RNA–Protein interactions for RNA: ENST00000532078.1

DEPDC7-204, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-204ENST00000532078 COLGALT1Q8NBJ5 622 aa17.13■□□□□ 0.33
DEPDC7-204ENST00000532078 RDM1Q8NG50 284 aa17.13■□□□□ 0.33
DEPDC7-204ENST00000532078 ZDHHC16Q969W1 377 aa17.13■□□□□ 0.33
DEPDC7-204ENST00000532078 MSLNLQ96KJ4 702 aa17.13■□□□□ 0.33
DEPDC7-204ENST00000532078 SCLT1Q96NL6 688 aa17.13■□□□□ 0.33
DEPDC7-204ENST00000532078 TMEM117Q9H0C3 514 aa17.13■□□□□ 0.33
DEPDC7-204ENST00000532078 ADAMTS10Q9H324 1103 aa17.13■□□□□ 0.33
DEPDC7-204ENST00000532078 UNC45AQ9H3U1 944 aa17.13■□□□□ 0.33
DEPDC7-204ENST00000532078 TLR9Q9NR96 1032 aa17.13■□□□□ 0.33
DEPDC7-204ENST00000532078 EDIL3O43854 480 aa17.12■□□□□ 0.33
DEPDC7-204ENST00000532078 FGF18O76093 207 aa17.12■□□□□ 0.33
DEPDC7-204ENST00000532078 EYA4O95677 639 aa17.12■□□□□ 0.33
DEPDC7-204ENST00000532078 ZSCAN20P17040 1043 aaPredicted RBP17.12■□□□□ 0.33
DEPDC7-204ENST00000532078 EIF4BP23588 611 aaKnown RBP17.12■□□□□ 0.33
DEPDC7-204ENST00000532078 Q4G0T1 1027 aa17.12■□□□□ 0.33
DEPDC7-204ENST00000532078 PDE12Q6L8Q7 609 aaKnown RBP17.12■□□□□ 0.33
DEPDC7-204ENST00000532078 MIER3Q7Z3K6 550 aa17.12■□□□□ 0.33
DEPDC7-204ENST00000532078 BLIDQ8IZY5 108 aa17.12■□□□□ 0.33
DEPDC7-204ENST00000532078 DAGLBQ8NCG7 672 aa17.12■□□□□ 0.33
DEPDC7-204ENST00000532078 MICAL1Q8TDZ2 1067 aa17.12■□□□□ 0.33
DEPDC7-204ENST00000532078 ZNF274Q96GC6 653 aaPredicted RBP17.12■□□□□ 0.33
DEPDC7-204ENST00000532078 TM6SF1Q9BZW5 370 aa17.12■□□□□ 0.33
DEPDC7-204ENST00000532078 TLE6Q9H808 572 aa17.12■□□□□ 0.33
DEPDC7-204ENST00000532078 TYW1Q9NV66 732 aaKnown RBP17.12■□□□□ 0.33
DEPDC7-204ENST00000532078 TRIOO75962 3097 aa17.12■□□□□ 0.33
DEPDC7-204ENST00000532078 ARHGAP33O14559 1287 aa17.11■□□□□ 0.33
DEPDC7-204ENST00000532078 PSMD10O75832 226 aa17.11■□□□□ 0.33
DEPDC7-204ENST00000532078 GPC3P51654 580 aa17.11■□□□□ 0.33
DEPDC7-204ENST00000532078 COASYQ13057 564 aa17.11■□□□□ 0.33
DEPDC7-204ENST00000532078 GALNT17Q6IS24 598 aa17.11■□□□□ 0.33
DEPDC7-204ENST00000532078 MOXD1Q6UVY6 613 aa17.11■□□□□ 0.33
DEPDC7-204ENST00000532078 RBM23Q86U06 439 aaKnown RBP17.11■□□□□ 0.33
DEPDC7-204ENST00000532078 ABI1Q8IZP0 508 aa17.11■□□□□ 0.33
DEPDC7-204ENST00000532078 LRRC43Q8N309 656 aa17.11■□□□□ 0.33
DEPDC7-204ENST00000532078 SMRP1Q8NCR6 262 aa17.11■□□□□ 0.33
DEPDC7-204ENST00000532078 CDCA3Q99618 268 aaPredicted RBP17.11■□□□□ 0.33
DEPDC7-204ENST00000532078 CWH43Q9H720 699 aa17.11■□□□□ 0.33
DEPDC7-204ENST00000532078 CLEC1BQ9P126 229 aa17.11■□□□□ 0.33
DEPDC7-204ENST00000532078 HCSTQ9UBK5 93 aa17.11■□□□□ 0.33
DEPDC7-204ENST00000532078 LZTS1Q9Y250 596 aa17.11■□□□□ 0.33
DEPDC7-204ENST00000532078 PCDHGC5Q9Y5F6 944 aa17.11■□□□□ 0.33
DEPDC7-204ENST00000532078 PCDHGA10Q9Y5H3 936 aa17.11■□□□□ 0.33
DEPDC7-204ENST00000532078 CYP3A7-CYP3A51PA0A087WV96 503 aa17.1■□□□□ 0.33
DEPDC7-204ENST00000532078 TDP2O95551 362 aa17.1■□□□□ 0.33
DEPDC7-204ENST00000532078 GLP2RO95838 553 aa17.1■□□□□ 0.33
DEPDC7-204ENST00000532078 DARSP14868 501 aaKnown RBP17.1■□□□□ 0.33
DEPDC7-204ENST00000532078 CYP3A7P24462 503 aa17.1■□□□□ 0.33
DEPDC7-204ENST00000532078 PPM1AP35813 382 aa17.1■□□□□ 0.33
DEPDC7-204ENST00000532078 XKR3Q5GH77 459 aa17.1■□□□□ 0.33
DEPDC7-204ENST00000532078 NLRP7Q8WX94 980 aa17.1■□□□□ 0.33
DEPDC7-204ENST00000532078 DDX12PQ92771 950 aa17.1■□□□□ 0.33
DEPDC7-204ENST00000532078 GJA10Q969M2 543 aa17.1■□□□□ 0.33
DEPDC7-204ENST00000532078 SEPT9Q9UHD8 586 aaPredicted RBP17.1■□□□□ 0.33
DEPDC7-204ENST00000532078 BARX2Q9UMQ3 279 aaPredicted RBP17.1■□□□□ 0.33
DEPDC7-204ENST00000532078 MUC6Q6W4X9 2439 aa17.09■□□□□ 0.33
DEPDC7-204ENST00000532078 SRGAP2BP0DMP2 458 aa17.09■□□□□ 0.33
DEPDC7-204ENST00000532078 CDC42EP1Q00587 391 aa17.09■□□□□ 0.33
DEPDC7-204ENST00000532078 STK3Q13188 491 aa17.09■□□□□ 0.33
DEPDC7-204ENST00000532078 NONOQ15233 471 aaKnown RBP eCLIP17.09■□□□□ 0.33
DEPDC7-204ENST00000532078 TARBP2Q15633 366 aaKnown RBP17.09■□□□□ 0.33
DEPDC7-204ENST00000532078 KRT25Q7Z3Z0 450 aa17.09■□□□□ 0.33
DEPDC7-204ENST00000532078 ECHDC2Q86YB7 292 aa17.09■□□□□ 0.33
DEPDC7-204ENST00000532078 RNF169Q8NCN4 708 aa17.09■□□□□ 0.33
DEPDC7-204ENST00000532078 ETNPPLQ8TBG4 499 aa17.09■□□□□ 0.33
DEPDC7-204ENST00000532078 ZNF668Q96K58 619 aaPredicted RBP17.09■□□□□ 0.33
DEPDC7-204ENST00000532078 MBOAT7Q96N66 472 aa17.09■□□□□ 0.33
DEPDC7-204ENST00000532078 ZNF558Q96NG5 402 aa17.09■□□□□ 0.33
DEPDC7-204ENST00000532078 CASD1Q96PB1 797 aa17.09■□□□□ 0.33
DEPDC7-204ENST00000532078 EPAS1Q99814 870 aa17.09■□□□□ 0.33
DEPDC7-204ENST00000532078 NIFKQ9BYG3 293 aaKnown RBP17.09■□□□□ 0.33
DEPDC7-204ENST00000532078 RNF19AQ9NV58 838 aa17.09■□□□□ 0.33
DEPDC7-204ENST00000532078 DACT1Q9NYF0 836 aa17.09■□□□□ 0.33
DEPDC7-204ENST00000532078 PUF60Q9UHX1 559 aaKnown RBP17.09■□□□□ 0.33
DEPDC7-204ENST00000532078 M0R2N6 131 aa17.08■□□□□ 0.32
DEPDC7-204ENST00000532078 FSCN2O14926 492 aa17.08■□□□□ 0.32
DEPDC7-204ENST00000532078 CDKL5O76039 1030 aa17.08■□□□□ 0.32
DEPDC7-204ENST00000532078 DNM2P50570 870 aa17.08■□□□□ 0.32
DEPDC7-204ENST00000532078 PLCB3Q01970 1234 aa17.08■□□□□ 0.32
DEPDC7-204ENST00000532078 DUSP6Q16828 381 aa17.08■□□□□ 0.32
DEPDC7-204ENST00000532078 MTERF2Q49AM1 385 aa17.08■□□□□ 0.32
DEPDC7-204ENST00000532078 HERC4Q5GLZ8 1057 aaPredicted RBP17.08■□□□□ 0.32
DEPDC7-204ENST00000532078 B3GNT9Q6UX72 402 aa17.08■□□□□ 0.32
DEPDC7-204ENST00000532078 MRPS27Q92552 414 aaKnown RBP17.08■□□□□ 0.32
DEPDC7-204ENST00000532078 GCOM2Q9BZD3 368 aaPredicted RBP17.08■□□□□ 0.32
DEPDC7-204ENST00000532078 PDRG1Q9NUG6 133 aa17.08■□□□□ 0.32
DEPDC7-204ENST00000532078 DDX25Q9UHL0 483 aaKnown RBP17.08■□□□□ 0.32
DEPDC7-204ENST00000532078 USP15Q9Y4E8 981 aaPredicted RBP17.08■□□□□ 0.32
DEPDC7-204ENST00000532078 A0A0U1RQF3 1178 aa17.07■□□□□ 0.32
DEPDC7-204ENST00000532078 PER2O15055 1255 aa17.07■□□□□ 0.32
DEPDC7-204ENST00000532078 EOMESO95936 686 aa17.07■□□□□ 0.32
DEPDC7-204ENST00000532078 SFPQP23246 707 aaKnown RBP eCLIP17.07■□□□□ 0.32
DEPDC7-204ENST00000532078 ERVFC1P60507 584 aa17.07■□□□□ 0.32
DEPDC7-204ENST00000532078 LSM11P83369 360 aaKnown RBP eCLIP17.07■□□□□ 0.32
DEPDC7-204ENST00000532078 NPY5RQ15761 445 aa17.07■□□□□ 0.32
DEPDC7-204ENST00000532078 PLPP4Q5VZY2 271 aa17.07■□□□□ 0.32
DEPDC7-204ENST00000532078 KCNT2Q6UVM3 1135 aa17.07■□□□□ 0.32
DEPDC7-204ENST00000532078 RNF135Q8IUD6 432 aa17.07■□□□□ 0.32
DEPDC7-204ENST00000532078 AIFM3Q96NN9 605 aa17.07■□□□□ 0.32
DEPDC7-204ENST00000532078 MRPL9Q9BYD2 267 aaKnown RBP17.07■□□□□ 0.32
DEPDC7-204ENST00000532078 ENTPD7Q9NQZ7 604 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms