RNA–Protein interactions for RNA: ENST00000531990.1

CCS-207, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 868 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-207ENST00000531990 PPP2R5AQ15172 486 aa23.05■■□□□ 1.28
CCS-207ENST00000531990 RINT1Q6NUQ1 792 aa23.05■■□□□ 1.28
CCS-207ENST00000531990 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.05■■□□□ 1.28
CCS-207ENST00000531990 CCDC73Q6ZRK6 1079 aa23.05■■□□□ 1.28
CCS-207ENST00000531990 MYOCDQ8IZQ8 938 aa23.05■■□□□ 1.28
CCS-207ENST00000531990 ASAP3Q8TDY4 903 aa23.05■■□□□ 1.28
CCS-207ENST00000531990 IFT74Q96LB3 600 aa23.05■■□□□ 1.28
CCS-207ENST00000531990 TIPINQ9BVW5 301 aa23.05■■□□□ 1.28
CCS-207ENST00000531990 SCAND2PQ9GZW5 306 aaPredicted RBP23.05■■□□□ 1.28
CCS-207ENST00000531990 IFT122Q9HBG6 1241 aa23.05■■□□□ 1.28
CCS-207ENST00000531990 STK17AQ9UEE5 414 aa23.05■■□□□ 1.28
CCS-207ENST00000531990 CIZ1Q9ULV3 898 aaPredicted RBP23.05■■□□□ 1.28
CCS-207ENST00000531990 TCHHQ07283 1943 aa23.04■■□□□ 1.28
CCS-207ENST00000531990 PTPRSQ13332 1948 aa23.04■■□□□ 1.28
CCS-207ENST00000531990 DENND3A2RUS2 1198 aa23.04■■□□□ 1.28
CCS-207ENST00000531990 GRXCR1A8MXD5 290 aa23.04■■□□□ 1.28
CCS-207ENST00000531990 ENPP3O14638 875 aa23.04■■□□□ 1.28
CCS-207ENST00000531990 ZSCAN20P17040 1043 aaPredicted RBP23.04■■□□□ 1.28
CCS-207ENST00000531990 POU5F1BQ06416 359 aa23.04■■□□□ 1.28
CCS-207ENST00000531990 CAPSQ13938 189 aa23.04■■□□□ 1.28
CCS-207ENST00000531990 DHX8Q14562 1220 aaKnown RBP23.04■■□□□ 1.28
CCS-207ENST00000531990 RAB30Q15771 203 aa23.04■■□□□ 1.28
CCS-207ENST00000531990 FAM109BQ6ICB4 259 aaPredicted RBP23.04■■□□□ 1.28
CCS-207ENST00000531990 CATSPER4Q7RTX7 472 aa23.04■■□□□ 1.28
CCS-207ENST00000531990 HERC6Q8IVU3 1022 aa23.04■■□□□ 1.28
CCS-207ENST00000531990 LARP4BQ92615 738 aaKnown RBP23.04■■□□□ 1.28
CCS-207ENST00000531990 RAD54LQ92698 747 aa23.04■■□□□ 1.28
CCS-207ENST00000531990 DRC1Q96MC2 740 aa23.04■■□□□ 1.28
CCS-207ENST00000531990 ZBED2Q9BTP6 218 aa23.04■■□□□ 1.28
CCS-207ENST00000531990 RUSC1Q9BVN2 902 aa23.04■■□□□ 1.28
CCS-207ENST00000531990 MSRAQ9UJ68 235 aa23.04■■□□□ 1.28
CCS-207ENST00000531990 PCDHA7Q9UN72 937 aa23.04■■□□□ 1.28
CCS-207ENST00000531990 GBF1Q92538 1859 aa23.03■■□□□ 1.28
CCS-207ENST00000531990 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.03■■□□□ 1.28
CCS-207ENST00000531990 LRRIQ4A6NIV6 560 aa23.03■■□□□ 1.28
CCS-207ENST00000531990 RBAK-RBAKDNI3L0D1 243 aa23.03■■□□□ 1.28
CCS-207ENST00000531990 SOX1O00570 391 aaPredicted RBP23.03■■□□□ 1.28
CCS-207ENST00000531990 CSDE1O75534 798 aaKnown RBP23.03■■□□□ 1.28
CCS-207ENST00000531990 SLC12A3P55017 1021 aa23.03■■□□□ 1.28
CCS-207ENST00000531990 PTENP60484 403 aa23.03■■□□□ 1.28
CCS-207ENST00000531990 C1orf186Q6ZWK4 172 aa23.03■■□□□ 1.28
CCS-207ENST00000531990 LEO1Q8WVC0 666 aaPredicted RBP23.03■■□□□ 1.28
CCS-207ENST00000531990 TSPYL2Q9H2G4 693 aaPredicted RBP23.03■■□□□ 1.28
CCS-207ENST00000531990 TMX1Q9H3N1 280 aa23.03■■□□□ 1.28
CCS-207ENST00000531990 C1orf112Q9NSG2 853 aa23.03■■□□□ 1.28
CCS-207ENST00000531990 BLOC1S4Q9NUP1 217 aa23.03■■□□□ 1.28
CCS-207ENST00000531990 RNF216Q9NWF9 866 aaPredicted RBP23.03■■□□□ 1.28
CCS-207ENST00000531990 FGFR4P22455 802 aa23.02■■□□□ 1.28
CCS-207ENST00000531990 GUCY2CP25092 1073 aa23.02■■□□□ 1.28
CCS-207ENST00000531990 STAT6P42226 847 aa23.02■■□□□ 1.28
CCS-207ENST00000531990 PCBP1Q15365 356 aaKnown RBP eCLIP23.02■■□□□ 1.28
CCS-207ENST00000531990 AXDND1Q5T1B0 1012 aaPredicted RBP23.02■■□□□ 1.28
CCS-207ENST00000531990 GPBP1Q86WP2 473 aa23.02■■□□□ 1.28
CCS-207ENST00000531990 ZBTB8OSQ8IWT0 167 aa23.02■■□□□ 1.28
CCS-207ENST00000531990 ADAM2Q99965 735 aa23.02■■□□□ 1.28
CCS-207ENST00000531990 NFKBIZQ9BYH8 718 aa23.02■■□□□ 1.28
CCS-207ENST00000531990 FAM13BQ9NYF5 915 aa23.02■■□□□ 1.28
CCS-207ENST00000531990 MYH11P35749 1972 aa23.01■■□□□ 1.27
CCS-207ENST00000531990 INO80B-WBP1J3KQ70 363 aa23.01■■□□□ 1.27
CCS-207ENST00000531990 HIP1RO75146 1068 aa23.01■■□□□ 1.27
CCS-207ENST00000531990 ERLIN2O94905 339 aa23.01■■□□□ 1.27
CCS-207ENST00000531990 KRT18P05783 430 aaKnown RBP23.01■■□□□ 1.27
CCS-207ENST00000531990 NAMPTP43490 491 aa23.01■■□□□ 1.27
CCS-207ENST00000531990 FXR1P51114 621 aaKnown RBP eCLIP23.01■■□□□ 1.27
CCS-207ENST00000531990 NCBP1Q09161 790 aaKnown RBP23.01■■□□□ 1.27
CCS-207ENST00000531990 MCM6Q14566 821 aa23.01■■□□□ 1.27
CCS-207ENST00000531990 FAM117BQ6P1L5 589 aa23.01■■□□□ 1.27
CCS-207ENST00000531990 IFNLR1Q8IU57 520 aaPredicted RBP23.01■■□□□ 1.27
CCS-207ENST00000531990 DEPTORQ8TB45 409 aa23.01■■□□□ 1.27
CCS-207ENST00000531990 LINC01599Q8WXQ3 324 aa23.01■■□□□ 1.27
CCS-207ENST00000531990 LRCH3Q96II8 777 aa23.01■■□□□ 1.27
CCS-207ENST00000531990 PBX4Q9BYU1 374 aa23.01■■□□□ 1.27
CCS-207ENST00000531990 PANK2Q9BZ23 570 aa23.01■■□□□ 1.27
CCS-207ENST00000531990 C2orf40Q9H1Z8 148 aa23.01■■□□□ 1.27
CCS-207ENST00000531990 CHST12Q9NRB3 414 aa23.01■■□□□ 1.27
CCS-207ENST00000531990 RGS18Q9NS28 235 aa23.01■■□□□ 1.27
CCS-207ENST00000531990 DACT1Q9NYF0 836 aa23.01■■□□□ 1.27
CCS-207ENST00000531990 PCDHA11Q9Y5I1 949 aa23.01■■□□□ 1.27
CCS-207ENST00000531990 TLL1O43897 1013 aa23■■□□□ 1.27
CCS-207ENST00000531990 UPP2O95045 317 aa23■■□□□ 1.27
CCS-207ENST00000531990 GJB5O95377 273 aa23■■□□□ 1.27
CCS-207ENST00000531990 DNAJB2P25686 324 aa23■■□□□ 1.27
CCS-207ENST00000531990 RABGGTBP53611 331 aa23■■□□□ 1.27
CCS-207ENST00000531990 RAD51AP2Q09MP3 1159 aa23■■□□□ 1.27
CCS-207ENST00000531990 SHC4Q6S5L8 630 aa23■■□□□ 1.27
CCS-207ENST00000531990 SLC24A5Q71RS6 500 aa23■■□□□ 1.27
CCS-207ENST00000531990 RTN4RL1Q86UN2 441 aaPredicted RBP23■■□□□ 1.27
CCS-207ENST00000531990 PDILTQ8N807 584 aa23■■□□□ 1.27
CCS-207ENST00000531990 TOP1MTQ969P6 601 aa23■■□□□ 1.27
CCS-207ENST00000531990 CHAMP1Q96JM3 812 aa23■■□□□ 1.27
CCS-207ENST00000531990 MINDY3Q9H8M7 445 aa23■■□□□ 1.27
CCS-207ENST00000531990 C17orf75Q9HAS0 396 aa23■■□□□ 1.27
CCS-207ENST00000531990 POLD4Q9HCU8 107 aa23■■□□□ 1.27
CCS-207ENST00000531990 KCNG1Q9UIX4 513 aa23■■□□□ 1.27
CCS-207ENST00000531990 LRFN2Q9ULH4 789 aa23■■□□□ 1.27
CCS-207ENST00000531990 PIN4Q9Y237 131 aaKnown RBP23■■□□□ 1.27
CCS-207ENST00000531990 TTC3P53804 2025 aa22.99■■□□□ 1.27
CCS-207ENST00000531990 STAG3L1P0CL83 205 aa22.99■■□□□ 1.27
CCS-207ENST00000531990 PBX2P40425 430 aa22.99■■□□□ 1.27
CCS-207ENST00000531990 DMP1Q13316 513 aaPredicted RBP22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms