aa25.53■■□□□ 1.68
CAPN1-222ENST00000532285 AGPAT5Q9NUQ2 364 aa25.53■■□□□ 1.68
CAPN1-222ENST00000532285 ATG2AQ2TAZ0 1938 aa25.53■■□□□ 1.68
CAPN1-222ENST00000532285 VPS37CA5D8V6 355 aaPredicted RBP25.52■■□□□ 1.68
CAPN1-222ENST00000532285 ARHGEF35A5YM69 484 aa25.52■■□□□ 1.68
CAPN1-222ENST00000532285 ECM1Q16610 540 aa25.52■■□□□ 1.68
CAPN1-222ENST00000532285 ARL6IP4Q66PJ3 421 aaKnown RBP25.52■■□□□ 1.68
CAPN1-222ENST00000532285 ZNF598Q86UK7 904 aaKnown RBP25.52■■□□□ 1.68
CAPN1-222ENST00000532285 IFNLR1Q8IU57 520 aaPredicted RBP25.52■■□□□ 1.68
CAPN1-222ENST00000532285 ABI1Q8IZP0 508 aa25.52■■□□□ 1.68
CAPN1-222ENST00000532285 RNF169Q8NCN4 708 aa25.52■■□□□ 1.68
CAPN1-222ENST00000532285 ASAP3Q8TDY4 903 aa25.52■■□□□ 1.68
CAPN1-222ENST00000532285 LMAN2LQ9H0V9 348 aa25.52■■□□□ 1.68
CAPN1-222ENST00000532285 POLR3FQ9H1D9 316 aaPredicted RBP25.52■■□□□ 1.68
CAPN1-222ENST00000532285 THEGQ9P2T0 379 aa25.52■■□□□ 1.68
CAPN1-222ENST00000532285 KIAA1024Q9UPX6 916 aa25.52■■□□□ 1.68
CAPN1-222ENST00000532285 GLRA2P23416 452 aa25.51■■□□□ 1.67
CAPN1-222ENST00000532285 CAPSQ13938 189 aa25.51■■□□□ 1.67
CAPN1-222ENST00000532285 SPOUT1Q5T280 376 aaKnown RBP25.51■■□□□ 1.67
CAPN1-222ENST00000532285 PADI6Q6TGC4 694 aa25.51■■□□□ 1.67
CAPN1-222ENST00000532285 ATXN2LQ8WWM7 1075 aaKnown RBP25.51■■□□□ 1.67
CAPN1-222ENST00000532285 SNX21Q969T3 373 aa25.51■■□□□ 1.67
CAPN1-222ENST00000532285 CASD1Q96PB1 797 aa25.51■■□□□ 1.67
CAPN1-222ENST00000532285 NFKBIZQ9BYH8 718 aa25.51■■□□□ 1.67
CAPN1-222ENST00000532285 AAASQ9NRG9 546 aa25.51■■□□□ 1.67
CAPN1-222ENST00000532285 RNF19AQ9NV58 838 aa25.51■■□□□ 1.67
CAPN1-222ENST00000532285 RAB27AP51159 221 aa25.5■■□□□ 1.67
CAPN1-222ENST00000532285 MAEAQ7L5Y9 396 aa25.5■■□□□ 1.67
CAPN1-222ENST00000532285 PLXNA4Q9HCM2 1894 aa25.5■■□□□ 1.67
CAPN1-222ENST00000532285 FAM105AQ9NUU6 356 aa25.5■■□□□ 1.67
CAPN1-222ENST00000532285 DDX19AQ9NUU7 478 aaKnown RBP25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms