RNA–Protein interactions for RNA: ENST00000531900.1

GPATCH4-216, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-216ENST00000531900 MTRQ99707 1265 aa12.04□□□□□ -0.48
GPATCH4-216ENST00000531900 ELAC1Q9H777 363 aaKnown RBP12.04□□□□□ -0.48
GPATCH4-216ENST00000531900 ATP6V0A4Q9HBG4 840 aa12.04□□□□□ -0.48
GPATCH4-216ENST00000531900 GINS2Q9Y248 185 aa12.04□□□□□ -0.48
GPATCH4-216ENST00000531900 PRRC2BQ5JSZ5 2229 aaKnown RBP12.04□□□□□ -0.48
GPATCH4-216ENST00000531900 XIRP2A4UGR9 3374 aa12.04□□□□□ -0.48
GPATCH4-216ENST00000531900 A0A087WZ62 844 aa12.03□□□□□ -0.48
GPATCH4-216ENST00000531900 LINC01553A4QN01 128 aa12.03□□□□□ -0.48
GPATCH4-216ENST00000531900 EPOPA6NHQ4 379 aa12.03□□□□□ -0.48
GPATCH4-216ENST00000531900 MGEA5O60502 916 aa12.03□□□□□ -0.48
GPATCH4-216ENST00000531900 DGKIO75912 1065 aa12.03□□□□□ -0.48
GPATCH4-216ENST00000531900 CCT6AP40227 531 aaKnown RBP12.03□□□□□ -0.48
GPATCH4-216ENST00000531900 SARSP49591 514 aaKnown RBP12.03□□□□□ -0.48
GPATCH4-216ENST00000531900 LAMTOR4Q0VGL1 99 aa12.03□□□□□ -0.48
GPATCH4-216ENST00000531900 NFX1Q12986 1120 aaKnown RBP12.03□□□□□ -0.48
GPATCH4-216ENST00000531900 PTPAQ15257 358 aa12.03□□□□□ -0.48
GPATCH4-216ENST00000531900 ECM1Q16610 540 aa12.03□□□□□ -0.48
GPATCH4-216ENST00000531900 POTEGQ6S5H5 508 aa12.03□□□□□ -0.48
GPATCH4-216ENST00000531900 RHPN2Q8IUC4 686 aa12.03□□□□□ -0.48
GPATCH4-216ENST00000531900 NPAS4Q8IUM7 802 aa12.03□□□□□ -0.48
GPATCH4-216ENST00000531900 MCPH1Q8NEM0 835 aa12.03□□□□□ -0.48
GPATCH4-216ENST00000531900 NLRP7Q8WX94 980 aa12.03□□□□□ -0.48
GPATCH4-216ENST00000531900 TMEM143Q96AN5 459 aa12.03□□□□□ -0.48
GPATCH4-216ENST00000531900 ADAM2Q99965 735 aa12.03□□□□□ -0.48
GPATCH4-216ENST00000531900 FDXACB1Q9BRP7 624 aaPredicted RBP12.03□□□□□ -0.48
GPATCH4-216ENST00000531900 DAXXQ9UER7 740 aaPredicted RBP12.03□□□□□ -0.48
GPATCH4-216ENST00000531900 COG5Q9UP83 839 aa12.03□□□□□ -0.48
GPATCH4-216ENST00000531900 RALGAPA2Q2PPJ7 1873 aa12.03□□□□□ -0.48
GPATCH4-216ENST00000531900 FNDC1Q4ZHG4 1894 aaPredicted RBP12.03□□□□□ -0.48
GPATCH4-216ENST00000531900 MYH15Q9Y2K3 1946 aa12.02□□□□□ -0.49
GPATCH4-216ENST00000531900 VCANP13611 3396 aa12.02□□□□□ -0.49
GPATCH4-216ENST00000531900 A0A0U1RQF3 1178 aa12.02□□□□□ -0.49
GPATCH4-216ENST00000531900 RBAK-RBAKDNI3L0D1 243 aa12.02□□□□□ -0.49
GPATCH4-216ENST00000531900 UPP2O95045 317 aa12.02□□□□□ -0.49
GPATCH4-216ENST00000531900 LINC00271P0C7V0 271 aa12.02□□□□□ -0.49
GPATCH4-216ENST00000531900 STAG3L1P0CL83 205 aa12.02□□□□□ -0.49
GPATCH4-216ENST00000531900 CYP11B2P19099 503 aa12.02□□□□□ -0.49
GPATCH4-216ENST00000531900 SFPQP23246 707 aaKnown RBP eCLIP12.02□□□□□ -0.49
GPATCH4-216ENST00000531900 LONP1P36776 959 aaKnown RBP12.02□□□□□ -0.49
GPATCH4-216ENST00000531900 PTENP60484 403 aa12.02□□□□□ -0.49
GPATCH4-216ENST00000531900 SF3A1Q15459 793 aaKnown RBP12.02□□□□□ -0.49
GPATCH4-216ENST00000531900 PADI6Q6TGC4 694 aa12.02□□□□□ -0.49
GPATCH4-216ENST00000531900 KSR1Q8IVT5 923 aa12.02□□□□□ -0.49
GPATCH4-216ENST00000531900 SNX29Q8TEQ0 813 aa12.02□□□□□ -0.49
GPATCH4-216ENST00000531900 CLP1Q92989 425 aaKnown RBP12.02□□□□□ -0.49
GPATCH4-216ENST00000531900 SAMD11Q96NU1 681 aa12.02□□□□□ -0.49
GPATCH4-216ENST00000531900 YME1L1Q96TA2 773 aa12.02□□□□□ -0.49
GPATCH4-216ENST00000531900 NT5C3AQ9H0P0 336 aa12.02□□□□□ -0.49
GPATCH4-216ENST00000531900 TMEM161AQ9NX61 479 aa12.02□□□□□ -0.49
GPATCH4-216ENST00000531900 MTUS1Q9ULD2 1270 aa12.02□□□□□ -0.49
GPATCH4-216ENST00000531900 KIAA1024Q9UPX6 916 aa12.02□□□□□ -0.49
GPATCH4-216ENST00000531900 NLRC5Q86WI3 1866 aa12.02□□□□□ -0.49
GPATCH4-216ENST00000531900 MYO7AQ13402 2215 aa12.01□□□□□ -0.49
GPATCH4-216ENST00000531900 DENND3A2RUS2 1198 aa12.01□□□□□ -0.49
GPATCH4-216ENST00000531900 VWA3AA6NCI4 1184 aa12.01□□□□□ -0.49
GPATCH4-216ENST00000531900 TNFRSF10AO00220 468 aa12.01□□□□□ -0.49
GPATCH4-216ENST00000531900 ZNF623O75123 536 aa12.01□□□□□ -0.49
GPATCH4-216ENST00000531900 EYA4O95677 639 aa12.01□□□□□ -0.49
GPATCH4-216ENST00000531900 EOMESO95936 686 aa12.01□□□□□ -0.49
GPATCH4-216ENST00000531900 ZSCAN20P17040 1043 aaPredicted RBP12.01□□□□□ -0.49
GPATCH4-216ENST00000531900 GLRA2P23416 452 aa12.01□□□□□ -0.49
GPATCH4-216ENST00000531900 TFDP1Q14186 410 aa12.01□□□□□ -0.49
GPATCH4-216ENST00000531900 ZNF598Q86UK7 904 aaKnown RBP12.01□□□□□ -0.49
GPATCH4-216ENST00000531900 FBXO22Q8NEZ5 403 aa12.01□□□□□ -0.49
GPATCH4-216ENST00000531900 ADAMTS19Q8TE59 1207 aa12.01□□□□□ -0.49
GPATCH4-216ENST00000531900 RSPH1Q8WYR4 309 aa12.01□□□□□ -0.49
GPATCH4-216ENST00000531900 CCDC43Q96MW1 224 aaKnown RBP12.01□□□□□ -0.49
GPATCH4-216ENST00000531900 PPP1R16BQ96T49 567 aa12.01□□□□□ -0.49
GPATCH4-216ENST00000531900 DDX19AQ9NUU7 478 aaKnown RBP12.01□□□□□ -0.49
GPATCH4-216ENST00000531900 DACT1Q9NYF0 836 aa12.01□□□□□ -0.49
GPATCH4-216ENST00000531900 DNM3Q9UQ16 869 aa12.01□□□□□ -0.49
GPATCH4-216ENST00000531900 BRWD1Q9NSI6 2320 aa12.01□□□□□ -0.49
GPATCH4-216ENST00000531900 TTC28Q96AY4 2481 aa12□□□□□ -0.49
GPATCH4-216ENST00000531900 A0A087WWV3 80 aa12□□□□□ -0.49
GPATCH4-216ENST00000531900 PP2D1A8MPX8 630 aa12□□□□□ -0.49
GPATCH4-216ENST00000531900 C5orf67F2Z3F1 127 aa12□□□□□ -0.49
GPATCH4-216ENST00000531900 LPXNO60711 386 aa12□□□□□ -0.49
GPATCH4-216ENST00000531900 SRGAP2CP0DJJ0 459 aa12□□□□□ -0.49
GPATCH4-216ENST00000531900 CDC25AP30304 524 aa12□□□□□ -0.49
GPATCH4-216ENST00000531900 HOXA11P31270 313 aaPredicted RBP12□□□□□ -0.49
GPATCH4-216ENST00000531900 PHKA2P46019 1235 aa12□□□□□ -0.49
GPATCH4-216ENST00000531900 NASPP49321 788 aaPredicted RBP12□□□□□ -0.49
GPATCH4-216ENST00000531900 CAPSQ13938 189 aa12□□□□□ -0.49
GPATCH4-216ENST00000531900 SLC39A14Q15043 492 aa12□□□□□ -0.49
GPATCH4-216ENST00000531900 TMEM119Q4V9L6 283 aa12□□□□□ -0.49
GPATCH4-216ENST00000531900 CDCA2Q69YH5 1023 aaPredicted RBP12□□□□□ -0.49
GPATCH4-216ENST00000531900 SPRED2Q7Z698 418 aa12□□□□□ -0.49
GPATCH4-216ENST00000531900 CMTR2Q8IYT2 770 aaKnown RBP12□□□□□ -0.49
GPATCH4-216ENST00000531900 RNF149Q8NC42 400 aa12□□□□□ -0.49
GPATCH4-216ENST00000531900 ASAP3Q8TDY4 903 aa12□□□□□ -0.49
GPATCH4-216ENST00000531900 GDPD5Q8WTR4 605 aa12□□□□□ -0.49
GPATCH4-216ENST00000531900 HLA-CQ95604 372 aa12□□□□□ -0.49
GPATCH4-216ENST00000531900 NLRP4Q96MN2 994 aa12□□□□□ -0.49
GPATCH4-216ENST00000531900 PNMA5Q96PV4 448 aa12□□□□□ -0.49
GPATCH4-216ENST00000531900 UHRF1Q96T88 793 aaPredicted RBP12□□□□□ -0.49
GPATCH4-216ENST00000531900 CCSER1Q9C0I3 900 aa12□□□□□ -0.49
GPATCH4-216ENST00000531900 BHMT2Q9H2M3 363 aa12□□□□□ -0.49
GPATCH4-216ENST00000531900 MINDY3Q9H8M7 445 aa12□□□□□ -0.49
GPATCH4-216ENST00000531900 AGPAT5Q9NUQ2 364 aa12□□□□□ -0.49
GPATCH4-216ENST00000531900 KCND2Q9NZV8 630 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms